Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_J19
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69792-6|CAA93669.2| 398|Caenorhabditis elegans Hypothetical pr... 183 1e-46
Z69790-5|CAA93657.2| 398|Caenorhabditis elegans Hypothetical pr... 183 1e-46
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 29 2.9
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 29 2.9
Z48009-9|CAA88085.1| 329|Caenorhabditis elegans Hypothetical pr... 29 5.0
U53341-2|AAC69108.2| 645|Caenorhabditis elegans Hypothetical pr... 29 5.0
AL110478-12|CAM33509.1| 108|Caenorhabditis elegans Hypothetical... 29 5.0
AC024751-2|AAN39663.1| 272|Caenorhabditis elegans Hypothetical ... 29 5.0
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 8.7
Z46242-5|CAA86330.2| 364|Caenorhabditis elegans Hypothetical pr... 28 8.7
U19861-1|AAA97554.2| 364|Caenorhabditis elegans mab-21 protein ... 28 8.7
AF125971-1|AAD14769.2| 469|Caenorhabditis elegans Hypothetical ... 28 8.7
>Z69792-6|CAA93669.2| 398|Caenorhabditis elegans Hypothetical
protein F40E10.6 protein.
Length = 398
Score = 183 bits (446), Expect = 1e-46
Identities = 84/132 (63%), Positives = 106/132 (80%), Gaps = 1/132 (0%)
Frame = +2
Query: 392 FLQTRSAQVIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISL 571
F+++ SAQ +AG+ + AL IT QIYQHLR+Y+ P+EQRWIVRILFIVPIY SW+SL
Sbjct: 11 FIRSASAQGLAGLCTWAALLITSHQIYQHLRFYSCPAEQRWIVRILFIVPIYAFDSWLSL 70
Query: 572 LFFNGDSYYVYFFTVRDCYEAFVIYSFLSLCYEYLGGEGNIMSXLRGRPVR-ASCVNGTC 748
+FF+ D+ Y+YF ++RDCYEAFVIYSFLSLCYEYLGGE NIM+ +RG+P+R + + TC
Sbjct: 71 IFFS-DNVYIYFNSIRDCYEAFVIYSFLSLCYEYLGGESNIMAEIRGKPIRPTNYLTCTC 129
Query: 749 CLXGATYTIGFL 784
CL G YTI FL
Sbjct: 130 CLAGKQYTIEFL 141
>Z69790-5|CAA93657.2| 398|Caenorhabditis elegans Hypothetical
protein F40E10.6 protein.
Length = 398
Score = 183 bits (446), Expect = 1e-46
Identities = 84/132 (63%), Positives = 106/132 (80%), Gaps = 1/132 (0%)
Frame = +2
Query: 392 FLQTRSAQVIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISL 571
F+++ SAQ +AG+ + AL IT QIYQHLR+Y+ P+EQRWIVRILFIVPIY SW+SL
Sbjct: 11 FIRSASAQGLAGLCTWAALLITSHQIYQHLRFYSCPAEQRWIVRILFIVPIYAFDSWLSL 70
Query: 572 LFFNGDSYYVYFFTVRDCYEAFVIYSFLSLCYEYLGGEGNIMSXLRGRPVR-ASCVNGTC 748
+FF+ D+ Y+YF ++RDCYEAFVIYSFLSLCYEYLGGE NIM+ +RG+P+R + + TC
Sbjct: 71 IFFS-DNVYIYFNSIRDCYEAFVIYSFLSLCYEYLGGESNIMAEIRGKPIRPTNYLTCTC 129
Query: 749 CLXGATYTIGFL 784
CL G YTI FL
Sbjct: 130 CLAGKQYTIEFL 141
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
isoform b protein.
Length = 2692
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 371 KPLQEPIFLQTRSAQVIAGIFVF-TALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIY 547
K LQ+ + L+T ++ + +F +AL +T + +H+ W +PS + W R
Sbjct: 2438 KTLQK-LSLETEHLTLMQKLQLFESALSVTQGEDLRHVLWLKSPSSEVWFDRRTNYTRSV 2496
Query: 548 GCYSWISLLFFNGDSY 595
C S + + GD +
Sbjct: 2497 ACMSMVGYILGLGDRH 2512
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein 363,
isoform a protein.
Length = 2695
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 371 KPLQEPIFLQTRSAQVIAGIFVF-TALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIY 547
K LQ+ + L+T ++ + +F +AL +T + +H+ W +PS + W R
Sbjct: 2441 KTLQK-LSLETEHLTLMQKLQLFESALSVTQGEDLRHVLWLKSPSSEVWFDRRTNYTRSV 2499
Query: 548 GCYSWISLLFFNGDSY 595
C S + + GD +
Sbjct: 2500 ACMSMVGYILGLGDRH 2515
>Z48009-9|CAA88085.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.12 protein.
