Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_J06
         (819 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          25   2.8  
AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding pr...    25   3.7  
AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding pr...    25   3.7  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   4.9  

>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -1

Query: 675 QEYQHLGQQSQLLCIDQHEHDVQ**WV-CPTLLQVS 571
           +E + +   ++++C+DQH   +   W+ C TL  +S
Sbjct: 293 EEMRKVRLAARVVCVDQHRPSIPSRWIACDTLHAIS 328


>AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding
           protein AgamOBP4 protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 331 SMSKKGRISFSLIRSQIILVISSPRMST 248
           +M+KKG ISFS   +QI  ++  P M T
Sbjct: 83  TMTKKGEISFSKTMAQIEAML-PPEMKT 109


>AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding
           protein protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 331 SMSKKGRISFSLIRSQIILVISSPRMST 248
           +M+KKG ISFS   +QI  ++  P M T
Sbjct: 83  TMTKKGEISFSKTMAQIEAML-PPEMKT 109


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 653  NKVSCFVLISMSMTSNDDGFV 591
            ++V+C  L+SM+M  N DG V
Sbjct: 1485 HRVACKRLVSMNMPLNSDGTV 1505


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 821,307
Number of Sequences: 2352
Number of extensions: 17093
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)