Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_J07
(719 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0151 + 8837444-8837876,8838173-8839434,8839517-8839885,883... 35 0.057
07_03_1257 - 25241194-25242018 31 0.92
06_01_0558 - 3968211-3969475,3970198-3970266,3970374-3970529,397... 31 0.92
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 31 0.92
01_01_0070 - 542603-542686,542803-543441 31 0.92
08_02_0751 + 20789843-20789908,20791152-20791313,20791516-207915... 31 1.2
03_05_0083 - 20616432-20616469,20616666-20617119 30 2.1
11_04_0196 - 14740121-14740468 29 2.8
11_01_0718 + 5920786-5920927,5921069-5921364 29 2.8
09_04_0392 + 17251536-17252336 29 2.8
05_03_0564 - 15502458-15503303,15503394-15503474,15503572-155036... 29 2.8
05_03_0563 - 15493570-15494415,15494506-15494586,15494684-154947... 29 2.8
05_03_0562 - 15484733-15485578,15485669-15485749,15485847-154858... 29 2.8
01_04_0011 + 15067536-15068236,15068283-15068898 29 2.8
04_04_1266 + 32239451-32239829,32239874-32239884 29 3.7
12_01_0442 + 3495333-3496484 29 4.9
12_01_0249 + 1850443-1851030 29 4.9
04_03_0930 - 20891334-20891511,20891958-20892109,20892737-208931... 29 4.9
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309... 29 4.9
11_01_0029 + 226459-226973,227053-227424,227533-227688,229513-22... 28 6.5
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 28 6.5
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 28 6.5
10_08_0615 - 19259402-19259597,19260248-19260735,19264895-19265140 28 8.6
10_01_0267 - 2828966-2829340,2831164-2831629,2833390-2833487,283... 28 8.6
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 28 8.6
04_01_0034 - 401208-402923 28 8.6
02_02_0097 - 6746934-6747005,6747372-6748325,6748421-6748435,674... 28 8.6
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 28 8.6
01_01_0769 - 5944910-5946613,5946768-5946887,5948243-5948300,594... 28 8.6
>11_02_0151 +
8837444-8837876,8838173-8839434,8839517-8839885,
8839963-8840223,8840230-8840442,8840602-8840967,
8841402-8841667,8842087-8842197,8842288-8842317,
8842444-8842465
Length = 1110
Score = 35.1 bits (77), Expect = 0.057
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -3
Query: 717 RRHL*NRSGRTSWGVVGLLAWG---PLSWGSSVLRRRARRSQVLELRVHPLRLAC*GRKG 547
+RHL N++ WG + + W P L RR + S + + ++P RL G G
Sbjct: 685 QRHLKNKTPFEEWGTISAVEWDKFVPKMTTPEALERRKKMSDLAKKNIYPHRLGSSGYAG 744
Query: 546 YQRR 535
++++
Sbjct: 745 HEKK 748
>07_03_1257 - 25241194-25242018
Length = 274
Score = 31.1 bits (67), Expect = 0.92
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 457 RPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTP--PSATTEY 630
+P AP V+ +ST P+ + + TLA+ T+ T+R P+ H P P T
Sbjct: 50 QPPAPDVAGRDST----PSPASMTPSRCRTTLASTTT-TRRRPPRRLHSRPRHPRGRTTA 104
Query: 631 RTTPREWPPGQQPHDP 678
TTP+ PP P P
Sbjct: 105 STTPQ--PPRPLPRQP 118
>06_01_0558 -
3968211-3969475,3970198-3970266,3970374-3970529,
3971075-3971405
Length = 606
Score = 31.1 bits (67), Expect = 0.92
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Frame = +1
Query: 94 CSAYCWRQG*PLALDPGLVCSRWKTLTIMRTRPRIA--ELEDRCTSSFRLTNTTPYIDRM 267
