Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_I14
         (918 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep...    29   6.2  
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue...    29   6.2  

>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical protein
            ZK287.4 protein.
          Length = 1208

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 16/66 (24%), Positives = 29/66 (43%)
 Frame = +3

Query: 279  ESYMLR*FRIVKTRHAIHYAYLGPVTETNLLLWISVACVVTCITKRLVTATLSQQPKKCF 458
            + Y+ R F   + R  +H+ Y G     N    ++  C+ TC+   +  ++L+  P    
Sbjct: 987  DQYLSRYFFSPEYRQCLHFIYSGEGGNQNNFDSLT-DCLETCVANGIKFSSLANSPMSAV 1045

Query: 459  HDPTPT 476
              P PT
Sbjct: 1046 PPPPPT 1051


>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
           homolog protein.
          Length = 1846

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 676 PPCSTTLSASAATEGIGSAT 735
           P CS+T S +AATE +G+ T
Sbjct: 26  PSCSSTTSTTAATEALGTTT 45


>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
           formation protein 2 protein.
          Length = 1843

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 676 PPCSTTLSASAATEGIGSAT 735
           P CS+T S +AATE +G+ T
Sbjct: 23  PSCSSTTSTTAATEALGTTT 42


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,439,197
Number of Sequences: 27780
Number of extensions: 387344
Number of successful extensions: 908
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)