Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_J17
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004893-1|AAO47871.1|  541|Drosophila melanogaster RE51884p pro...   219   3e-57
AY069079-1|AAL39224.1|  541|Drosophila melanogaster GH09383p pro...   219   3e-57
AE014297-3582|AAN14008.1|  541|Drosophila melanogaster CG6668-PB...   219   3e-57
AE014297-3581|AAF56318.1|  541|Drosophila melanogaster CG6668-PA...   219   3e-57
Y11837-1|CAA72535.1|  729|Drosophila melanogaster bZIP transcrip...    29   7.1  
BT030402-1|ABO52821.1|  610|Drosophila melanogaster FI01009p pro...    29   7.1  
AY113444-1|AAM29449.1|  596|Drosophila melanogaster RE29005p pro...    29   7.1  
AE014134-906|AAN10539.1|  610|Drosophila melanogaster CG14029-PC...    29   7.1  
AE014134-905|AAF52237.1|  729|Drosophila melanogaster CG14029-PA...    29   7.1  
AY118582-1|AAM49951.1|  830|Drosophila melanogaster LD44094p pro...    28   9.4  
AE014296-3602|AAN12187.1|  830|Drosophila melanogaster CG11248-P...    28   9.4  
AE014296-3601|AAF51765.1|  830|Drosophila melanogaster CG11248-P...    28   9.4  
AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA...    28   9.4  
AE013599-3678|AAF47055.3|  181|Drosophila melanogaster CG13560-P...    28   9.4  

>BT004893-1|AAO47871.1|  541|Drosophila melanogaster RE51884p
           protein.
          Length = 541

 Score =  219 bits (535), Expect = 3e-57
 Identities = 106/146 (72%), Positives = 121/146 (82%)
 Frame = +3

Query: 204 EEALKSLLLKEDVRDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYXXXXXXXXXXXSEQ 383
           E+AL  +L++++V+DR V V+SVAGAFRKGKSFLLDFFLRYM+ KY            E 
Sbjct: 21  EDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHHDATDWLG-GES 79

Query: 384 DPLQGFSWRGGSERDTTGILMWSEIFKATLDDGEKVPIILLDTQGAFDSESTVRDCATVF 563
           DPL+GFSWRGGSERDTTGILMWS+IF     +G+K+ IILLDTQGAFDS+STVRDCATVF
Sbjct: 80  DPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGAFDSQSTVRDCATVF 139

Query: 564 ALSTMLSSVQIYNLSQNIQEDDLXHL 641
           ALSTMLSSVQIYNLSQNIQEDDL HL
Sbjct: 140 ALSTMLSSVQIYNLSQNIQEDDLQHL 165


>AY069079-1|AAL39224.1|  541|Drosophila melanogaster GH09383p
           protein.
          Length = 541

 Score =  219 bits (535), Expect = 3e-57
 Identities = 106/146 (72%), Positives = 121/146 (82%)
 Frame = +3

Query: 204 EEALKSLLLKEDVRDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYXXXXXXXXXXXSEQ 383
           E+AL  +L++++V+DR V V+SVAGAFRKGKSFLLDFFLRYM+ KY            E 
Sbjct: 21  EDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHHDATDWLG-GES 79

Query: 384 DPLQGFSWRGGSERDTTGILMWSEIFKATLDDGEKVPIILLDTQGAFDSESTVRDCATVF 563
           DPL+GFSWRGGSERDTTGILMWS+IF     +G+K+ IILLDTQGAFDS+STVRDCATVF
Sbjct: 80  DPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGAFDSQSTVRDCATVF 139

Query: 564 ALSTMLSSVQIYNLSQNIQEDDLXHL 641
           ALSTMLSSVQIYNLSQNIQEDDL HL
Sbjct: 140 ALSTMLSSVQIYNLSQNIQEDDLQHL 165


>AE014297-3582|AAN14008.1|  541|Drosophila melanogaster CG6668-PB,
           isoform B protein.
          Length = 541

 Score =  219 bits (535), Expect = 3e-57
 Identities = 106/146 (72%), Positives = 121/146 (82%)
 Frame = +3

Query: 204 EEALKSLLLKEDVRDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYXXXXXXXXXXXSEQ 383
           E+AL  +L++++V+DR V V+SVAGAFRKGKSFLLDFFLRYM+ KY            E 
Sbjct: 21  EDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHHDATDWLG-GES 79

Query: 384 DPLQGFSWRGGSERDTTGILMWSEIFKATLDDGEKVPIILLDTQGAFDSESTVRDCATVF 563
           DPL+GFSWRGGSERDTTGILMWS+IF     +G+K+ IILLDTQGAFDS+STVRDCATVF
Sbjct: 80  DPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGAFDSQSTVRDCATVF 139

Query: 564 ALSTMLSSVQIYNLSQNIQEDDLXHL 641
           ALSTMLSSVQIYNLSQNIQEDDL HL
Sbjct: 140 ALSTMLSSVQIYNLSQNIQEDDLQHL 165


>AE014297-3581|AAF56318.1|  541|Drosophila melanogaster CG6668-PA,
           isoform A protein.
          Length = 541

 Score =  219 bits (535), Expect = 3e-57
 Identities = 106/146 (72%), Positives = 121/146 (82%)
 Frame = +3

Query: 204 EEALKSLLLKEDVRDRAVVVISVAGAFRKGKSFLLDFFLRYMHYKYXXXXXXXXXXXSEQ 383
           E+AL  +L++++V+DR V V+SVAGAFRKGKSFLLDFFLRYM+ KY            E 
Sbjct: 21  EDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHHDATDWLG-GES 79

Query: 384 DPLQGFSWRGGSERDTTGILMWSEIFKATLDDGEKVPIILLDTQGAFDSESTVRDCATVF 563
           DPL+GFSWRGGSERDTTGILMWS+IF     +G+K+ IILLDTQGAFDS+STVRDCATVF
Sbjct: 80  DPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGAFDSQSTVRDCATVF 139

Query: 564 ALSTMLSSVQIYNLSQNIQEDDLXHL 641
           ALSTMLSSVQIYNLSQNIQEDDL HL
Sbjct: 140 ALSTMLSSVQIYNLSQNIQEDDLQHL 165


>Y11837-1|CAA72535.1|  729|Drosophila melanogaster bZIP
           transcription factor protein.
          Length = 729

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 370 SVANRTPSRASAGEGAPRGTRPAYSCGPRYS 462
           S +  +PS + +GEG+P+G    Y  GP  S
Sbjct: 330 SSSGSSPSGSGSGEGSPQGGHNGYPVGPPLS 360


>BT030402-1|ABO52821.1|  610|Drosophila melanogaster FI01009p
           protein.
          Length = 610

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 370 SVANRTPSRASAGEGAPRGTRPAYSCGPRYS 462
           S +  +PS + +GEG+P+G    Y  GP  S
Sbjct: 211 SSSGSSPSGSGSGEGSPQGGHNGYPVGPPLS 241


>AY113444-1|AAM29449.1|  596|Drosophila melanogaster RE29005p
           protein.
          Length = 596

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 370 SVANRTPSRASAGEGAPRGTRPAYSCGPRYS 462
           S +  +PS + +GEG+P+G    Y  GP  S
Sbjct: 211 SSSGSSPSGSGSGEGSPQGGHNGYPVGPPLS 241


>AE014134-906|AAN10539.1|  610|Drosophila melanogaster CG14029-PC,
           isoform C protein.
          Length = 610

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 370 SVANRTPSRASAGEGAPRGTRPAYSCGPRYS 462
           S +  +PS + +GEG+P+G    Y  GP  S
Sbjct: 211 SSSGSSPSGSGSGEGSPQGGHNGYPVGPPLS 241


>AE014134-905|AAF52237.1|  729|Drosophila melanogaster CG14029-PA,
           isoform A protein.
          Length = 729

