Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_J19
(786 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g26740.2 68418.m03164 expressed protein contains Pfam profile... 97 1e-20
At5g26740.1 68418.m03163 expressed protein contains Pfam profile... 97 1e-20
At3g05940.1 68416.m00676 expressed protein contains Pfam profile... 94 8e-20
At1g23070.1 68414.m02884 hypothetical protein contains Pfam prof... 79 2e-15
At4g21570.1 68417.m03120 expressed protein contains Pfam profile... 70 2e-12
At1g11200.1 68414.m01283 expressed protein contains Pfam profile... 67 1e-11
At1g77220.1 68414.m08994 expressed protein contains Pfam profile... 64 8e-11
At4g38360.2 68417.m05424 expressed protein contains Pfam profile... 60 2e-09
At4g38360.1 68417.m05423 expressed protein contains Pfam profile... 60 2e-09
At5g21930.1 68418.m02545 ATPase E1-E2 type family protein / halo... 30 2.0
At3g04980.1 68416.m00541 DNAJ heat shock N-terminal domain-conta... 30 2.0
At4g16760.1 68417.m02531 acyl-CoA oxidase (ACX1) identical to ac... 29 2.6
At5g49580.1 68418.m06136 DNAJ heat shock N-terminal domain-conta... 29 3.5
>At5g26740.2 68418.m03164 expressed protein contains Pfam profile
PF03619: Domain of unknown function
Length = 422
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/117 (40%), Positives = 74/117 (63%)
Frame = +2
Query: 416 VIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISLLFFNGDSY 595
++A + A+ + IY+HL YT P+ QR+IVRI+F+VP+Y S++SL+
Sbjct: 11 IVAFLCTVGAIALAIFHIYRHLLNYTEPTYQRYIVRIIFMVPVYAFMSFLSLVLPKSS-- 68
Query: 596 YVYFFTVRDCYEAFVIYSFLSLCYEYLGGEGNIMSXLRGRPVRASCVNGTCCLXGAT 766
+YF ++R+ YEA+VIY+FLSLC ++GG G+++ L GR ++ S TCC T
Sbjct: 69 -IYFDSIREVYEAWVIYNFLSLCLAWVGGPGSVVLSLSGRSLKPSWSLMTCCFPPLT 124
>At5g26740.1 68418.m03163 expressed protein contains Pfam profile
PF03619: Domain of unknown function
Length = 422
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/117 (40%), Positives = 74/117 (63%)
Frame = +2
Query: 416 VIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISLLFFNGDSY 595
++A + A+ + IY+HL YT P+ QR+IVRI+F+VP+Y S++SL+
Sbjct: 11 IVAFLCTVGAIALAIFHIYRHLLNYTEPTYQRYIVRIIFMVPVYAFMSFLSLVLPKSS-- 68
Query: 596 YVYFFTVRDCYEAFVIYSFLSLCYEYLGGEGNIMSXLRGRPVRASCVNGTCCLXGAT 766
+YF ++R+ YEA+VIY+FLSLC ++GG G+++ L GR ++ S TCC T
Sbjct: 69 -IYFDSIREVYEAWVIYNFLSLCLAWVGGPGSVVLSLSGRSLKPSWSLMTCCFPPLT 124
>At3g05940.1 68416.m00676 expressed protein contains Pfam profile
PF03619: Domain of unknown function
Length = 422
Score = 94.3 bits (224), Expect = 8e-20
Identities = 45/113 (39%), Positives = 73/113 (64%)
Frame = +2
Query: 416 VIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISLLFFNGDSY 595
++A + A+ + IY+HL YT P QR+IVRI+F+VP+Y S+++L+
Sbjct: 11 ILAFLCTVGAIALALFHIYKHLLNYTEPIYQRYIVRIVFMVPVYALMSFLALVLPKSS-- 68
Query: 596 YVYFFTVRDCYEAFVIYSFLSLCYEYLGGEGNIMSXLRGRPVRASCVNGTCCL 754
+YF ++R+ YEA+VIY+FLSLC ++GG G+++ L GR ++ S TCC+
Sbjct: 69 -IYFNSIREVYEAWVIYNFLSLCLAWVGGPGSVVISLTGRSLKPSWHLMTCCI 120
>At1g23070.1 68414.m02884 hypothetical protein contains Pfam profile
PF03619: Domain of unknown function
Length = 414
Score = 79.4 bits (187), Expect = 2e-15
Identities = 39/88 (44%), Positives = 55/88 (62%)
Frame = +2
Query: 416 VIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISLLFFNGDSY 595
+I G F A+ ++ I QHLR+YTNP+EQ+WIV +LF+VP+Y S ISL + +
Sbjct: 18 IIGGSFATVAICLSLYSILQHLRFYTNPAEQKWIVSVLFMVPVYATESIISL---SNSKF 74
Query: 596 YVYFFTVRDCYEAFVIYSFLSLCYEYLG 679
+ +R+CYEAF +YSF S LG
Sbjct: 75 SLPCDILRNCYEAFALYSFGSYLVACLG 102
>At4g21570.1 68417.m03120 expressed protein contains Pfam profile
PF03619: Domain of unknown function
Length = 294
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Frame = +2
Query: 434 VFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISLLFFNG-DSYYVYFF 610
V L T Q + QHL + NP EQ+ I+ I+ + PIY S+I LL G ++++++
Sbjct: 21 VLLTLHFTIQLVSQHLFHWKNPKEQKAILIIVLMAPIYAVVSFIGLLEVKGSETFFLFLE 80
Query: 611 TVRDCYEAFVIYSFLSLCYEYLG---GEGNIMSXLRGRPVRAS 730
++++CYEA VI FL+L Y YL + + ++GR + S
Sbjct: 81 SIKECYEALVIAKFLALMYSYLNISMSKNILPDGIKGREIHHS 123
>At1g11200.1 68414.m01283 expressed protein contains Pfam profile
