Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_J07
(719 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 35 0.058
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.076
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 34 0.13
SB_41879| Best HMM Match : DUF1658 (HMM E-Value=7) 33 0.31
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_34828| Best HMM Match : W2 (HMM E-Value=6.9) 33 0.31
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 32 0.54
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37) 31 0.71
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.94
SB_25059| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_50338| Best HMM Match : TNFR_c6 (HMM E-Value=1.4e-05) 30 1.6
SB_28082| Best HMM Match : A2M_comp (HMM E-Value=0) 30 1.6
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 30 1.6
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 30 2.2
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_53479| Best HMM Match : Zot (HMM E-Value=1.1) 29 2.9
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 29 2.9
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_8051| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 29 2.9
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3) 29 2.9
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_57603| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_4999| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.8
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_52131| Best HMM Match : AIRS_C (HMM E-Value=1.69978e-42) 29 5.0
SB_37854| Best HMM Match : MGC-24 (HMM E-Value=4.9) 29 5.0
SB_20579| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.39) 29 5.0
SB_51468| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_37962| Best HMM Match : Tcp10_C (HMM E-Value=5.9e-36) 28 6.6
SB_30162| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_8791| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_57471| Best HMM Match : TatC (HMM E-Value=0.27) 28 6.6
SB_39625| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_23226| Best HMM Match : Herpes_UL43 (HMM E-Value=1.9) 28 6.6
SB_17889| Best HMM Match : Patched (HMM E-Value=0.14) 28 6.6
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 28 6.6
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 28 8.8
SB_25197| Best HMM Match : TatC (HMM E-Value=1.8) 28 8.8
SB_20796| Best HMM Match : RVT_1 (HMM E-Value=0.047) 28 8.8
SB_242| Best HMM Match : AFP (HMM E-Value=0.45) 28 8.8
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 35.1 bits (77), Expect = 0.058
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = +1
Query: 445 PSRRRPEAPTVSYAESTAT-LIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSAT 621
P+ P PT + +T T PT T + T+ T T T K TPP+ T
Sbjct: 56 PATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATT 115
Query: 622 TEYRTTPREWPPGQQPHDPPRRSSRTISXMPT 717
T + T PPG P ++ + PT
Sbjct: 116 TPTKPTTTT-PPGTTTPTKPTTTTPPATTTPT 146
Score = 32.3 bits (70), Expect = 0.41
Identities = 25/91 (27%), Positives = 33/91 (36%)
Frame = +1
Query: 445 PSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATT 624
PS++ P T + T T P T + PT+ AT T P T P ATT
Sbjct: 35 PSQQLPHNRTTTPTTPTTTTPPATTTPTKPTNTTPPATTT-------PTKPTTTTPPATT 87
Query: 625 EYRTTPREWPPGQQPHDPPRRSSRTISXMPT 717
T PP P ++ + PT
Sbjct: 88 TPTTPTTTTPPATTTPTKPTTTTPPATTTPT 118
Score = 31.9 bits (69), Expect = 0.54
Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 1/92 (1%)
Frame = +1
Query: 445 PSRRRPEAPTVSYAESTAT-LIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSAT 621
P+ P PT + +T T PT T + T+ T T K TPP T
Sbjct: 70 PATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPGTT 129
Query: 622 TEYRTTPREWPPGQQPHDPPRRSSRTISXMPT 717
T + T PP P ++ + PT
Sbjct: 130 TPTKPTTTT-PPATTTPTKPTTTTPPATTTPT 160
Score = 31.9 bits (69), Expect = 0.54
Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
Frame = +1
Query: 445 PSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNP-KLQHLTPPSAT 621
P+ P PT + +T T T T+ T T T+ P K TPP+ T
Sbjct: 84 PATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATT 143
Query: 622 TEYRTTPREWPPGQQPHDPPRRSSRTISXMPT 717
T + T PP P ++ + PT
Sbjct: 144 TPTKPTTTT-PPATTTPTKPTTTTPPATTTPT 174
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 1/80 (1%)
Frame = +1
Query: 445 PSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNP-KLQHLTPPSAT 621
P+ P PT + T T T T+ T T T+ P K TPP+ T
Sbjct: 112 PATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATT 171
Query: 622 TEYRTTPREWPPGQQPHDPP 681
T ++T P P P
Sbjct: 172 TPTKSTTTTPPATTTPTTRP 191
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/88 (26%), Positives = 32/88 (36%), Gaps = 2/88 (2%)
Frame = +1
Query: 460 PEAPTVSYAESTATLIPTATNGSSP--TSLVTLATLTSQTKRMNPKLQHLTPPSATTEYR 633
P PT + +T T PT ++P T+ T T T+ P T P ATT
Sbjct: 47 PTTPTTTTPPATTT--PTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Query: 634 TTPREWPPGQQPHDPPRRSSRTISXMPT 717
PP P ++ + PT
Sbjct: 105 KPTTTTPPATTTPTKPTTTTPPGTTTPT 132
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 34.7 bits (76), Expect = 0.076
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +1
Query: 553 ATLTSQTKRMNPKLQHLTPPSATTEYRTTPREWPPGQQPHDPPRRSS 693
A+ +S T R LQ L PPS T + TTP +P PP R S
Sbjct: 41 ASASSSTSRPTNALQPLKPPSNTPQQLTTPPHQSNTPRPLTPPSRQS 87
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 33.9 bits (74), Expect = 0.13
Identities = 32/121 (26%), Positives = 47/121 (38%), Gaps = 2/121 (1%)
Frame = +1
Query: 301 FSGCHPGRSFSPNHSRRGPS--SLQCRLLETITR*TMMEALHSVTRLRMGPSRRRPEAPT 474
++ C + + HS PS SL T+T T + + R+ + + PT
Sbjct: 1689 YAQCQSSIAKNSVHSIPSPSRPSLNIAPSSTLTPSTAGHTIDIRSTNRVHSRAQEGQIPT 1748
Query: 475 VSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPREWP 654
+S ++T+T T P S T T T+ T T P TT TTPR
Sbjct: 1749 LSTLKTTSTSTSTTKYIPPPHSPPTTTTTTTTTPETT--APRTTTPETTTPETTTPRTTT 1806
Query: 655 P 657
P
Sbjct: 1807 P 1807
>SB_41879| Best HMM Match : DUF1658 (HMM E-Value=7)
Length = 180
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 514 ATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPREWPPGQQPHDPPRRS 690
+ S + L + AT K+ PK +LTPP T R++PR+ + P R +
Sbjct: 61 SNKSSEESKLTSEATGIKLVKKTPPKQSNLTPPKPTYSLRSSPRKGQAIKTDESPSRNA 119
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.7 bits (71), Expect = 0.31
Identities = 28/91 (30%), Positives = 37/91 (40%)
Frame = +1
Query: 445 PSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATT 624
P+ P APT + + AT PT +PT T +TLT T P T P+ T
Sbjct: 56 PTTPSPTAPTQT-TPTPATPTPTTPTPKTPTP--TTSTLTKPTPATTPT---PTKPTPTA 109
Query: 625 EYRTTPREWPPGQQPHDPPRRSSRTISXMPT 717
TTP P P P ++ + PT
Sbjct: 110 HTPTTPT--PTAHTPTKPTPKTPTPTTPTPT 138
Score = 27.9 bits (59), Expect = 8.8
Identities = 23/73 (31%), Positives = 30/73 (41%)
Frame = +1
