BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P02_F_J07 (719 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g40070.1 68415.m04923 expressed protein 37 0.015 At5g14540.1 68418.m01704 proline-rich family protein contains pr... 35 0.062 At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 33 0.25 At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (AB... 32 0.44 At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 31 0.58 At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 31 1.0 At2g20990.1 68415.m02485 C2 domain-containing protein (sytA) sim... 30 1.3 At2g26920.1 68415.m03229 ubiquitin-associated (UBA)/TS-N domain-... 30 1.8 At5g39760.1 68418.m04816 zinc finger homeobox protein-related / ... 29 2.3 At3g45740.1 68416.m04943 hydrolase family protein / HAD-superfam... 29 2.3 At5g35430.1 68418.m04213 expressed protein 29 3.1 At3g50580.1 68416.m05532 proline-rich family protein contains pr... 29 3.1 At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 29 3.1 At4g10380.1 68417.m01703 major intrinsic family protein / MIP fa... 29 4.1 At2g19580.1 68415.m02287 senescence-associated protein-related s... 29 4.1 At4g01030.1 68417.m00140 pentatricopeptide (PPR) repeat-containi... 28 5.4 At2g38120.1 68415.m04679 amino acid permease, putative (AUX1) id... 28 5.4 At2g21050.1 68415.m02499 amino acid permease, putative similar t... 28 5.4 At1g04300.1 68414.m00421 meprin and TRAF homology domain-contain... 28 5.4 At2g18510.1 68415.m02157 pre-mRNA splicing factor, putative simi... 28 7.2 At1g07350.1 68414.m00783 transformer serine/arginine-rich ribonu... 28 7.2 At5g54350.1 68418.m06768 expressed protein ; expression support... 27 9.5 At5g04970.1 68418.m00526 pectinesterase, putative contains simil... 27 9.5 At4g25820.1 68417.m03714 xyloglucan:xyloglucosyl transferase / x... 27 9.5 At1g04450.1 68414.m00437 p21-rho-binding domain-containing prote... 27 9.5 >At2g40070.1 68415.m04923 expressed protein Length = 607 Score = 36.7 bits (81), Expect = 0.015 Identities = 24/88 (27%), Positives = 35/88 (39%) Frame = +1 Query: 391 TR*TMMEALHSVTRLRMGPSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQ 570 T+ T M S++ R+ P+ +P T A S P+ T S+ S T S Sbjct: 233 TKPTPMSRSTSLSSSRLTPTASKPTTSTARSAGSVTRSTPSTTTKSAGPSRSTTPLSRST 292 Query: 571 TKRMNPKLQHLTPPSATTEYRTTPREWP 654 + P + PPS T +TP P Sbjct: 293 ARSSTPTSRPTLPPSKTISRSSTPTRRP 320 >At5g14540.1 68418.m01704 proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965 Length = 547 Score = 34.7 bits (76), Expect = 0.062 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 4/102 (3%) Frame = +1 Query: 403 MMEALHSVTRLRMGPSRRRPEAPTVSY---AESTATLIPTATNGSSPTSLVTLATLTSQT 573 ++EA +++L++ ++PE + A+ A+L + ++P SL T L Q Sbjct: 207 IVEAQLQLSKLQLSKVNQQPETHSTHVEPTAQPPASLPQPPASAAAPPSL-TQQGLPPQQ 265 Query: 574 KRMNPKLQH-LTPPSATTEYRTTPREWPPGQQPHDPPRRSSR 696 P QH L+PPS + P ++ P Q+P+ PP S+ Sbjct: 266 FIQPPASQHGLSPPSL--QLPQLPNQFSPQQEPYFPPSGQSQ 305 >At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19) non-consensus