Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_J07
(719 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 31 0.17
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 29 0.67
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 1.2
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 28 1.5
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 28 1.5
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.7
SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3 |Schizos... 27 2.7
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 27 3.6
SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr ... 26 4.7
SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MB... 26 4.7
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 6.2
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 26 6.2
SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid aminotr... 26 6.2
SPBC18H10.02 |lcf1||long-chain-fatty-acid-CoA ligase Lcf1 |Schiz... 26 6.2
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 6.2
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 26 6.2
SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1 |Schizosa... 25 8.2
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 25 8.2
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 8.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 8.2
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 31.1 bits (67), Expect = 0.17
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 418 HSVTRLRMGPSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTL-ATLTSQTKRMNPKL 594
HS+T + + + Y+ S T+ T+ S TSL +L +TLTSQ N
Sbjct: 582 HSITPSNTSYTSSLIPSSSTDYSSSLITVCSNVTSEISSTSLASLISTLTSQQISSNKSS 641
Query: 595 QHLTPPSATTEYRTT 639
+ + TTEY T+
Sbjct: 642 EFV--GQTTTEYTTS 654
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 29.1 bits (62), Expect = 0.67
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Frame = +1
Query: 445 PSRRRPEAPTVSYAESTATLIPTATNGSS---PTSLVTLATLTSQ---TKRMNPKLQHLT 606
P+R + YA+S+ +P+ + S PT+L + T TS ++R++ +
Sbjct: 141 PNRIYGDRNRQDYAQSSRYTLPSLPSSPSYNCPTTLRKIHTNTSSNGTSRRVSGLGSFMA 200
Query: 607 PPSATTEYRTTPREWPPGQQPHDPPRRSSRTISXMPT 717
S+ T T + PG + +RSS T++ MP+
Sbjct: 201 QNSSETSSNRTSA-YLPGSSTDEQEKRSSVTLASMPS 236
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.3 bits (60), Expect = 1.2
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Frame = +1
Query: 325 SFSPNHSRRGPSSLQCRLLETITR*TMMEALHSVTRLRMGPSRRRPEAP--TVSYAE-ST 495
S S S SSL T T ++ + S T L S + T S A+ +T
Sbjct: 219 SNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNT 278
Query: 496 ATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATT 624
++L+P++T S+P S T TS + + T SA++
Sbjct: 279 SSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASS 321
Score = 25.4 bits (53), Expect = 8.2
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +1
Query: 421 SVTRLRMGPSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQH 600
S T L S + + + +T++++PT++ S+P S T TS + +
Sbjct: 387 SSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSSVNS 446
Query: 601 LTPPSATT 624
T SA++
Sbjct: 447 TTATSASS 454
Score = 25.4 bits (53), Expect = 8.2
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +1
Query: 421 SVTRLRMGPSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQH 600
S T L S + + + +T++++PT++ S+P S T TS + +
Sbjct: 501 SSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLTSVNS 560
Query: 601 LTPPSATT 624
T SA++
Sbjct: 561 TTATSASS 568
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 27.9 bits (59), Expect = 1.5
Identities = 21/80 (26%), Positives = 32/80 (40%)
Frame = +1
Query: 436 RMGPSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPS 615
RM RRR A + S T + T G+SP +L+T T ++NP +
Sbjct: 442 RMNEERRRLSAAATATPMSAPTSVLT---GTSPQPSPSLSTSIMSTPKLNPSESVVVASE 498
Query: 616 ATTEYRTTPREWPPGQQPHD 675
+ +P+ P Q D
Sbjct: 499 KASSPDLSPKLLPSESQIFD 518
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 535 TSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPREWPP 657
TSLV LT +T ++ LQ+L P A R W P
Sbjct: 240 TSLVLCKPLTGRTHQLRVHLQYLGYPIANDPIYANKRVWGP 280
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 466 APTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNP-KLQHLTPPSATT 624
+P SY++ + +P++T+ SPTS + T + ++P + PS+T+
Sbjct: 101 SPVSSYSDPATSQLPSSTSFFSPTSSEYTPSSTESSSLLDPSSVSSAILPSSTS 154
>SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 732
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 463 EAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNP 588
