Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_J06
(819 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical pr... 303 1e-82
Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical pr... 268 3e-72
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical pr... 29 5.3
X75331-1|CAA53080.1| 620|Caenorhabditis elegans acetylcholinest... 29 5.3
U58731-1|AAB00593.1| 620|Caenorhabditis elegans Abnormal acetyl... 29 5.3
U40417-9|AAA81417.2| 120|Caenorhabditis elegans Hypothetical pr... 29 5.3
>Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical
protein F59B8.2 protein.
Length = 412
Score = 303 bits (743), Expect = 1e-82
Identities = 142/197 (72%), Positives = 162/197 (82%), Gaps = 1/197 (0%)
Frame = +3
Query: 228 KIKAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEA 407
KI+ G +V++ GDEMTRIIWDLIKEKLILP++D+ +H +DLG+E+RD TDDQVTID A A
Sbjct: 5 KIQGGDIVEMQGDEMTRIIWDLIKEKLILPYVDLNVHFFDLGIEHRDATDDQVTIDAANA 64
Query: 408 IKKYNVGIKCATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTG 587
KYNV +KCATITPDE RVEEFKLKKMWKSPNGTIRNILGGTVFRE II KN+PRLV
Sbjct: 65 TLKYNVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIIVKNVPRLVNT 124
Query: 588 WDKPIIIGRHAHADQYKATDFVVPGAGTLEIIFKPESG-EAIKHVXHXYKGAGVXLAMFN 764
W KPIIIGRHAHADQYKATDFVVPGAG LEI F G + I+ +KG GV L+M+N
Sbjct: 125 WSKPIIIGRHAHADQYKATDFVVPGAGKLEIKFVSADGTQTIQETVFDFKGPGVSLSMYN 184
Query: 765 TDASIIDXAHSSFKFAL 815
TD SI D AH+SFK+AL
Sbjct: 185 TDDSIRDFAHASFKYAL 201
>Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical
protein C34F6.8 protein.
Length = 435
Score = 268 bits (657), Expect = 3e-72
Identities = 127/198 (64%), Positives = 153/198 (77%), Gaps = 2/198 (1%)
Frame = +3
Query: 228 KIKA-GPVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAE 404
KIK PVVD+ GDEMTRIIW IK KLILP+LD+++ YDLG+E RD+T+DQVTID A
Sbjct: 26 KIKVDNPVVDLDGDEMTRIIWKEIKNKLILPYLDLDIKYYDLGLEYRDETNDQVTIDAAH 85
Query: 405 AIKKYNVGIKCATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVT 584
AI +++VGIKCATITPDE R++EF LKKMW SPNGTIRNILGGTVFRE I+CKNIPRLV
Sbjct: 86 AILEHSVGIKCATITPDEARIKEFNLKKMWLSPNGTIRNILGGTVFREPILCKNIPRLVP 145
Query: 585 GWDKPIIIGRHAHADQYKATDFVVPGAGTLEIIF-KPESGEAIKHVXHXYKGAGVXLAMF 761
GW +PI IGRHA DQYK TD V+P TL+++ KP+ + + +V K GV LAM+
Sbjct: 146 GWTQPITIGRHAFGDQYKCTDLVIPSGSTLQLLVNKPDGSKDVHNVYDFKKSGGVGLAMY 205
Query: 762 NTDASIIDXAHSSFKFAL 815
NTD SI AHS F++AL
Sbjct: 206 NTDESIKGFAHSCFQYAL 223
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 315 PFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKKMW 494
P +D V ++ R + + + KK+ + T+ PDE+ VE KL K
Sbjct: 2175 PDVDDSEDVEEIMRRPRKRIGPKEEVVLLSVTKKHPHSYRTKTV-PDEEPVEIVKLVKNR 2233
Query: 495 KSPNGTIRNI 524
+ PN T+R +
Sbjct: 2234 RLPNATLREV 2243
>Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical
protein T26H8.4 protein.
Length = 561
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -2
Query: 473 FFNSLLIRSYGRTFDAHIVFLYGLSTINCNLIISLITIFH 354
F+NSL I S TF +F+ STI+ + +I LI IFH
Sbjct: 59 FYNSLSISS---TFP--FIFMTEFSTISTSFLILLIAIFH 93
>X75331-1|CAA53080.1| 620|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 620
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -1
Query: 411 LWPQHNQL*LDHQSYH-DFPYPSRRHVIQCPRKEESAF 301
+WP++N + +++ + + YPS + + PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560
>U58731-1|AAB00593.1| 620|Caenorhabditis elegans Abnormal
acetylcholinesterase protein1 protein.
Length = 620
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -1
Query: 411 LWPQHNQL*LDHQSYH-DFPYPSRRHVIQCPRKEESAF 301
+WP++N + +++ + + YPS + + PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560
>U40417-9|AAA81417.2| 120|Caenorhabditis elegans Hypothetical
protein T08A9.13 protein.
Length = 120
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +3
Query: 354 MENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKK 488
++ + + + ++C +A+ +Y+V K T+T E++ E KK
Sbjct: 44 LQKAKELEQRTRVECQQALDQYDVLKKIPTLTEQERKENETLTKK 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,215,076
Number of Sequences: 27780
Number of extensions: 397101
Number of successful extensions: 980
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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