Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_I14
         (918 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   4.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   7.7  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 244 KYF*VNVVCMNMNLI 288
           KY+ +NV C+N++++
Sbjct: 54  KYYWLNVCCLNLSIV 68


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 88   HDAIRYSLVYFLTLYRDVHYQHCTFCLSI 2
            H+ I   L YF+ L   V  QHC   +S+
Sbjct: 1236 HNVIGQFLGYFIGLITFVMSQHCVELVSM 1264


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +2

Query: 563 IMANYFRWKKGKRDEDVFYSEKPRSRSLDPRSLEISGIRLV 685
           +  NY+R K+ +RDE   Y +      L P S E   I L+
Sbjct: 397 VTVNYYRHKQKRRDERERYFKGLDEEKL-PESGENIEINLI 436


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,715
Number of Sequences: 336
Number of extensions: 4144
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25651384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)