Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_I18
(694 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39109| Best HMM Match : PT (HMM E-Value=5) 46 2e-05
SB_28751| Best HMM Match : Cyclin_N (HMM E-Value=3.6e-05) 34 0.095
SB_56517| Best HMM Match : CUB (HMM E-Value=0.0011) 34 0.13
SB_14845| Best HMM Match : DUF983 (HMM E-Value=0.015) 31 0.67
SB_5023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_54070| Best HMM Match : Phage_integr_N (HMM E-Value=0.041) 31 1.2
SB_50256| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_18443| Best HMM Match : Phage_attach (HMM E-Value=5.3) 30 2.0
SB_45146| Best HMM Match : DUF504 (HMM E-Value=9.8) 29 2.7
SB_18386| Best HMM Match : CH (HMM E-Value=2.8e-26) 29 3.6
SB_55679| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_50280| Best HMM Match : Marek_A (HMM E-Value=1.7) 29 4.7
SB_27782| Best HMM Match : Borrelia_orfA (HMM E-Value=0.1) 28 8.3
>SB_39109| Best HMM Match : PT (HMM E-Value=5)
Length = 231
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/111 (19%), Positives = 50/111 (45%)
Frame = -2
Query: 630 IAQILMRDSSAYFQTLIIPILMKDSSAYFQILTIPILMKDSSVYFQSLMTRTMMKNNLVY 451
+ Q+ S YF++ ++ + S YF++ + + S YF+S + + ++ Y
Sbjct: 38 VLQVASNSSRQYFKSPVLQVASTSSRQYFKLPVLQVASTSSREYFKSPVLQVASTSSREY 97
Query: 450 FRILTILIQMKDSSAYFPSLMTRTMMRNNLVYFRILTILIQMKDSSAYFRN 298
F+ + + S YF S + + ++ YF+ + + S YF++
Sbjct: 98 FKSPVLQVASTSSREYFKSRVLQVASTSSREYFKSRVLQVASTSSREYFKS 148
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/131 (18%), Positives = 56/131 (42%)
Frame = -2
Query: 690 FQILTIPILMKDSLVCLQILIAQILMRDSSAYFQTLIIPILMKDSSAYFQILTIPILMKD 511
F++ + + S + + Q+ S YF++ ++ + S YF+ + +
Sbjct: 66 FKLPVLQVASTSSREYFKSPVLQVASTSSREYFKSPVLQVASTSSREYFKSRVLQVASTS 125
Query: 510 SSVYFQSLMTRTMMKNNLVYFRILTILIQMKDSSAYFPSLMTRTMMRNNLVYFRILTILI 331
S YF+S + + ++ YF+ + + S YF S + + ++ YF+ + +
Sbjct: 126 SREYFKSRVLQVASTSSREYFKSRVLQVASTSSREYFKSRVLQVASTSSREYFKSRVLQV 185
Query: 330 QMKDSSAYFRN 298
S YF++
Sbjct: 186 ASTSSREYFKS 196
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/111 (19%), Positives = 49/111 (44%)
Frame = -2
Query: 630 IAQILMRDSSAYFQTLIIPILMKDSSAYFQILTIPILMKDSSVYFQSLMTRTMMKNNLVY 451
+ Q+ S YF++ ++ + S YF+ + + S YF+S + + ++ Y
Sbjct: 102 VLQVASTSSREYFKSRVLQVASTSSREYFKSRVLQVASTSSREYFKSRVLQVASTSSREY 161
Query: 450 FRILTILIQMKDSSAYFPSLMTRTMMRNNLVYFRILTILIQMKDSSAYFRN 298
F+ + + S YF S + + ++ YF+ + + S YF++
Sbjct: 162 FKSRVLQVASTSSREYFKSRVLQVASTSSREYFKSRVLQVASTSSREYFKS 212