PF03619: Domain of unknown function
Length = 295
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +2
Query: 416 VIAGIF-VFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISLLFFNGDS 592
V+ +F V ++ T Q + QHL ++ P+EQR I+ I+ + P+Y S++ LL G
Sbjct: 14 VMGSVFCVLLSMHFTMQLVSQHLFYWKKPNEQRAILIIVLMAPVYAINSFVGLLDAKGSK 73
Query: 593 -YYVYFFTVRDCYEAFVIYSFLSLCYEYL 676
++++ V++CYEA VI FL+L Y Y+
Sbjct: 74 PFFMFLDAVKECYEALVIAKFLALMYSYV 102
>At1g77220.1 68414.m08994 expressed protein contains Pfam profile
PF03619: Domain of unknown function
Length = 484
Score = 64.5 bits (150), Expect = 8e-11
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Frame = +2
Query: 422 AGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISLLFFNGDSYYV 601
A +FV A+ + I++HL Y P EQ++++ ++ +VP+Y S++SL+ N ++ +
Sbjct: 46 ASVFVVIAILLPMYLIFEHLASYNQPEEQKFLIGLILMVPVYAVESFLSLV--NSEAAF- 102
Query: 602 YFFTVRDCYEAFVIYSFLSLCYEYLGGEGNIMSXLRGRPV---RASCVNGTC 748
+RDCYEAF +Y F L GE + + + V + GTC
Sbjct: 103 NCEVIRDCYEAFALYCFERYLIACLDGEERTIEFMEQQTVITQSTPLLEGTC 154
>At4g38360.2 68417.m05424 expressed protein contains Pfam profile
PF03619: Domain of unknown function
Length = 485
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/92 (33%), Positives = 50/92 (54%)
Frame = +2
Query: 410 AQVIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISLLFFNGD 589
A +AG F+ L ++ ++ HL Y NP EQ++++ ++ +VP Y S+ SL+
Sbjct: 20 ASFMAGAFLVLTLSLSLFLVFDHLSTYKNPEEQKFLIGVILMVPCYSIESFASLV---KP 76
Query: 590 SYYVYFFTVRDCYEAFVIYSFLSLCYEYLGGE 685
S V +RDCYE+F +Y F +GGE
Sbjct: 77 SISVDCGILRDCYESFAMYCFGRYLVACIGGE 108
>At4g38360.1 68417.m05423 expressed protein contains Pfam profile
PF03619: Domain of unknown function
Length = 304
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/92 (33%), Positives = 50/92 (54%)
Frame = +2
Query: 410 AQVIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVPIYGCYSWISLLFFNGD 589
A +AG F+ L ++ ++ HL Y NP EQ++++ ++ +VP Y S+ SL+
Sbjct: 20 ASFMAGAFLVLTLSLSLFLVFDHLSTYKNPEEQKFLIGVILMVPCYSIESFASLV---KP 76
Query: 590 SYYVYFFTVRDCYEAFVIYSFLSLCYEYLGGE 685
S V +RDCYE+F +Y F +GGE
Sbjct: 77 SISVDCGILRDCYESFAMYCFGRYLVACIGGE 108
>At5g21930.1 68418.m02545 ATPase E1-E2 type family protein /
haloacid dehalogenase-like hydrolase family protein /
heavy-metal-associated domain-containing protein
contains InterPro accession IPR001757: ATPase, E1-E2
type; contains Pfam profiles PF00403:
Heavy-metal-associated domain, PF00702: haloacid
dehalogenase-like hydrolase
Length = 883
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 396 CRPAARRSSREYSCSRLYSLLANRYTSICVGTQTHQSNVGSCESYLS 536
C P RRS CSR + L++N S+ + TQ+ +S S ES S
Sbjct: 28 CFPRLRRSRIRRHCSRPFFLVSN---SVEISTQSFESTESSIESVKS 71
>At3g04980.1 68416.m00541 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 1165
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 407 SAQVIAGIFVFTALFITCQQIYQHLRWYTNPS 502
+A+ IAG+F F C Q Y++LR Y N S
Sbjct: 137 AAENIAGVFTFWTRCRHCGQCYKYLREYMNTS 168
>At4g16760.1 68417.m02531 acyl-CoA oxidase (ACX1) identical to
acyl-CoA oxidase [Arabidopsis thaliana] GI:3044214
Length = 675
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 438 SRLYSLLANRYTSICVGTQTHQSNVGSCESYLSSQYTAVTAGYLCSSSMETLTTFTSSPS 617
+RL+ LLA+ Y VG E +S + + + C++ +++LTT T++
Sbjct: 332 NRLFPLLASAYAFRFVGEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTT-TATAD 390
Query: 618 GI 623
GI
Sbjct: 391 GI 392
>At5g49580.1 68418.m06136 DNAJ heat shock N-terminal
domain-containing protein contains similarity to S-locus
protein 5 GI:6069485 from [Brassica rapa]; contains Pfam
profile PF00226 DnaJ domain
Length = 695
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 507 CSDGFVYQRKCWYICWQVMNRAVNTNIPAMTCALRVCRNMGSCSGFS 367
C+D +Y+ WYIC Q M NT+ P+ + SG S
Sbjct: 585 CADSKIYEASQWYIC-QGMRCPANTHKPSFHVNMNATAAKRGTSGSS 630
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,421,701
Number of Sequences: 28952
Number of extensions: 310855
Number of successful extensions: 786
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1765546400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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