C A+ W G P C RW+ +T R+ +L+ S + L N + ++
Sbjct: 33 CDAFLWPAGNPPDWS-SRDCCRWERVTCSSITGRVTALDLDAAYPSWYGLLNCSMFLPFR 91
Query: 268 TAKMKSMSRDQFSGCHPGRSF 330
+ S+ +GC PG F
Sbjct: 92 ELQNLSLGNAGIAGCMPGAGF 112
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 31.1 bits (67), Expect = 0.92
Identities = 24/81 (29%), Positives = 34/81 (41%)
Frame = +1
Query: 436 RMGPSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPS 615
R+GP E + S A +T P A SS + + + +S T +P HL PPS
Sbjct: 315 RVGPPSG--EFASRSSASDPSTAPPAAAEASSSSLSPSSPSASSPTLGSSPV--HLRPPS 370
Query: 616 ATTEYRTTPREWPPGQQPHDP 678
P PP ++P P
Sbjct: 371 IPQPRGRAPNPSPPKRRPQPP 391
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 31.1 bits (67), Expect = 0.92
Identities = 25/101 (24%), Positives = 38/101 (37%)
Frame = +1
Query: 412 ALHSVTRLRMGPSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPK 591
ALH P+ P PT + + P A +PT+ T ++ + P
Sbjct: 18 ALHLALAAAQSPAAA-PAQPTPTPVPTAPAKSPPAPATPAPTATPTPPVAPAKAPPVAPA 76
Query: 592 LQHLTPPSATTEYRTTPREWPPGQQPHDPPRRSSRTISXMP 714
+ +TPP T + P PP P PP + +S P
Sbjct: 77 VAPVTPPPPTPKKAPPPPVTPP---PVTPPPVTPPPVSPPP 114
>08_02_0751 +
20789843-20789908,20791152-20791313,20791516-20791566,
20792096-20792160,20792385-20792459,20792603-20792780,
20793171-20793353,20793436-20793549,20793627-20793736,
20793826-20793904,20794035-20794172
Length = 406
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 457 RPEAPTVSYAESTATLIPTATNGSSPTSLVTLAT 558
+P AP +E +PTAT S+P + VT A+
Sbjct: 107 QPPAPPAPVSEPVTAPVPTATTASAPAAAVTAAS 140
>03_05_0083 - 20616432-20616469,20616666-20617119
Length = 163
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -1
Query: 686 RRGGSWGCWPGGHSRGVVRYS 624
RRG WGC PG RGV R S
Sbjct: 92 RRGAVWGCRPGKGKRGVGRGS 112
>11_04_0196 - 14740121-14740468
Length = 115
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 638 PHESGPQANNPTTPH 682
P +GP A+NPTTPH
Sbjct: 37 PRNTGPAASNPTTPH 51
>11_01_0718 + 5920786-5920927,5921069-5921364
Length = 145
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +3
Query: 90 YVLCILLATGIAAGARPRPRLQQVED 167
++L +LLATGIAAG +P PR V D
Sbjct: 5 FLLLLLLATGIAAGEQP-PRRTAVAD 29
>09_04_0392 + 17251536-17252336
Length = 266
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +1
Query: 505 IPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPREWPPG 660
+P+ NG+ + VT AT T++ +M P L +P SA E TTP +W G
Sbjct: 185 MPSQRNGNGGDA-VTAATTTAE--QMTPTL---SPCSADAEETTTPVDWQMG 230
>05_03_0564 -
15502458-15503303,15503394-15503474,15503572-15503620,
15503786-15503828,15504576-15504633,15504720-15504858,
15504980-15505107
Length = 447
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 589 KLQHLTPPSATTEYRTTPREWPPGQQPHDPPRRSSRTI 702
+L+HL P+A+ + RT+ R + P RRSSR I
Sbjct: 47 RLKHLVSPTASLQSRTSSRLFNHAPSPRFRHRRSSRFI 84
>05_03_0563 -
15493570-15494415,15494506-15494586,15494684-15494732,
15494898-15494940,15495688-15495745,15495832-15495970,
15496092-15496219
Length = 447
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 589 KLQHLTPPSATTEYRTTPREWPPGQQPHDPPRRSSRTI 702