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/111 (19%), Positives = 49/111 (44%)
Frame = -2
Query: 630 IAQILMRDSSAYFQTLIIPILMKDSSAYFQILTIPILMKDSSVYFQSLMTRTMMKNNLVY 451
+ Q+ S YF++ ++ + S YF+ + + S YF+S + + ++ Y
Sbjct: 118 VLQVASTSSREYFKSRVLQVASTSSREYFKSRVLQVASTSSREYFKSRVLQVASTSSREY 177
Query: 450 FRILTILIQMKDSSAYFPSLMTRTMMRNNLVYFRILTILIQMKDSSAYFRN 298
F+ + + S YF S + + ++ YF+ + + S YF++
Sbjct: 178 FKSRVLQVASTSSREYFKSRVLQVASTSSREYFKSRVLQVASTSSREYFKS 228
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/131 (18%), Positives = 56/131 (42%)
Frame = -2
Query: 690 FQILTIPILMKDSLVCLQILIAQILMRDSSAYFQTLIIPILMKDSSAYFQILTIPILMKD 511
F+ + + S ++ + Q+ S YF++ ++ + S YF+ + +
Sbjct: 50 FKSPVLQVASTSSRQYFKLPVLQVASTSSREYFKSPVLQVASTSSREYFKSPVLQVASTS 109
Query: 510 SSVYFQSLMTRTMMKNNLVYFRILTILIQMKDSSAYFPSLMTRTMMRNNLVYFRILTILI 331
S YF+S + + ++ YF+ + + S YF S + + ++ YF+ + +
Sbjct: 110 SREYFKSRVLQVASTSSREYFKSRVLQVASTSSREYFKSRVLQVASTSSREYFKSRVLQV 169
Query: 330 QMKDSSAYFRN 298
S YF++
Sbjct: 170 ASTSSREYFKS 180
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/111 (18%), Positives = 48/111 (43%)
Frame = -2
Query: 630 IAQILMRDSSAYFQTLIIPILMKDSSAYFQILTIPILMKDSSVYFQSLMTRTMMKNNLVY 451
+ Q+ S Y ++ ++ + S Y + + + S YF+S + + ++ Y
Sbjct: 6 VLQVASTPSRQYSKSPVLQVASTPSRQYSKSPVLQVASNSSRQYFKSPVLQVASTSSRQY 65
Query: 450 FRILTILIQMKDSSAYFPSLMTRTMMRNNLVYFRILTILIQMKDSSAYFRN 298
F++ + + S YF S + + ++ YF+ + + S YF++
Sbjct: 66 FKLPVLQVASTSSREYFKSPVLQVASTSSREYFKSPVLQVASTSSREYFKS 116
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/111 (18%), Positives = 47/111 (42%)
Frame = -2
Query: 630 IAQILMRDSSAYFQTLIIPILMKDSSAYFQILTIPILMKDSSVYFQSLMTRTMMKNNLVY 451
+ Q+ S Y ++ ++ + S YF+ + + S YF+ + + ++ Y
Sbjct: 22 VLQVASTPSRQYSKSPVLQVASNSSRQYFKSPVLQVASTSSRQYFKLPVLQVASTSSREY 81
Query: 450 FRILTILIQMKDSSAYFPSLMTRTMMRNNLVYFRILTILIQMKDSSAYFRN 298
F+ + + S YF S + + ++ YF+ + + S YF++
Sbjct: 82 FKSPVLQVASTSSREYFKSPVLQVASTSSREYFKSRVLQVASTSSREYFKS 132
>SB_28751| Best HMM Match : Cyclin_N (HMM E-Value=3.6e-05)
Length = 223
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 343 QDPEVNQVIPHHGSGHQAREVSRAILHLDQDCQDPEVNQVILHHGSGHQALEVNRAILH 519
+D + Q +P GSG++ ++ +L + + D E + L H S H+A +VN + H
Sbjct: 165 EDGRLIQTVP--GSGYKYEDLRPCLLRMSEVLLDLENMECKLRHASNHEAADVNDQLTH 221
>SB_56517| Best HMM Match : CUB (HMM E-Value=0.0011)
Length = 734
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = +1
Query: 364 VIPHHGSGHQAREVSRAILHLDQDCQDPEVNQVILH-HGSGHQALEVNRAILHQYRDCQD 540
+I H H R ++H + I+H H H AL ++H +
