Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_I16
         (739 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    25   0.56 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.98 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   1.3  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   5.2  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   5.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   5.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   6.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.1  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +2

Query: 83  TMDAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQ-VEEDLI 259
           TMD   K  +  +++K + MD+ D   +  R  N    ++NE +  L  KL + +  D  
Sbjct: 503 TMDRTDKMSRIDRMDKIDRMDRMDRTNRMDR-MNRMNRQMNEYMMALSMKLQKFINNDYN 561

Query: 260 LNK 268
            N+
Sbjct: 562 FNE 564



 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/42 (21%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +2

Query: 83  TMDAIKKKMQAMKLEKDNAMDKADTCEQQARDANL-RAEKVN 205
           TMD + +  +  ++++ + MD+ DT ++  + + + R +K++
Sbjct: 479 TMDTMDRMDRMDRMDRMDRMDRMDTMDRTDKMSRIDRMDKID 520


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -3

Query: 308 PSLQGPCWPAPVCSCSGSGLPPPGRASSGVRGLPRLPSQHG 186
           PS   P  P P  S + SG+PP       +  +P +PS  G
Sbjct: 411 PSAGAPMPPIPNMS-NMSGMPPLPNMPGSMPTMPTMPSMAG 450


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +2

Query: 227 KKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAEVAALNRKVQQI*EDLEKSEERS 403
           K L  V +   +NK +   + K+   K+++ TAT  +    +RK Q      +KSEE++
Sbjct: 766 KALLPVIKPANVNKEQSPNSTKETTPKKERKTATTTQPVISSRKEQ------KKSEEKN 818


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 634 DTVFGDFEFVFNEGQFSRNLVGFSVSVLGEETGLFQLVGE 515
           + +   F  V   G F  N+V    S+  +E  + +LV E
Sbjct: 64  ECILKQFNIVDESGNFKENIVQELTSIYLDENVIKKLVAE 103


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 634 DTVFGDFEFVFNEGQFSRNLVGFSVSVLGEETGLFQLVGE 515
           + +   F  V   G F  N+V    S+  +E  + +LV E
Sbjct: 64  ECILKQFNIVDESGNFKENIVQELTSIYLDENVIKKLVAE 103


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 494 DEERMDQLTNQLKEARLLAEDADGKSD 574
           D  R+D + +  ++ARLL E +  ++D
Sbjct: 218 DGFRIDAINHMFEDARLLDEPSANRTD 244


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 545 GDGPLSIGW*AGPYAPRPAVP 483
           GD PL+I W     +P P  P
Sbjct: 637 GDPPLTISWLKDGQSPFPLPP 657


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
 Frame = -2

Query: 459 RLFSSA-DCWASSSFCWAV 406
           R F+SA D W+    CW V
Sbjct: 813 RKFTSASDVWSMGIVCWEV 831


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,822
Number of Sequences: 438
Number of extensions: 4073
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)