Query: 460 PEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTT 639
P APT+ T + AT ++PT T + TK +P T P+ TT TT
Sbjct: 5 PTAPTL-----TTPTLTKATPQTTPTPTKPTPTTHTPTK-PSPTTPTSTAPTQTTPTPTT 58
Query: 640 PREWPPGQQPHDP 678
P P Q P
Sbjct: 59 PSPTAPTQTTPTP 71
>SB_34828| Best HMM Match : W2 (HMM E-Value=6.9)
Length = 184
Score = 32.7 bits (71), Expect = 0.31
Identities = 25/84 (29%), Positives = 36/84 (42%)
Frame = +1
Query: 460 PEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTT 639
P T S A++ A PT + P S + +R+ P TPP +T + R
Sbjct: 96 PPNSTPSTAQAVANNDPTLP--TPPFSTPRPRPKAKRIRRLLPTPPPPTPPQSTPKPRRV 153
Query: 640 PREWPPGQQPHDPPRRSSRTISXM 711
PP PPRR+S+ I+ M
Sbjct: 154 LPTPPPKPPTPRPPRRASKRIAKM 177
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 31.9 bits (69), Expect = 0.54
Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 3/104 (2%)
Frame = +1
Query: 340 HSRRGPS--SLQCRLLETITR*TMMEALHSVTRLRMGPSRRRPEAPTVSYAESTATLIPT 513
HS+ PS SL T+T T + + + + + PT+S ++TAT T
Sbjct: 88 HSKPSPSRPSLNIAPSSTLTPSTAGHTIDIRSTDHVHSRAQEEQIPTLSTLKTTATSTST 147
Query: 514 ATNGSSPTS-LVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTP 642
P S T T T +T T P TT TTP
Sbjct: 148 TKYIPPPPSPPTTTTTTTPETTAPRTTTPETTTPETTTPRTTTP 191
>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 31.9 bits (69), Expect = 0.54
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Frame = +1
Query: 466 APTVSYAES-TATLIPTATNG----SSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEY 630
APT + + TAT+ PTA+N ++ TS T+ L T + TP + T
Sbjct: 433 APTATLTSAPTATVTPTASNAFTETTTVTSTTTITVLPQPTSASSSITPSSTPATGTATI 492
Query: 631 RTTPREWPPGQQP 669
T PP P
Sbjct: 493 ATATYSVPPSVAP 505
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 31.5 bits (68), Expect = 0.71
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 451 RRRPEAPTVSYAESTATLIPTAT-NGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTE 627
+ R EA T + T IPT T + + P ++ T T+ P T + TT+
Sbjct: 1419 KTREEATTKPTTTTRKTTIPTTTASETKPPTIRKTTTATTTVPATKPPTTRKTTTATTTQ 1478
Query: 628 YRTTPREWPPGQQP 669
RTT + + P
Sbjct: 1479 GRTTRKPTTTAEPP 1492
>SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37)
Length = 1188
Score = 31.5 bits (68), Expect = 0.71
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -2
Query: 298 GLCSYSSSWRSFCLYMESYWSAGTSWYTCPPA 203
GLCS S +R FC+YME+ + G + PP+
Sbjct: 643 GLCS--SCYRRFCIYMETTYGGGGNTSPIPPS 672
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 31.1 bits (67), Expect = 0.94
Identities = 25/122 (20%), Positives = 46/122 (37%)
Frame = +1
Query: 220 TSSFRLTNTTPYIDRMTAKMKSMSRDQFSGCHPGRSFSPNHSRRGPSSLQCRLLETITR* 399
T++ T TTPY T + + + + + +PN + P++ T T
Sbjct: 122 TTTTTTTTTTPYATTTTPNTTTTTPNTTTTSPNATTTTPNTTTTTPNTTTTTPTATTTTP 181
Query: 400 TMMEALHSVTRLRMGPSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKR 579
T + T + P A T + +T T T T ++ T+ T T+ R
Sbjct: 182 TATTTTPNTTTNTPNATTTTPTATTTTPNATTTTPNTTTTTPNATTTTPTATTMQQSFNR 241
Query: 580 MN 585
++
Sbjct: 242 VS 243
>SB_25059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 439 MGPSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSA 618
M PS +APT + S L+P + P + T T+ S TK + +L H PP++
Sbjct: 175 MRPSSPNSQAPTTTSPTSPTPLLPPSAPPIQPVACPTSPTIASPTK-LKRELPH--PPAS 231
Query: 619 TTEYR 633
+ R
Sbjct: 232 PRKGR 236
>SB_50338| Best HMM Match : TNFR_c6 (HMM E-Value=1.4e-05)
Length = 374
