Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_J07
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.27 
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       24   1.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   3.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   3.3  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   7.6  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +1

Query: 445 PSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQT 573
           P +R P    +S  + T   +P + NGSSP+ L  +  L  ++
Sbjct: 699 PQQRSPSVTDLSTKDGTT--VPESNNGSSPSVLNAIEKLIEKS 739


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 634 TTPREWPPGQQPHDPPR 684
           TT R W   ++P+ PPR
Sbjct: 126 TTERNWEIREKPYTPPR 142


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +3

Query: 75  MAAKFYVLCILLATGIA 125
           MA K Y LC LL  GIA
Sbjct: 1   MANKTYWLCCLLLLGIA 17


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +3

Query: 75  MAAKFYVLCILLATGIA 125
           MA K Y LC LL  GIA
Sbjct: 1   MANKTYWLCCLLLLGIA 17


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
 Frame = -3

Query: 558 GRKGYQRRR*TPVCCRRDQCSRT--FRVRHSRCLWSPP*RTH 439
           GR    R +  P   R DQ  R   +R R SR    PP R H
Sbjct: 208 GRHNQSRSKRQPKTGREDQTRRNPYYRPRTSRT--EPPRRKH 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,529
Number of Sequences: 336
Number of extensions: 3412
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)