splice site at the intron:exon boundary (AT:exon) Length = 247 Score = 32.7 bits (71), Expect = 0.25 Identities = 27/92 (29%), Positives = 33/92 (35%), Gaps = 8/92 (8%) Frame = +1 Query: 463 EAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEY---- 630 + P S ST T P T T+ T T P +TPP A T Sbjct: 25 QGPAASPVTSTTTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASPVTPPPAVTPTSPPA 84 Query: 631 -RTTP---REWPPGQQPHDPPRRSSRTISXMP 714 + P PP Q P PP S+ T+S P Sbjct: 85 PKVAPVISPATPPPQPPQSPP-ASAPTVSPPP 115 >At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (ABI3) identical to abscisic acid-insensitive protein 3 GI:16146 SP:Q01593 from [Arabidopsis thaliana], (Plant Cell 4 (10), 1251-1261 (1992)) Length = 720 Score = 31.9 bits (69), Expect = 0.44 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = +1 Query: 445 PSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQT 573 PS ++PEAP S A N +SP++ V +A+ TSQT Sbjct: 676 PSGQKPEAPPSSAATKRQNKSQRNINNNSPSANVVVASPTSQT 718 >At5g14920.1 68418.m01750 gibberellin-regulated family protein similar to SP|P46689 Gibberellin-regulated protein 1 precursor {Arabidopsis thaliana}; contains Pfam profile PF02704: Gibberellin regulated protein Length = 275 Score = 31.5 bits (68), Expect = 0.58 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 1/80 (1%) Frame = +1 Query: 445 PSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATT 624 P+ + P +Y T T+ P T+ P + + + Q P + PP+ T Sbjct: 112 PTVKPPSVQPPTYKPPTPTVKPPTTSPVKPPTTPPVQSPPVQPPTYKPPTSPVKPPTTTP 171 Query: 625 EYRTTPREWPPGQQP-HDPP 681 + P PP Q P ++PP Sbjct: 172 PVK-PPTTTPPVQPPTYNPP 190 >At5g53870.1 68418.m06701 plastocyanin-like domain-containing protein contains similarity to SP|Q02917 Early nodulin 55-2 precursor {Glycine max}; PF02298: Plastocyanin-like domain Length = 370 Score = 30.7 bits (66), Expect = 1.0 Identities = 23/88 (26%), Positives = 35/88 (39%) Frame = +1 Query: 451 RRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEY 630 R +P AP S S + P ++ SP S V A+ S+++ + PP +++ Sbjct: 131 RNQPSAPAHSPVPSVSPTQPPKSH--SPVSPVAPASAPSKSQPPRSSVSPAQPPKSSSPI 188 Query: 631 RTTPREWPPGQQPHDPPRRSSRTISXMP 714 TP P H P S S P Sbjct: 189 SHTPALSPSHATSHSPATPSPSPKSPSP 216 >At2g20990.1 68415.m02485 C2 domain-containing protein (sytA) similar to Ca2+-dependent lipid-binding protein (CLB1) GI:2789434 from [Lycopersicon esculentum] Length = 541 Score = 30.3 bits (65), Expect = 1.3 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = -3 Query: 264 SVYIWSRIGQPERAGTPVLQLCYPGPGSHNRKSL 163 SVY W ++G PE+ G VL L P H +L Sbjct: 329 SVYDWEQVGNPEKMGMNVLALKEMVPDEHKAFTL 362 >At2g26920.1 68415.m03229 ubiquitin-associated (UBA)/TS-N domain-containing protein contains Pfam profile PF00627: UBA/TS-N domain Length = 646 Score = 29.9 bits (64), Expect = 1.8 Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 3/129 (2%) Frame = +1 Query: 163 KTLTIMRTRPRIAELEDRCTSSFRLTNTTPYIDRMTAKMKSMSRDQFSGCHPGRSFSPNH 342 +++ +MR RP++ TSS T+ + MKS Q RS SPNH Sbjct: 408 ESVMVMRQRPQVVITNPVPTSSMSAPPTSWHPAASIEIMKSNGFMQTHNIPSARSPSPNH 