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 505 IPTATNGSSPTSL-VTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPREWPPGQQPHDPP 681
IP T + PTS + LTS P + P + TTE RT + P QP PP
Sbjct: 155 IPIPTPTAKPTSKPMPQLPLTSPPSTTTPSM----PANHTTENRTNSADLVPSGQPSSPP 210
>SB_28082| Best HMM Match : A2M_comp (HMM E-Value=0)
Length = 1013
Score = 30.3 bits (65), Expect = 1.6
Identities = 31/120 (25%), Positives = 45/120 (37%)
Frame = +1
Query: 271 AKMKSMSRDQFSGCHPGRSFSPNHSRRGPSSLQCRLLETITR*TMMEALHSVTRLRMGPS 450
+ M M FSG P R H+ GP + + T + + TR M S
Sbjct: 812 SNMAVMELGVFSGFTPDRESVAKHAYNGPRGRSQPMAARVQYATRSLSANGSTRTIMLRS 871
Query: 451 RRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEY 630
R +P A V YA + + NGS+ T +A L+ N P +A +Y
Sbjct: 872 RSQPMAARVQYASRS-----LSANGSTRTICHAVA-LSQWQHAYNMPRGRSQPMAARVQY 925
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 490 STATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPREWP 654
S+ +I T T+G +PTS +++ TLT+ + L P SA + P P
Sbjct: 531 SSLIIIDTTTSGITPTSTISVTTLTTTRTHTTTSIT-LHPSSAILDNSLGPASTP 584
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +1
Query: 490 STATLIPTATNGSSPTSLVTLATLTSQTKRMN--PKLQHLTPPSATTEYR---TTPREWP 654
+TAT TAT + TS T +T T P + + PP PR P
Sbjct: 122 ATATTSTTATTPAKTTSATTKPVMTPTTPAPMTLPPISPIDPPRTQPPPIFPIDPPRTQP 181
Query: 655 PGQQPHDPPR 684
P P DPPR
Sbjct: 182 PPIPPIDPPR 191
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 29.9 bits (64), Expect = 2.2
Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 13/115 (11%)
Frame = +1
Query: 316 PGRSFSPNHSRRGPSSLQCRLLETITR*TMMEALHSVTRLRMG--PSRRRPEAPTVSYAE 489
PG + + +S + R L+ + + + + A H V LR P + E P +
Sbjct: 979 PGADETGGFQEKFENSSKKRFLKCVGKTSRIAATHPVDELRASKKPRLAKVEVPCNKETD 1038
Query: 490 STA----TLIPT-------ATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSAT 621
TL T T+GS +L LA S T NPK + PPS T
Sbjct: 1039 LDERVNDTLTSTDGQLSLRGTSGSVTNTLEDLAASISSTASCNPKDSSMIPPSGT 1093
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 598 HLTPPSATTEYRTTPREW-PPGQQPHDPPRRSSRTISXMP 714
HL PP T + R+ PP QP PPR+ S S +P
Sbjct: 1016 HLKPPGPTEQPVPPKRKASPPSAQPLPPPRKPSPPPSAVP 1055
>SB_53479| Best HMM Match : Zot (HMM E-Value=1.1)
Length = 251
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +1
Query: 160 WKTLTIMRTRPRIAELEDRCTSSFRLTNTTPYIDRMTAKMKSMSRDQFSGCHPGRSFSPN 339
W+ + TR + D T+ ++ TT I R++ + +M+ D +G H G + PN
Sbjct: 135 WQDNILTFTRLELNLRGDITTTLHCVSATTAGIQRLSHQ--AMTGDPRAGVHCGPAPPPN 192
Query: 340 HS--RRGPSSLQCRLLETITR*TMME 411
HS R PSS T MME
Sbjct: 193 HSVITRAPSSCVAGSTYTSAEIEMME 218
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/91 (25%), Positives = 32/91 (35%)
Frame = +1
Query: 445 PSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATT 624
P P T ++ T PT T ++PT+ T AT ++QT ATT
Sbjct: 384 PPTTTPSKATAPISDPMTTTTPTTTKATTPTT--TKATASTQTAAEANTFLSTQKTDATT 441
Query: 625 EYRTTPREWPPGQQPHDPPRRSSRTISXMPT 717
T+ E Q S+ T T
Sbjct: 442 SQSTSTTEATKSQTTKATTTLSTSTTKATTT 472
>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1446
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 514 ATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRT--TPREWPPGQQP 669
+TNGSSP+ T A ++Q K + PP+ T+ Y T T PPG P
Sbjct: 1081 STNGSSPSCQYTYADRSTQEKPL--------PPTRTSSYITAVTSAAHPPGPHP 1126
>SB_8051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = +1
Query: 448 SRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTE 627
++++P P+ + + AT + T + S P+ + T TK H P T