Sbjct: 345 LIHTHSHSHALSFTPRTVIHTHSHPHALSFTRTIIHTHSHSHHALSFTCTLIHTHSHSLA 404
Query: 541 LEVSRAILHQYRDYQGLEVSRAIPH 615
L + ++H + L +R I H
Sbjct: 405 LSFTSTLIHTHSHSHALSFTRTIIH 429
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 4/103 (3%)
Frame = +1
Query: 229 VIVTHRRTRAVL---GVIXTHRRTRXVPEVSRAILHLDQDCQDPEVNQVIPH-HGSGHQA 396
+I TH + A+ +I TH + + R ++H + I H H H A
Sbjct: 329 IIRTHSHSHALSFTHTLIHTHSHSHALSFTPRTVIHTHSHPHALSFTRTIIHTHSHSHHA 388
Query: 397 REVSRAILHLDQDCQDPEVNQVILHHGSGHQALEVNRAILHQY 525
+ ++H ++H S AL R I+H +
Sbjct: 389 LSFTCTLIHTHSHSLALSFTSTLIHTHSHSHALSFTRTIIHMH 431
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = +1
Query: 394 AREVSRAILHLDQDCQDPEVNQVILHHGSGHQALEVNRAILHQYRDCQDLEVSRAILH 567
A +R I+H + ++H S AL R ++H + L +R I+H
Sbjct: 237 ALSFTRTIIHTHSPSHTLSFTRTLIHTHSHSHALLFTRTLIHTHSHPHSLLFTRTIIH 294
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +1
Query: 457 QVILHHGSGHQALEVNRAILHQYRDCQDLEVSRAILHQYRDYQGLEVSRAIPHQDL 624
+ I+H S L R ++H + L +R ++H + L +R I H L
Sbjct: 242 RTIIHTHSPSHTLSFTRTLIHTHSHSHALLFTRTLIHTHSHPHSLLFTRTIIHTTL 297
>SB_14845| Best HMM Match : DUF983 (HMM E-Value=0.015)
Length = 254
Score = 31.5 bits (68), Expect = 0.67
Identities = 22/120 (18%), Positives = 56/120 (46%)
Frame = -2
Query: 684 ILTIPILMKDSLVCLQILIAQILMRDSSAYFQTLIIPILMKDSSAYFQILTIPILMKDSS 505
I+T+ ++MK ++ + +++ I+M + T+I+ + M + + + I+M +
Sbjct: 131 IMTLAMMMKTLIITVAMIMMTIVMT-LAMLMMTIIMTVAMIMTIIMTVAMIMIIIMTVAM 189
Query: 504 VYFQSLMTRTMMKNNLVYFRILTILIQMKDSSAYFPSLMTRTMMRNNLVYFRILTILIQM 325
+ +MT M+ + + I++ M +MT+ M ++ I+T+ + M
Sbjct: 190 IMMTIIMTVAMLMMTKILTLAMMIMMMMTKIMTLAMMMMTKIMTLAMMMMTIIMTLAMMM 249
>SB_5023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 31.1 bits (67), Expect = 0.89
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 9/121 (7%)
Frame = -2
Query: 441 LTILIQMKDSSAYFPSL-MTRTMMRNNLVYFRIL---TILIQMKDSSAYFRNXSSTTVSX 274
+T Q SS Y MT N+ Y+ ++ T Q S+ Y+ T+ +
Sbjct: 291 MTSYAQYNSSSDYHLMYHMTSYAQYNSSSYYYLMYHMTSYAQYNSSNDYYLMYHMTSYAQ 350
Query: 273 YDSQNC-----SSTTVSNYDSHXYSKMAYNLTLSHNSFHRMRNSFHYYRIYDIAXYMH*N 109
Y+S + T+ + Y+S + Y++T S+ R +S +YY +Y + Y N
Sbjct: 351 YNSSSYYHLMYHMTSYAQYNSSSDYHLMYHMT----SYARFNSSSYYYLMYHMTSYAQYN 406
Query: 108 T 106
+
Sbjct: 407 S 407
>SB_54070| Best HMM Match : Phage_integr_N (HMM E-Value=0.041)
Length = 988
Score = 30.7 bits (66), Expect = 1.2
Identities = 34/132 (25%), Positives = 58/132 (43%)
Frame = +2
Query: 269 SXLLTVVLXQFRK*AELSFIWIRIVRIRK*TKLFLIMVRVIKLGK*AELSFIWIRIVRIR 448