E+P VSY+ +L + +G SP SLV+ T S NP
Sbjct: 76 ESP-VSYSNPIPSLTWLSLDGDSPDSLVSTPTAPSANHHGNP 116
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 205 LEDRCTSSFRLTNTTPYIDRMTAKMKSMSRDQFSGCHP-GRSFSPNHSRRGP 357
L R S + +PY D + + R + P GRS SP++ RR P
Sbjct: 113 LRSRSPSPHEARSRSPYNDERSDRRSMSPRYRSRSRSPDGRSRSPDYDRRSP 164
>SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 293
Score = 26.2 bits (55), Expect = 4.7
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +1
Query: 316 PGRSFSPNHSRRG--PSSLQCRLLETITR*TMMEALHSVT---RLRM--GPSRRRPEAPT 474
P S + + +G PS +L +ITR E S + RL S+ + T
Sbjct: 54 PNSSSNSTPANQGSLPSHTNPQLYSSITRKERPELFRSYSGNPRLSKPYASSKLAASSRT 113
Query: 475 VSYAESTATLIPTATNGSSPTSL 543
SY + ++ PT+TN S TSL
Sbjct: 114 ASYQAMSYSVSPTSTNSSVATSL 136
>SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MBOAT
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 588
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 677 GSWGCWPGGHSRGVVRYSVVALGG 606
G W W +R ++RY V LGG
Sbjct: 426 GFWRAWHRSFNRWLIRYIYVPLGG 449
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.8 bits (54), Expect = 6.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 478 SYAESTATLIPTATNGSSPTSLVTLATLTSQTKRM 582
S S+ T PT T+ +PT T T T+Q+ M
Sbjct: 844 SSTTSSITPTPTTTSSITPTPTTTSTTTTAQSTGM 878
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 487 PRTTQSVPLVSSLKDPSAAS*PNVKLPSSF 398
P+ +VP +S+ S AS PN+K S F
Sbjct: 70 PKIPSAVPHISTPNPSSGASTPNIKRVSDF 99
>SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid
aminotransferase Eca39|Schizosaccharomyces pombe|chr
2|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 6.2
Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 2/83 (2%)
Frame = -1
Query: 662 WPGG--HSRGVVRYSVVALGGVRCWSFGFILFVWLVRVARVTRDVGELPFVAVGINVAVL 489
WPGG H + Y+ L G+ +WL +VG + V IN
Sbjct: 201 WPGGTGHYKLGGNYAPSVLPQKEAAKKGYAQILWLYGDEDYITEVGTMNCFTVWINKNGE 260
Query: 488 SAYDTVGASGLLLEGPIRSLVTE 420
T G++L G R + E
Sbjct: 261 KEIITAPLDGMILPGVTRDSILE 283
>SPBC18H10.02 |lcf1||long-chain-fatty-acid-CoA ligase Lcf1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 676
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = -1
Query: 503 NVAVLSAYDTVGASGL---LLEGPIRSLVTE 420
++ +++AYDT+G GL L E +R + TE
Sbjct: 145 SMTIVTAYDTLGEEGLLHSLRESGVRGMYTE 175
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.8 bits (54), Expect = 6.2
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 463 EAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTP 642
E+P+V+ + S+ T T TN S+P + ++ + T N T P T+ T+P
Sbjct: 319 ESPSVALSTSSTT---TITNASTPAANTIISRSSKPTDTTNSISFANTTPENTSTQITSP 375
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 25.8 bits (54), Expect = 6.2
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 406 MEALHSVTRLRMGPSRRRPEAPTVSYAESTATLIPTAT 519
MEAL R R+ + +P+VS A S A +IP +T
Sbjct: 1224 MEALPERLRPRVKQRFMKIRSPSVSSATSVALMIPIST 1261
>SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 222
Score = 25.4 bits (53), Expect = 8.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 378 IRNYNKVNDDGSFTFGYEAADGSFKEETRGTDCVVRGKYGYID 506
I+NY+K+N FG E AD E+ +C G+ G ++
Sbjct: 124 IKNYSKINILIKELFGLEVADCIEDEDGYRFNCKNTGRRGTLE 166
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 25.4 bits (53), Expect = 8.2
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -1
Query: 278 ILAVILS-IYGVVLVSRNELVHLSSSSAILGLVLIIVRVFHL-LQTRPGSSASGYP 117
I+ V++S I+ S NEL L S I G L+ + +F L TR GS S YP
Sbjct: 270 IIPVLISTIHHCTSDSFNELEKLIISK-ITGEPLLYINLFKATLVTRKGSRVSDYP 324
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 8.2
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +1
Query: 469 PTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPRE 648
PT S + +T+T IPT + S T + TS + P PP++T+ T
Sbjct: 223 PTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIP-----IPPTSTSSTDTNSSP 277
Query: 649 WP 654
P
Sbjct: 278 LP 279
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 8.2
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 421 SVTRLRMGPSRRRPEAPTVSYAESTATLIPTATNGSSP-TSLVTLATLTSQTKRMNPKLQ 597
SVT + S + T++ A S ATL A +GSS TS T ++ +S + +
Sbjct: 1094 SVTAVSSTSSVEGTASSTIAAAASAATLSSDAASGSSTVTSSATASSSSSAATTADSSVT 1153
Query: 598 HLTP 609
TP
Sbjct: 1154 TDTP 1157
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,779,354
Number of Sequences: 5004
Number of extensions: 55380
Number of successful extensions: 192
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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