Sbjct: 713 TKQQPWGPSHNPRDQ-ATTLGTKSQPSGPSQNIGDQATTLGTKPKPSGPSH-NPGDQATT 770
Query: 628 YRTTPREWPPGQQPHD 675
T P+ W P Q P D
Sbjct: 771 LGTKPKPWGPSQNPGD 786
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +1
Query: 457 RPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRT 636
RP+ P S+ S A P+++ G++ S L +S+ P + + A+ + R
Sbjct: 103 RPQVPPASHPNS-AQYPPSSSFGANMPSNQVLNGPSSRGTPP-PGSRQMDQTGASQQTRQ 160
Query: 637 TPREWPPGQQPH 672
PR PP QQP+
Sbjct: 161 PPRSGPPVQQPY 172
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/73 (28%), Positives = 32/73 (43%)
Frame = +1
Query: 478 SYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPREWPP 657
SY ++ L T T S+ T A++++ T+ H P S + Y+T P PP
Sbjct: 244 SYTAASVYLSETTTAASAYPPSYTAASVSTSTEPYYYYDPHQAPESDMS-YQTAPGYPPP 302
Query: 658 GQQPHDPPRRSSR 696
PH R +R
Sbjct: 303 QYMPHPRMRPPTR 315
>SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3)
Length = 531
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = +1
Query: 466 APTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTT 639
AP + A +TAT PT T ++PT+ L T T+ T P T P+ TT TT
Sbjct: 11 APATTTAPTTATA-PTTT--TAPTTNTALTTTTAPTTTTAPTT--TTAPTTTTAPTTT 63
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/83 (27%), Positives = 32/83 (38%)
Frame = +1
Query: 457 RPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRT 636
+PE T S E PT T ++ + T+ T PK T P++TT T
Sbjct: 270 QPEGTTASTPEVPGPTQPTQTKKTTTKPVSQPGETTAST----PKAPGPTQPASTTIEAT 325
Query: 637 TPREWPPGQQPHDPPRRSSRTIS 705
E PG P + T+S
Sbjct: 326 PQPETQPGASTAKAPGSTEPTVS 348
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +1
Query: 508 PTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPREWPPGQQPHDPPRR 687
PT+ N +SP S T+ K+ P T P +T+ T E PG+ P+
Sbjct: 196 PTSPNNASPQSSTRPGETTAIPKQTGP-----TQPPGSTKITTPQHETKPGETTVSTPKA 250
Query: 688 SSRT 699
T
Sbjct: 251 PGPT 254
>SB_57603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/69 (30%), Positives = 29/69 (42%)
Frame = +1
Query: 490 STATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPREWPPGQQP 669
S T +P +GS P T +++ TKR +TP +T P PP + P
Sbjct: 317 SLNTDLPFDASGSIPIGHTTFGSVSPSTKRQIAHRVKITP-------KTVPLGAPPTRGP 369
Query: 670 HDPPRRSSR 696
PRR R
Sbjct: 370 PTRPRRGLR 378
>SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1455
Score = 29.1 bits (62), Expect = 3.8
Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 10/92 (10%)
Frame = +1
Query: 469 PTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTT--- 639
P S +P+A NGSSP S T A TS + ++P P + R
Sbjct: 623 PYTSSGYKDIPTMPSAWNGSSPLSSPTSA--TSLQELISPSSNIWASPDRVNKERVVDAL 680
Query: 640 -------PREWPPGQQPHDPPRRSSRTISXMP 714
R+ PG++P+ P I MP
Sbjct: 681 SGNRVLYDRKHTPGRRPYSPAFEDDAIIKAMP 712
>SB_4999| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1054
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +3
Query: 417 TFGYEAADGSFKEETRG-TDCVVR-GKYGYIDPDGNKREFTYV 539
+ G+ +DG + + ++ TD ++R + + DP GNKRE ++
Sbjct: 834 SMGWARSDGEYYQFSKSFTDDILRIDSHSFEDPQGNKREGVFI 876
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 457 RPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPK 591
+ E P+ + L T ++P ++ TL+++TSQTK+ P+
Sbjct: 3934 KEEFPSKPSTSLSTDLADTLELNTTPATVDTLSSITSQTKKKTPQ 3978
>SB_52131| Best HMM Match : AIRS_C (HMM E-Value=1.69978e-42)
Length = 1371
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 536 VGELPFVAVGINVAVLSAYDTVGASGLLLEGPIRSLVTE-CKASIIV 399