+L+HL P+A+ + RT+ R + P RRSSR I
Sbjct: 47 RLKHLVSPTASLQSRTSSRLFNHAPSPRFRHRRSSRFI 84
>05_03_0562 -
15484733-15485578,15485669-15485749,15485847-15485895,
15486061-15486103,15486851-15486908,15486995-15487133,
15487255-15487382
Length = 447
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 589 KLQHLTPPSATTEYRTTPREWPPGQQPHDPPRRSSRTI 702
+L+HL P+A+ + RT+ R + P RRSSR I
Sbjct: 47 RLKHLVSPTASLQSRTSSRLFNHAPSPRFRHRRSSRFI 84
>01_04_0011 + 15067536-15068236,15068283-15068898
Length = 438
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +1
Query: 448 SRRRPEAPTVSYAES---TATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPS 615
S+ EA T S ++ TA T SSPT T +T R+ P +H+ PP+
Sbjct: 217 SKSTKEAMTPSMSKMLARTAGWCSTTARSSSPTPSSTEGKVTVDDNRVGPLYEHVFPPA 275
>04_04_1266 + 32239451-32239829,32239874-32239884
Length = 129
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 463 EAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTT 639
++PT SY+ ++A PT N SS + + T+ +R P + T YR T
Sbjct: 2 DSPTTSYSTTSALGDPTCPNTSSDE--IRIITIDYSIRRDRPSFKTSPSRKTLTNYRRT 58
>12_01_0442 + 3495333-3496484
Length = 383
Score = 28.7 bits (61), Expect = 4.9
Identities = 25/91 (27%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Frame = +1
Query: 445 PSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATT 624
P R P A T + A ++ P T G P S L +T PKL PP
Sbjct: 156 PEHRAPAARTTTAAPASPPDSPIWTPGHKPPSSSPDIYLVRRT----PKLPVTRPPRTKQ 211
Query: 625 EYRTTPREWPPGQQPHD-PPRRSSRTISXMP 714
T P PP P P+ ++ + P
Sbjct: 212 APPTAPAPAPPPPPPQPASPKTKTKAKAKKP 242
>12_01_0249 + 1850443-1851030
Length = 195
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = -2
Query: 541 ET*VNSRLLPSGSM*PYFPRTTQSVPLVSSLKDPSAAS*PNVKLPSS 401
E V+S+ SG+ F TT S L +S D SAA+ P LP+S
Sbjct: 20 ENKVSSKKRRSGAKSCSFGSTTSSSSLAASSSDDSAATTPRSVLPTS 66
>04_03_0930 -
20891334-20891511,20891958-20892109,20892737-20893169,
20893592-20893708,20894099-20894196
Length = 325
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = -1
Query: 653 GHSRGVVRY---SVVALGGVRCWSFGFIL 576
GH G R+ SV LGG CWS FIL
Sbjct: 133 GHVGGAHRWAIGSVALLGGSACWSLWFIL 161
>03_04_0090 +
17228253-17228403,17229062-17229129,17229238-17230902,
17231002-17231143,17231648-17232399
Length = 925
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +1
Query: 436 RMGPSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPS 615
++ + R E PT+ A+ I N SP S++ T + +P L+ ++
Sbjct: 620 KIASTPNREEMPTILPADKKK--IHPQENIPSPVSVLDA---TFYHEGSSPSLKRISDSF 674
Query: 616 ATTEYRTTPREWPPGQQPHDPPRRSS 693
E T+ W P P PP ++S
Sbjct: 675 KDGETHTSDESWNPTSLPDTPPSKAS 700
>11_01_0029 +
226459-226973,227053-227424,227533-227688,229513-229595,
229665-229728,230209-230596
Length = 525
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 589 KLQHLTPPSATTEYRTTPREWPPGQQPHDPPRRSSRTISXMP 714
K Q +PPS T T+P PP P P SS +++ +P
Sbjct: 3 KPQQQSPPSTTATTTTSPPPPPPSTPP--PASSSSSSLAKLP 42
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Frame = +1
Query: 460 PEAPTVSYAESTA--TLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYR 633
P +PT Y S+A T P + + P + A QT+ +P Q P +