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 370 SVANRTPSRASAGEGAPRGTRPAYSCGPRYS 462
           S +  +PS + +GEG+P+G    Y  GP  S
Sbjct: 330 SSSGSSPSGSGSGEGSPQGGHNGYPVGPPLS 360


>AY118582-1|AAM49951.1|  830|Drosophila melanogaster LD44094p
           protein.
          Length = 830

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
 Frame = +2

Query: 62  MAENEGHKHRERYDHEGEVTEKPAPAPRGPHGVQVVDTGPDHTFTLXR---GSPQVSAPE 232
           +A++ GH      D  G+  +KPAP P     + +V      T +  +    S Q    E
Sbjct: 11  LADDSGHFSCTSDDGVGDPAQKPAPQPEPDQSIFLVRQELLRTRSEVQRLLKSEQWYKQE 70

Query: 233 RRCQRQSRGRYISXRSLQERKVLL 304
            + Q+ SR + +     QERK L+
Sbjct: 71  LKSQKHSRLQTLERLYAQERKYLM 94


>AE014296-3602|AAN12187.1|  830|Drosophila melanogaster CG11248-PB,
           isoform B protein.
          Length = 830

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
 Frame = +2

Query: 62  MAENEGHKHRERYDHEGEVTEKPAPAPRGPHGVQVVDTGPDHTFTLXR---GSPQVSAPE 232
           +A++ GH      D  G+  +KPAP P     + +V      T +  +    S Q    E
Sbjct: 11  LADDSGHFSCTSDDGVGDPAQKPAPQPEPDQSIFLVRQELLRTRSEVQRLLKSEQWYKQE 70

Query: 233 RRCQRQSRGRYISXRSLQERKVLL 304
            + Q+ SR + +     QERK L+
Sbjct: 71  LKSQKHSRLQTLERLYAQERKYLM 94


>AE014296-3601|AAF51765.1|  830|Drosophila melanogaster CG11248-PA,
           isoform A protein.
          Length = 830

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
 Frame = +2

Query: 62  MAENEGHKHRERYDHEGEVTEKPAPAPRGPHGVQVVDTGPDHTFTLXR---GSPQVSAPE 232
           +A++ GH      D  G+  +KPAP P     + +V      T +  +    S Q    E
Sbjct: 11  LADDSGHFSCTSDDGVGDPAQKPAPQPEPDQSIFLVRQELLRTRSEVQRLLKSEQWYKQE 70

Query: 233 RRCQRQSRGRYISXRSLQERKVLL 304
            + Q+ SR + +     QERK L+
Sbjct: 71  LKSQKHSRLQTLERLYAQERKYLM 94


>AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA
           protein.
          Length = 3146

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 18/67 (26%), Positives = 37/67 (55%)
 Frame = -3

Query: 583 DSIVDRANTVAQSRTVDSLSKAPCVSNNIIGTFSPSSSVALNISDHMSMPVVSLSEPPRQ 404
           +SIV  +N +AQS ++ +L+     S +   T +P+ +  L+++  +++PV   + PP  
Sbjct: 625 NSIVGSSNNLAQSNSMSNLAGPRSNSGSGFATTTPTPATPLHLTP-VNVPVHVEAAPPSS 683

Query: 403 LKPWRGS 383
               +GS
Sbjct: 684 PALVKGS 690


>AE013599-3678|AAF47055.3|  181|Drosophila melanogaster CG13560-PA
           protein.
          Length = 181

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 16/62 (25%), Positives = 28/62 (45%)
 Frame = +2

Query: 110 GEVTEKPAPAPRGPHGVQVVDTGPDHTFTLXRGSPQVSAPERRCQRQSRGRYISXRSLQE 289
           G  +  P+P+   P       T P  + +   GS   S+  +R +++ R RY   +  QE
Sbjct: 108 GSSSTNPSPSTTSPSTSPTTSTSPSDSSS--SGSSSSSSSSKRNRKERRRRYRRRQRRQE 165

Query: 290 RK 295
           R+
Sbjct: 166 RR 167


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,404,233
Number of Sequences: 53049
Number of extensions: 568099
Number of successful extensions: 2132
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2117
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)