VG L G+ V LS + TVG++ + E PI+ LV C A + V
Sbjct: 718 VGPLHTPVAGVAVTALSHFHTVGSATAVGEQPIKCLVDPGCGARMTV 764
>SB_37854| Best HMM Match : MGC-24 (HMM E-Value=4.9)
Length = 870
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 508 PTATNGSS-PTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPREWPPGQQPHDPPR 684
PT ++G+ PT+ T+ P H T + T+ TPR PP PPR
Sbjct: 698 PTPSDGTVYPTATTITITVAITLTYSGPHDDHRT--DSDTDNDDTPRPIPPALGVPTPPR 755
Query: 685 RSSRTISXM 711
++S + M
Sbjct: 756 KNSFGLHAM 764
>SB_20579| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.39)
Length = 721
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/70 (24%), Positives = 29/70 (41%)
Frame = +1
Query: 445 PSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATT 624
P+ +PE PT+S +E T +A ++P + T R + +PP +T
Sbjct: 539 PAAPQPE-PTISQSEPTIRQSESAAKDTAPEAPAQPPTAADPVSRSTTPTRPTSPPPKST 597
Query: 625 EYRTTPREWP 654
+ P P
Sbjct: 598 SISSLPDSAP 607
>SB_51468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1626
Score = 28.3 bits (60), Expect = 6.6
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +1
Query: 421 SVTRLRMGPSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQH 600
++T ++ S + P+V S +T T+T PT++ +L ++ S T + P Q
Sbjct: 340 NITIPQVSSSSWPAQTPSVLGVTSPSTTTSTSTAAVYPTAVSSLVSVASSTHMIQPS-QA 398
Query: 601 LTPPSATTEYRTTPREWPP-GQQPHDPPRRSSRTISXMP 714
T +A+ TP W P Q + P + + S P
Sbjct: 399 KTIQTAS----KTPPVWVPLSQLNYQIPPQGNTAASVAP 433
>SB_37962| Best HMM Match : Tcp10_C (HMM E-Value=5.9e-36)
Length = 1290
Score = 28.3 bits (60), Expect = 6.6
Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 1/108 (0%)
Frame = +1
Query: 349 RGPSSLQCRLLETITR*TMMEALHSVTRLRMGPSRRRPEAPTVS-YAESTATLIPTATNG 525
+ PS+ R T + +H R G ++ P TVS A P
Sbjct: 249 QSPSAQDNTNFNKCQRFTASQLMHGQIRPGTGGAQFNPAFRTVSGLAGGNVNGRPVQPLL 308
Query: 526 SSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPREWPPGQQP 669
SP ++ T + ++ P +P A+ +Y +P W P QP
Sbjct: 309 MSPQHFISSTTGSGFSRESYP-----SPVQASPQYAISPYSWSPNDQP 351
>SB_30162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 160 WKTLTIMRTRPRIAELEDRCTSSFRLTNTTPYIDRMTAKMKSMSRDQFSGCHPGRSFSPN 339
W+ + TR + D T+ ++ TT I R++ + +M+ D +G H G + PN
Sbjct: 29 WQDNILTFTRLELNLRGDITTTLHCVSATTAGIQRLSHQ--AMTGDPRAGVHCGPAPPPN 86
Query: 340 HS--RRGPSS 363
HS R PSS
Sbjct: 87 HSVITRAPSS 96
>SB_8791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 613 SATTEYRTTPREWPPGQQPHDPPRRSSRT 699
S T + TP++ P +PPRRSSRT
Sbjct: 146 SITKTKQATPKDASDVTTPAEPPRRSSRT 174
>SB_57471| Best HMM Match : TatC (HMM E-Value=0.27)
Length = 687
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +1
Query: 511 TATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATT---EYRTTPREWP 654
TAT SP+S+ + TL S L PS +T Y TT E P
Sbjct: 86 TATTAISPSSVANMTTLVSSVNLTRSSLSTTLIPSISTSILSYNTTVIETP 136
>SB_39625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 902
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -1
Query: 542 RDVGELPFVAVGINVAVLSAYDTVGASGLLLEGPIRSLVTECKASIIVHLVIVSN 378
R VGE PF VG++ A Y SG +G L+ C + VHL ++ N
Sbjct: 634 RTVGERPFQVVGLDYAGPLPY----KSGNSSDGKAYILLITCSLTRAVHLEVLPN 684
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -1
Query: 542 RDVGELPFVAVGINVAVLSAYDTVGASGLLLEGPIRSLVTECKASIIVHLVIVSN 378
R VGE PF VG++ A Y SG +G L+ C + VHL ++ N
Sbjct: 62 RTVGERPFQVVGLDYAGPLPY----KSGNSSDGKAYILLITCSLTRAVHLEVLPN 112
>SB_23226| Best HMM Match : Herpes_UL43 (HMM E-Value=1.9)