+ ++ + + F A SFI I IV I + +I+ + + A S I I I I
Sbjct: 24 ASIIVIAIASFSVIATASFIVIAIVSIIVISIASIIVTAIASIIVIAIASIIVIVIASII 83
Query: 449 K*TKLFFIMVRVIKLWK*TELSFINIGIVRIWK*AELSFINIGIIRVWK*AELSLIRIWA 628
FI++ + + +SFI I I I A +SFI I I + ++++R+ A
Sbjct: 84 VIAIASFIVIAIASIIVIAIVSFIVIAIASIIVIAIVSFIVIAIASI---MVIAIVRVVA 140
Query: 629 IRICKQTKLSFI 664
I T + +
Sbjct: 141 SAIATATAIVLV 152
>SB_50256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 229
Score = 29.9 bits (64), Expect = 2.0
Identities = 30/143 (20%), Positives = 63/143 (44%), Gaps = 5/143 (3%)
Frame = -2
Query: 654 SLVCLQILIAQILMRDSSAYFQTLIIPILMKDSSAYFQILTIPILMKDSSVYFQSLMTRT 475
SL C++ L Q ++ Y QT ++ ++ Y Q T ++ ++VY + RT
Sbjct: 90 SLTCIKRLPVQY----TTVYSQTCTKRPPVQYTTVYSQTCTKRPPVQHTTVYSHTCTKRT 145
Query: 474 MMKNNLVYFRILTILIQMKDSSAYFPSLMTR-----TMMRNNLVYFRILTILIQMKDSSA 310
++ +VY++ T ++ + Y + R TM+ +++ T+++ M S
Sbjct: 146 PVQYTMVYWQTCTKRPPVQYTMVYSQTCTKRPPVQYTMVNIQSSTYKMTTVMVVMTHRSV 205
Query: 309 YFRNXSSTTVSXYDSQNCSSTTV 241
R + + D + S+T V
Sbjct: 206 QTRAVAQENTTWQDEDSYSNTGV 228
>SB_18443| Best HMM Match : Phage_attach (HMM E-Value=5.3)
Length = 194
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +1
Query: 484 HQALEVNRAI-LHQYRDCQDLEVSRAILHQ-YRDYQGLEVSRA 606
+++ EV RA L YR + EV+R + YR Y+G EV+RA
Sbjct: 11 YESTEVTRAQKLRGYRSYEGTEVTRVQKSRGYRSYEGTEVTRA 53
>SB_45146| Best HMM Match : DUF504 (HMM E-Value=9.8)
Length = 273
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 484 HQALEVNRAI-LHQYRDCQDLEVSRAI-LHQYRDYQGLEVSR 603
++ EV R + L YR + EV+R L YR+Y+G E++R
Sbjct: 78 YEGTEVMRVLKLRGYRSYESTEVTRVQKLRGYRNYEGTEITR 119
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 448 EVNQVILHHG-SGHQALEVNRAI-LHQYRDCQDLEVSRAI-LHQYRDYQGLEVSRAI 609
EV +V+ G +++ EV R L YR+ + E++R L YR Y+G EV R +
Sbjct: 82 EVMRVLKLRGYRSYESTEVTRVQKLRGYRNYEGTEITRVQKLRGYRSYEGTEVPRVL 138
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +1
Query: 388 HQAREVSRAI-LHLDQDCQDPEVNQVILHHG-SGHQALEVNRAI-LHQYRDCQD-LEVSR 555
+++ EV+R + L + + EV +V+ G ++ E+ R L YR+ ++ + V +
Sbjct: 12 YESTEVTRVLKLRGYKSYESTEVTRVLKLRGYRSYEGTEITRVQKLRGYRNYEEFMRVQK 71
Query: 556 AILHQYRDYQGLEVSRAI 609
L +YR Y+G EV R +
Sbjct: 72 --LREYRSYEGTEVMRVL 87
>SB_18386| Best HMM Match : CH (HMM E-Value=2.8e-26)
Length = 589
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = -2
Query: 381 TMMRNNLVYFRILTI-LIQMK-DSSAYFRNXSSTTVSXYDSQNCSSTTVSNYDSHXYSKM 208
T++R+ L Y ++ I +I M SS+ + SS++ S +Q + + S+ +H + +
Sbjct: 447 TIIRHYLHYVVVINIFIIDMSISSSSSSSSSSSSSSSSTGAQLLTPSKPSSNHNHYHRRR 506