467 Query: 343 SRRGP--SSLQCRLLETITR*TMMEALHSVTRLRMGP-SRRRPEAPTVSYAESTATLIPT 513 LQ + + T ++ S+ R G +R +P +S A S Sbjct: 468 LNPNQVYQQLQYQNQKRFTNNNQVDPHGSMARGNGGQWTRNTASSPPISAASSLGLFSAV 527 Query: 514 ATNGSSPTS 540 + G+S S Sbjct: 528 GSAGTSGAS 536 >At5g39760.1 68418.m04816 zinc finger homeobox protein-related / ZF-HD homeobox protein-related predicted proteins, Arabidopsis thaliana Length = 334 Score = 29.5 bits (63), Expect = 2.3 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = +1 Query: 583 NPKLQHLTPPSATTEYRTTPREWPPGQQPHDPPR 684 N Q PPS EY+ R PP P PPR Sbjct: 112 NDSSQIPPPPSTAVEYQPHHRHHPPPPPPPPPPR 145 >At3g45740.1 68416.m04943 hydrolase family protein / HAD-superfamily protein contains TIGRfam domians TIGR01460: HAD-superfamily hydrolase, subfamily IIA and TIGR01456: HAD-superfamily subfamily IIA hydrolase, TIGR01456, CECR5 Length = 376 Score = 29.5 bits (63), Expect = 2.3 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = +3 Query: 93 VLCILLATGIAAGAR--PRPRLQQVEDSYDYENQAQDSRAGGQVYQLVPADQYDSIYRQ 263 VLC +L TG G P+P L D DY+ + R G +++ ++ I+ + Sbjct: 208 VLCDILRTGGLPGKEIGPQPHLYIANDDLDYQTEFPTERLGMGAFRIALESIFNRIHEK 266 >At5g35430.1 68418.m04213 expressed protein Length = 786 Score = 29.1 bits (62), Expect = 3.1 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = +1 Query: 196 IAE-LEDRCTSSFRLTNTTPYIDRMTAKMKSMSRDQFSGCHPGR--SFSPNHSRRGPSSL 366 IAE +D C++S +L + + + ++ S ++DQ +PG S S +H R ++L Sbjct: 70 IAEYFKDGCSNSEKLVEVLKRVKKQSEQLSSAAKDQVEAANPGTNVSVSKDHFDRTVTTL 129 >At3g50580.1 68416.m05532 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 265 Score = 29.1 bits (62), Expect = 3.1 Identities = 19/66 (28%), Positives = 25/66 (37%) Frame = +1 Query: 508 PTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPREWPPGQQPHDPPRR 687 PT SP SL + K +P PP A + +TP PP + PP Sbjct: 102 PTPKKSPSPPSLTPFVPHPTPKKSPSPPPTPSLPPPAPKKSPSTPSLPPPTPKKSPPPPP 161 Query: 688 SSRTIS 705 S + S Sbjct: 162 SHHSSS 167 Score = 27.9 bits (59), Expect = 7.2 Identities = 22/83 (26%), Positives = 33/83 (39%) Frame = +1 Query: 466 APTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPSATTEYRTTPR 645 AP +S + ST IP+ + SP + T + +P LTP + +P Sbjct: 70 APAISISPSTP--IPSTPSTPSPPPPAPKKSPPPPTPKKSPSPPSLTPFVPHPTPKKSPS 127 Query: 646 EWPPGQQPHDPPRRSSRTISXMP 714 P P P++S T S P Sbjct: 128 PPPTPSLPPPAPKKSPSTPSLPP 150 >At1g62440.1 68414.m07044 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 826 Score = 29.1 bits (62), Expect = 3.1 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%) Frame = +1 Query: 436 RMGPS-RRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPP 612 +M P+ R P P+ + S P ++ SP+ AT + +M+P ++ PP Sbjct: 447 KMSPTFRATPPPPSSKMSPSFRATPPPPSSKMSPSFR---ATPPPPSSKMSPSVKAYPPP 503 Query: 613 SATTEYRTTP----REWPPGQQPHDPP 681 EY +P E P + + PP Sbjct: 504 PPPPEYEPSPPPPSSEMSPSVRAYPPP 530 >At4g10380.1 68417.m01703 major intrinsic family protein / MIP family protein contains Pfam profile: MIP PF00230 Length = 304 Score = 28.7 bits (61), Expect = 4.1 Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = -1 Query: 641 GVVRYSVVALGGVRCWSF--GFILFVWLVRVARVTRDVGELPFVAVGINVA--VLSAYDT 474 G V V+LG F FIL + VA TR VGEL +AVG V +L A + Sbjct: 183 GGVTIPSVSLGQAFALEFIITFILLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPS 242 Query: 473 VGASGLLLEGPIRSL 429 G S P+R+L Sbjct: 243 TGGS----MNPVRTL 253 >At2g19580.1 68415.m02287 senescence-associated protein-related similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] gi|3551954|gb|AAC34855; contains a transmembrane 4 family signature; rare (GC) splice donor consensus found instead of (GT) at intron 2. Length = 270 Score = 28.7 bits (61), Expect = 4.1 Identities = 15/60 (25%), Positives = 35/60 (58%), Gaps = 4/60 (6%) Frame = -1 Query: 299 WSLLILFILAVILSIYGVVLVSRNE----LVHLSSSSAILGLVLIIVRVFHLLQTRPGSS 132 W +++L +L +++S G + + + V+L + ++GL+L+++ +F + TRP S Sbjct: 43 WPVVVLGVLILVVSATGFIGAYKYKETLLAVYLCCMAILIGLLLVVL-IFAFVVTRPDGS 101 >At4g01030.1 68417.m00140 pentatricopeptide (PPR) repeat-containing protein contains INTERPRO:IPR002885 PPR repeats Length = 500 Score = 28.3 bits (60), Expect = 5.4 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +1 Query: 142 GLVCSRWKTLTIMRTRPRIAELEDRCTSSFRLTNTTPYIDRMTAKMKSMS 291 GLV WK +MR+R I + C+ L + Y+D +++MS Sbjct: 243 GLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS 292 >At2g38120.1 68415.m04679 amino acid permease, putative (AUX1) identical to AUX1 GI:1531758 from [Arabidopsis thaliana] Length = 485 Score = 28.3 bits (60), Expect = 5.4 Identities = 13/56 (23%), Positives = 20/56 (35%) Frame = -2 Query: 280 SSWRSFCLYMESYWSAGTSWYTCPPALLSWAWFXXXXXXSTCCKRGLGRAPAAIPV 113 ++WR + + T + C P W + C R L R P IP+ Sbjct: 308 NAWRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPI 363 >At2g21050.1 68415.m02499 amino acid permease, putative similar to AUX1 [Arabidopsis thaliana] GI:1531758; contains Pfam profile PF01490: Transmembrane amino acid transporter protein Length = 483 Score = 28.3 bits (60), Expect = 5.4 Identities = 13/54 (24%), Positives = 19/54 (35%) Frame = -2 Query: 274 WRSFCLYMESYWSAGTSWYTCPPALLSWAWFXXXXXXSTCCKRGLGRAPAAIPV 113 +R F + + T + C P W + CKR R P IP+ Sbjct: 304 YRDFAVVLMLIHQFITFGFACTPLYFVWEKLIGMHECRSMCKRAAARLPVVIPI 357 >At1g04300.1 68414.m00421 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471;contains Pfam PF00917: Meprin And TRAF-Homology (MATH) domain Length = 1052 Score = 28.3 bits (60), Expect = 5.4 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 4/93 (4%) Frame = +1 Query: 448 SRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTLATLTSQTKRMNPKLQHLTPPS---A 618 ++ +PE ++S A+ AT S + +V + + SQT + +Q L+ P A Sbjct: 699 TQTKPEKKSISTADGIPNRKVLATGPPSSSQVVLPSDIQSQTVGLRADMQKLSAPKQPPA 758 Query: 619 TTEYRTTPREWPPGQQPHDPPRRSS-RTISXMP 714 TT R + P +P SS +T + +P Sbjct: 759 TTISRPSSAPIIPAMRPSPITVSSSVQTTTSLP 791 >At2g18510.1 68415.m02157 pre-mRNA splicing factor, putative similar to SP|Q15427 Splicing factor 3B subunit 4 (Spliceosome associated protein 49) (SAP 49) (SF3b50) (Pre-mRNA splicing factor