Length = 749
Score = 28.3 bits (60), Expect = 6.6
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +1
Query: 421 SVTRLRMGPSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQH 600
++T ++ S + P+V S +T T+T PT++ +L ++ S T + P Q
Sbjct: 320 NITIPQVSSSSWPAQTPSVLGVTSPSTTTSTSTAAVYPTAVSSLVSVASSTHMIQPS-QA 378
Query: 601 LTPPSATTEYRTTPREWPP-GQQPHDPPRRSSRTISXMP 714
T +A+ TP W P Q + P + + S P
Sbjct: 379 KTIQTAS----KTPPVWVPLSQLNYQIPPQGNTAASVAP 413
>SB_17889| Best HMM Match : Patched (HMM E-Value=0.14)
Length = 925
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 286 YSSSWRSFCLYMESYWSAGTSWYT 215
YS R F Y + W GT+WY+
Sbjct: 528 YSKLTRRFSSYQVAVWGKGTNWYS 551
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Frame = +1
Query: 463 EAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQH--LTPPSA---TTE 627
+APT + A ++ T +PT+ PTSL+ T T T + H + P S+ T+
Sbjct: 259 KAPTTTIAPTSTTELPTSFTKVVPTSLLE-PTTTIPTSATRSSMAHTSIAPTSSLAPTSS 317
Query: 628 YRTTPREWPPGQQPHDP 678
T P P +P
Sbjct: 318 LAPTSSVGPTTSPPPEP 334
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 27.9 bits (59), Expect = 8.8
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 8/101 (7%)
Frame = +1
Query: 400 TMMEALHSVTRLRMGPSRRRPEAPTVSYAESTATLIPTATNGSSPT--SLVTLATLTSQT 573
T++ H++ LR PS PT + T P + PT S A T
Sbjct: 155 TLLIPRHNLFILRQHPSY----PPTQPFYPPTQPFYPPTPSSYPPTQPSYPPTAPSYPPT 210
Query: 574 KRMNPKLQHLTPPSATT------EYRTTPREWPPGQQPHDP 678
P + PP+A + Y TP +PP Q H P
Sbjct: 211 PSSYPPIAASYPPTAPSYNPTAPSYPPTPSSYPPTQPSHPP 251
>SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1918
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/83 (28%), Positives = 38/83 (45%)
Frame = +1
Query: 334 PNHSRRGPSSLQCRLLETITR*TMMEALHSVTRLRMGPSRRRPEAPTVSYAESTATLIPT 513
P R+ PSS+ ++ M VT ++MG + +RP P +S S+ P
Sbjct: 1179 PQGDRQLPSSMSAAANSSMWPQDAMRFARPVTSMQMGMATQRP--PDMSGVSSSQRNDPL 1236
Query: 514 ATNGSSPTSLVTLATLTSQTKRM 582
A++ +P A SQTK+M
Sbjct: 1237 ASHHVNPE-----ARPVSQTKKM 1254
>SB_25197| Best HMM Match : TatC (HMM E-Value=1.8)
Length = 622
Score = 27.9 bits (59), Expect = 8.8
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Frame = +1
Query: 376 LLETITR*TMMEALHSVTRLRMGPSRRRPEAPTVSYAESTATLIP----TATNGSSPTSL 543
L+++IT T ++ R R S + +VSY +T T P TAT SP+S+
Sbjct: 121 LVQSITAPTSPNV--TINRTREANSTMILSSTSVSY-NTTLTPAPDAASTATTAISPSSV 177
Query: 544 VTLATLTSQTKRMNPKLQHLTPPSATT---EYRTT 639
+ TL S L PS +T Y TT
Sbjct: 178 GNMTTLVSSVNLTRSSLSTTLIPSISTSILSYNTT 212
>SB_20796| Best HMM Match : RVT_1 (HMM E-Value=0.047)
Length = 660
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -3
Query: 204 LCYPGPGSHNRKSL 163
LCYPGPG++N+ +L
Sbjct: 647 LCYPGPGAYNQLNL 660
>SB_242| Best HMM Match : AFP (HMM E-Value=0.45)
Length = 147
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 472 TVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNP-KLQHLTPPSATTEYRTTPRE 648
T SY ST + PT T+ + TS + + TS T + T ++TT YR+TP
Sbjct: 35 TTSYT-STTSYTPT-TSYTCTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYRSTPSY 92
Query: 649 WP 654
P
Sbjct: 93 TP 94
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,571,416
Number of Sequences: 59808
Number of extensions: 485225
Number of successful extensions: 2086
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2010
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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