Query: 207 AYNLTLSHNSFHRMRNS 157
++ HN HR +++
Sbjct: 507 HHHRNYRHNHHHRHQHN 523
>SB_55679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/144 (16%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
Frame = -2
Query: 687 QILTIPILMKDSLVCLQILIAQILMRDSSAYFQTLIIPILMKDSSAYFQILTIPILMKDS 508
Q ++ P L S L+ + + + Y Q++ +P L S + + L P+ +
Sbjct: 40 QSISEPPLTTSSPSQYHPLLHPVHLSTTPYYIQSISVPPLTTSSPSQYHPLLHPVHLSTI 99
Query: 507 SVYFQSLMTRTMMKNNLVYFRILTILIQMKDSSAYFPSLMTRTMMRNNLVYFRILTILIQ 328
Y QS+ + ++ + L + + Y S+ ++ ++ + L +
Sbjct: 100 PYYIQSISVPPLTTSSPSQYHPLLHPVHLSTIPYYIQSISVPSLTTSSPSQYHPLPHPVH 159
Query: 327 MKDSSAYFRNXSSTTVSXYD-SQN 259
++ + Y ++ S ++ + SQN
Sbjct: 160 LRTTLFYIQSISEPPLTTFSPSQN 183
>SB_50280| Best HMM Match : Marek_A (HMM E-Value=1.7)
Length = 573
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = +2
Query: 317 LSFIWIRIVRIRK*TKLFLIMVRVIKLGK*AELSFIWIRIVRIRK*TKLFFIMVRVIKLW 496
L F+ ++I + L+ +MV++ L L F+ ++I + L+F+MV++ L
Sbjct: 462 LYFVMVKIRILSPLEALYFVMVKIRVLSPLEALYFVMVKIRVLSPLEALYFVMVKIRVLS 521
Query: 497 K*TELSFINI 526
L F+ +
Sbjct: 522 PLEALYFVMV 531
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = -2
Query: 597 YFQTLIIPILMKDSSAYFQILTIPILMKDSSVYFQSLMTRTMMKNNLVYFRILTILIQMK 418
YF + I IL + YF ++ I +L ++YF + R + +YF ++ I +
Sbjct: 463 YFVMVKIRILSPLEALYFVMVKIRVLSPLEALYFVMVKIRVLSPLEALYFVMVKIRVLSP 522
Query: 417 DSSAYF 400
+ YF
Sbjct: 523 LEALYF 528
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = -2
Query: 549 YFQILTIPILMKDSSVYFQSLMTRTMMKNNLVYFRILTILIQMKDSSAYFPSLMTRTMMR 370
YF ++ I IL ++YF + R + +YF ++ I + + YF + R +
Sbjct: 463 YFVMVKIRILSPLEALYFVMVKIRVLSPLEALYFVMVKIRVLSPLEALYFVMVKIRVLSP 522
Query: 369 NNLVYF 352
+YF
Sbjct: 523 LEALYF 528
>SB_27782| Best HMM Match : Borrelia_orfA (HMM E-Value=0.1)
Length = 633
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/89 (28%), Positives = 49/89 (55%)
Frame = -2
Query: 492 SLMTRTMMKNNLVYFRILTILIQMKDSSAYFPSLMTRTMMRNNLVYFRILTILIQMKDSS 313
SL+TRTM K+N +LT ++ ++S SL+TRTM + N +LT ++ ++S
Sbjct: 268 SLLTRTMRKHNT--SSLLTRTLRKYNTS----SLLTRTMRKYNT--SSLLTRTMRKHNTS 319
Query: 312 AYFRNXSSTTVSXYDSQNCSSTTVSNYDS 226
+ + T+ Y++ + + T+ Y++
Sbjct: 320 SLL----TRTMRKYNTSSLLTRTLRKYNT 344
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,812,570
Number of Sequences: 59808
Number of extensions: 238362
Number of successful extensions: 684
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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