Sbjct: 39 PPSPTTCYPVSSAAPTAPPPKPSPTPPPASPPPAPTPPQTRPPSPPPQQQQPRPVSPPPV 98
Query: 634 TTPREWPPGQQPHDPPR 684
P WP D PR
Sbjct: 99 AEPYYWPKPYDYGDAPR 115
>07_03_0965 - 22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 466 APTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPR 645
+P+ S ++ST P + + V L + Q+ + NP + T Y + P
Sbjct: 1392 SPSNSVSKSTGGSPPASGSAKGVPPAVQLPSPQQQSAK-NPASTSGAKSAPTNHYSSMPM 1450
Query: 646 EWPPGQQPHDPPRRSS 693
GQQP+ PP +S
Sbjct: 1451 PSILGQQPNVPPGSNS 1466
>10_08_0615 - 19259402-19259597,19260248-19260735,19264895-19265140
Length = 309
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 581 ILFVWLVRVARVTRDVGELPFVAVG--INVAVLSAYDTVGASGLLLEGPIRSL 429
+LFV + VA TR VGEL +AVG + + +L A T G S P+R+L
Sbjct: 211 LLFV-VTAVATDTRAVGELAGIAVGAAVTLNILIAGPTTGGS----MNPVRTL 258
>10_01_0267 -
2828966-2829340,2831164-2831629,2833390-2833487,
2833782-2834078,2834287-2834694
Length = 547
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/54 (22%), Positives = 18/54 (33%)
Frame = -2
Query: 274 WRSFCLYMESYWSAGTSWYTCPPALLSWAWFXXXXXXSTCCKRGLGRAPAAIPV 113
WR + + T + C P W + CKR R P +P+
Sbjct: 325 WRDAAVVLMLIHQFITFGFACTPLYFVWEKLVGLHGCPSLCKRAAARLPVVLPI 378
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 199 AELEDRCTSSFRLTNTTPYIDRMTAKMKSMSRDQFSGCHPGRSFSPNH 342
A+LE C S L T ID K+ S+D+ +G H FSP H
Sbjct: 428 ADLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAH---FFSPAH 472
>04_01_0034 - 401208-402923
Length = 571
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +1
Query: 526 SSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPREWPPGQQPHDPPRRSS 693
++P LA R+ + + PP + R P PP P DPP R++
Sbjct: 281 AAPPMRAPLAEQQPHAPRLPLQPRPAPPPPPPQQQRAKPSRPPPPPPPLDPPPRAA 336
>02_02_0097 -
6746934-6747005,6747372-6748325,6748421-6748435,
6748592-6748984
Length = 477
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +1
Query: 463 EAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTP 642
+ P + S+++L+ + +G++ TSL+ T + P + L ATT TT
Sbjct: 192 QLPPTRPSSSSSSLVGSPADGAASTSLLRTMTPMMASSSATPSPRELAAQVATTTTTTTT 251
Query: 643 REWPPGQQPHDP 678
P P
Sbjct: 252 PSSSSRLHPRPP 263
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/75 (29%), Positives = 31/75 (41%)
Frame = +1
Query: 457 RPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRT 636
RP VS ++ T+++ ++PT LVT T + PKL PP
Sbjct: 307 RPSNAGVSMSKCFPCCFKTSSDATTPT-LVTGGTQENNATSDAPKLMPPPPPPPPPPPPP 365
Query: 637 TPREWPPGQQPHDPP 681
P PP +P PP
Sbjct: 366 PP---PPPPRPPPPP 377
>01_01_0769 -
5944910-5946613,5946768-5946887,5948243-5948300,
5948544-5948627,5949356-5949456,5949562-5949745,
5950746-5950774,5951134-5951226
Length = 790
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 280 KSMSRDQFSGCHPGRSFSP 336
KS S DQ S HPG FSP
Sbjct: 542 KSQSGDQLSSQHPGNVFSP 560
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,735,293
Number of Sequences: 37544
Number of extensions: 484057
Number of successful extensions: 2049
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2044
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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