SF3b 49 kDa subunit) {Homo sapiens}; contains Pfam profile PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Length = 363 Score = 27.9 bits (59), Expect = 7.2 Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 2/38 (5%) Frame = +1 Query: 607 PPSATTEYRTTPREWPPGQQPHD--PPRRSSRTISXMP 714 PP Y+T P WP Q H PP R MP Sbjct: 258 PPPPPQVYQTQPPSWPSQPQQHSMVPPPMQFRPPQGMP 295 >At1g07350.1 68414.m00783 transformer serine/arginine-rich ribonucleoprotein, putative similar to GB:Y09506 from [Nicotiana tabacum] (Plant Mol. Biol. 35 (3), 261-269 (1997)) Length = 382 Score = 27.9 bits (59), Expect = 7.2 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 Query: 283 SMSRDQFSGCHPGRSFSPNHSRRGPSS 363 S SR + GRS+SP++ RRG SS Sbjct: 188 SRSRSRSYSSDRGRSYSPSYGRRGRSS 214 >At5g54350.1 68418.m06768 expressed protein ; expression supported by MPSS Length = 279 Score = 27.5 bits (58), Expect = 9.5 Identities = 26/110 (23%), Positives = 49/110 (44%) Frame = +1 Query: 223 SSFRLTNTTPYIDRMTAKMKSMSRDQFSGCHPGRSFSPNHSRRGPSSLQCRLLETITR*T 402 SS+ T+ + Y T + + R+ F +PG S + HS+ S + + +E + + Sbjct: 136 SSWSNTDPSFYRKLFTPVLPCVPRNNFVAGNPGNSSASTHSKSLFSMGKNQAMENGSGSS 195 Query: 403 MMEALHSVTRLRMGPSRRRPEAPTVSYAESTATLIPTATNGSSPTSLVTL 552 ++L S+ + + E P +T L P+ NGS + L +L Sbjct: 196 HSKSLFSMEK------NKAVEPPVAPPNGTTDLLFPSPENGSGSSHLKSL 239 >At5g04970.1 68418.m00526 pectinesterase, putative contains similarity to pectinesterase from Vitis vinifera GI:15081598, Prunus persica SP|Q43062; contains Pfam profile PF01095 pectinesterase Length = 624 Score = 27.5 bits (58), Expect = 9.5 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Frame = +1 Query: 607 PPSAT-TEYRTTPREWPPGQQPHDPPRRSSRTISXMP 714 PPS T+ T P PP Q P PP +S S +P Sbjct: 47 PPSQPPTQPPTQPPSHPPTQPPTPPPSQSPSQPSPLP 83 >At4g25820.1 68417.m03714 xyloglucan:xyloglucosyl transferase / xyloglucan endotransglycosylase / endo-xyloglucan transferase (XTR9) identical to xyloglucan endotransglycosylase GI:4218963 from [Arabidopsis thaliana] Length = 287 Score = 27.5 bits (58), Expect = 9.5 Identities = 10/34 (29%), Positives = 17/34 (50%) Frame = -2 Query: 286 YSSSWRSFCLYMESYWSAGTSWYTCPPALLSWAW 185 + +S+R+F ++ + W TC P SW W Sbjct: 214 FKASYRNFNDQSSCSRTSSSKWVTCEPNSNSWMW 247 >At1g04450.1 68414.m00437 p21-rho-binding domain-containing protein contains Pfam PF00786: P21-Rho-binding domain Length = 220 Score = 27.5 bits (58), Expect = 9.5 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +1 Query: 592 LQHLTPPSATTEYRTTPREWPPGQQPHDPPRRSS 693 LQ L PP+ +++ T R+ Q PPRR+S Sbjct: 83 LQELLPPTDKPKHKKTRRKSETVSQNGSPPRRNS 116 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,391,489 Number of Sequences: 28952 Number of extensions: 335480 Number of successful extensions: 1257 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 1162 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1251 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1565336320 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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