Length = 329
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -2
Query: 272 CFPFVIKCHR*STLHTYCTQIPSIFYTSTSYTI-RFDKTMVE*QLKHKL 129
CF F K ST+H Y + + S+F + S + +++KT+ E Q++ K+
Sbjct: 175 CFIFPKKSKARSTIHFYISTVVSLFNLAASVALNKYNKTL-EYQVRFKI 222
>U53341-2|AAC69108.2| 645|Caenorhabditis elegans Hypothetical
protein F49E10.4a protein.
Length = 645
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +2
Query: 338 QRISEIVHDVLKPLQEPIFLQTRSAQVIAGIFVFTALFITCQQIYQHLRWYTNPSEQ 508
Q +SEI + + PL E I+L+ V G+ + T + C+Q++ L W+T EQ
Sbjct: 62 QLVSEIPYTL--PLLEAIYLKCELRTVEDGLILPTKE-LCCEQLFCQLVWWTAFCEQ 115
>AL110478-12|CAM33509.1| 108|Caenorhabditis elegans Hypothetical
protein Y26D4A.17 protein.
Length = 108
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +2
Query: 491 TNPSEQRWIVRILFIVPIYGCYSWISLLFFNGDSYYVYFFTVRDCYE----AFVIYSFLS 658
T P + +I FI P +GC+ + +F + +Y+ +F+ +E +I +L
Sbjct: 19 TEPKTPIKLEKIKFI-PYFGCFEKVKKIFDKINQFYILYFSFLRFHELNHFPLIICIYLI 77
Query: 659 LCYEYL 676
+EY+
Sbjct: 78 FFFEYI 83
>AC024751-2|AAN39663.1| 272|Caenorhabditis elegans Hypothetical
protein Y18H1A.11 protein.
Length = 272
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 688 PFAPEVLVAQGQEAIDHERFITIPDGEEVNVVR 590
PF+ +V V + +EAID+ IT+ D NV R
Sbjct: 13 PFSDDVEVIKQREAIDYSTQITLEDAISGNVTR 45
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +3
Query: 471 TSICVGTQTHQSNVGSCESYLSSQYTAVTAGYLCSSSMETLTTFTSSPSGIVMKRS*SIA 650
T++ T T ++ + + TA T+ S++ ++ +T TSSPS + S
Sbjct: 305 TAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTT 364
Query: 651 SCPCATST 674
+ P TST
Sbjct: 365 TTPEITST 372
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +3
Query: 471 TSICVGTQTHQSNVGSCESYLSSQYTAVTAGYLCSSSMETLTTFTSSPSGIVMKRS*SIA 650
T++ T T ++ + + TA T+ S++ ++ +T TSSPS + S
Sbjct: 305 TAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTT 364
Query: 651 SCPCATST 674
+ P TST
Sbjct: 365 TTPEITST 372
>Z46242-5|CAA86330.2| 364|Caenorhabditis elegans Hypothetical
protein F35G12.6 protein.
Length = 364
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 323 VNITAQRISEIVHDVLKPL--QEPIFLQTRS 409
V T QRI+++V ++LK + QEP F+ T S
Sbjct: 27 VTKTVQRIAKVVQEILKEVEAQEPRFINTLS 57
>U19861-1|AAA97554.2| 364|Caenorhabditis elegans mab-21 protein
protein.
Length = 364
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 323 VNITAQRISEIVHDVLKPL--QEPIFLQTRS 409
V T QRI+++V ++LK + QEP F+ T S
Sbjct: 27 VTKTVQRIAKVVQEILKEVEAQEPRFINTLS 57
>AF125971-1|AAD14769.2| 469|Caenorhabditis elegans Hypothetical
protein Y4C6B.5 protein.
Length = 469
Score = 27.9 bits (59), Expect = 8.7
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 5/135 (3%)
Frame = +2
Query: 392 FLQTRSAQVIAGIFVF-TALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWIS 568
+ + Q A F F ++L + C + L + W ++I I+P GC +
Sbjct: 54 YYDDKDIQAAANHFYFISSLTLLCPSLVTTL--LLGAATDYWSIKIPLIIPYIGCI--LG 109
Query: 569 LLFFNGDSYY----VYFFTVRDCYEAFVIYSFLSLCYEYLGGEGNIMSXLRGRPVRASCV 736
+ + SY+ VYF + D + F+++ L G S LR R R + V
Sbjct: 110 TINYVFQSYFIHTSVYFLLISDALFG-LCGGFIAIISTTL-TYGVKTSMLRYRSYRIAGV 167
Query: 737 NGTCCLXGATYTIGF 781
G L G T+GF
Sbjct: 168 EGAIGLGG---TVGF 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,724,791
Number of Sequences: 27780
Number of extensions: 355239
Number of successful extensions: 1055
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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