BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P02_F_J17 (642 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 22 4.4 AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 5.8 AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 5.8 AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 5.8 AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 5.8 AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 7.7 >DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein protein. Length = 250 Score = 22.2 bits (45), Expect = 4.4 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -3 Query: 529 LSKAPCVSNNIIGTFSPSSSVALNISDHMSMPVVSLSE 416 LSK VS +GT S +SS A + + S S+SE Sbjct: 167 LSKRRSVSECSLGTASSTSSTASSRNSDRSAGSPSVSE 204 >AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex determiner protein. Length = 396 Score = 21.8 bits (44), Expect = 5.8 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = +1 Query: 277 EPSGKESPSYWTSS 318 E SGKES Y TSS Sbjct: 190 EKSGKESKKYATSS 203 >AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 21.8 bits (44), Expect = 5.8 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = +1 Query: 277 EPSGKESPSYWTSS 318 E SGKES Y TSS Sbjct: 201 EKSGKESKKYATSS 214 >AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 21.8 bits (44), Expect = 5.8 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = +1 Query: 277 EPSGKESPSYWTSS 318 E SGKES Y TSS Sbjct: 201 EKSGKESKKYATSS 214 >AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex determiner protein. Length = 396 Score = 21.8 bits (44), Expect = 5.8 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = +1 Query: 277 EPSGKESPSYWTSS 318 E SGKES Y TSS Sbjct: 190 EKSGKESKKYATSS 203 >AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex determiner protein. Length = 425 Score = 21.4 bits (43), Expect = 7.7 Identities = 6/16 (37%), Positives = 11/16 (68%) Frame = -3 Query: 439 MPVVSLSEPPRQLKPW 392 +P+ + PPR ++PW Sbjct: 367 VPIYCGNFPPRSMEPW 382 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 167,601 Number of Sequences: 438 Number of extensions: 3994 Number of successful extensions: 11 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19315974 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -