Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_I18
         (694 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g72040.1 68414.m08327 deoxynucleoside kinase family contains ...    28   5.1  
At4g23130.2 68417.m03334 receptor-like protein kinase 6 (RLK6) i...    28   6.8  
At4g23130.1 68417.m03333 receptor-like protein kinase 6 (RLK6) i...    28   6.8  
At2g29760.1 68415.m03616 pentatricopeptide (PPR) repeat-containi...    28   6.8  
At5g57040.1 68418.m07120 lactoylglutathione lyase family protein...    27   8.9  
At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic...    27   8.9  

>At1g72040.1 68414.m08327 deoxynucleoside kinase family contains
           Pfam profile: PF01712 deoxynucleoside kinase
          Length = 580

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +1

Query: 334 QDCQDPEVNQVIPHHGSGHQAREVSRAILHLDQDCQDPEVNQVILHHGSGHQALEVNRAI 513
           QD  +   + ++P     H    VSR  LH+D     P++   + +    H    + + +
Sbjct: 435 QDLHEKHESWLLPFESGNHGVLSVSRPSLHMDNSLH-PDIKDRVFYLEGNHMHSSIQK-V 492

Query: 514 LHQYRDCQ-DLEVSRAI 561
                DC+ +++ SR I
Sbjct: 493 PALVLDCEPNIDFSRDI 509


>At4g23130.2 68417.m03334 receptor-like protein kinase 6 (RLK6)
           identical to receptor-like protein kinase 6 [Arabidopsis
           thaliana] GI:13506749; contains Pfam domain PF00069:
           Protein kinase domain
          Length = 663

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/59 (23%), Positives = 30/59 (50%)
 Frame = -2

Query: 441 LTILIQMKDSSAYFPSLMTRTMMRNNLVYFRILTILIQMKDSSAYFRNXSSTTVSXYDS 265
           L +  Q++D + Y   + T  + RN++ +  + T+L  +  ++AYF   S +     +S
Sbjct: 20  LRVSAQLQDPT-YVGHVCTNRISRNSIYFSNLQTLLTSLSSNNAYFSLGSHSLTKGQNS 77


>At4g23130.1 68417.m03333 receptor-like protein kinase 6 (RLK6)
           identical to receptor-like protein kinase 6 [Arabidopsis
           thaliana] GI:13506749; contains Pfam domain PF00069:
           Protein kinase domain
          Length = 659

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/59 (23%), Positives = 30/59 (50%)
 Frame = -2

Query: 441 LTILIQMKDSSAYFPSLMTRTMMRNNLVYFRILTILIQMKDSSAYFRNXSSTTVSXYDS 265
           L +  Q++D + Y   + T  + RN++ +  + T+L  +  ++AYF   S +     +S
Sbjct: 20  LRVSAQLQDPT-YVGHVCTNRISRNSIYFSNLQTLLTSLSSNNAYFSLGSHSLTKGQNS 77


>At2g29760.1 68415.m03616 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 738

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 451 VNQVILHHGSGHQALEVNRAILHQYRDCQDLEVSRAILH 567
           ++  I  HG       V  A++H Y  C DLE SR + +
Sbjct: 387 IHSYIKKHGI-RMNFHVTSALIHMYSKCGDLEKSREVFN 424


>At5g57040.1 68418.m07120 lactoylglutathione lyase family protein /
           glyoxalase I family protein contains Pfam PF00903:
           glyoxalase family protein
          Length = 197

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 532 CQDLEVSRAILHQYRDYQGLEVSRAIPHQDLGYQ 633
           C++LE S   L  Y++  GLE++ A PH  L Y+
Sbjct: 86  CENLERS---LEFYQNILGLEINEARPHDKLPYR 116


>At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical
           to low affinity calcium antiporter CAX2 (GI:1488267)
           [Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA)
           Family member PMID:11500563
          Length = 441

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 36  TVV*RXIYHQNGQQNYFSSCLLVLCF 113
           TV+    + Q G  NYF   +L+LC+
Sbjct: 398 TVIVVAFFLQEGSSNYFKGLMLILCY 423


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,617,396
Number of Sequences: 28952
Number of extensions: 156867
Number of successful extensions: 388
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)