Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_I13
(813 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius... 101 3e-20
UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal ... 85 2e-15
UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus... 81 4e-14
UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126; Euka... 58 3e-07
UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037... 54 6e-06
UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;... 52 1e-05
UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular o... 50 7e-05
UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10; Fungi/... 50 9e-05
UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostel... 48 4e-04
UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117... 48 4e-04
UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|R... 47 6e-04
UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6; Fungi/M... 47 6e-04
UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lambl... 43 0.011
UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2; Crypto... 40 0.075
UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n... 39 0.13
UniRef50_Q49549 Cluster: P3; n=1; Mycoplasma hyorhinis|Rep: P3 -... 38 0.23
UniRef50_Q12IA3 Cluster: Putative uncharacterized protein precur... 33 6.5
UniRef50_A3ZU56 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
>UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius
melpomene|Rep: Ribosomal protein L23a - Heliconius
melpomene
Length = 221
Score = 101 bits (241), Expect = 3e-20
Identities = 49/71 (69%), Positives = 52/71 (73%)
Frame = +1
Query: 595 SKLKIAXXXXXXXXXXXXXXXXPVTKALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEP 774
+KLKIA PV KALK Q+KVVKGEHGKRVRKIR SVHFRRPKTFEP
Sbjct: 129 AKLKIAPKPKKTGIKGQKKVVKPVVKALKIQKKVVKGEHGKRVRKIRTSVHFRRPKTFEP 188
Query: 775 PRHPKYPRKSL 807
PR+PKYPRKSL
Sbjct: 189 PRNPKYPRKSL 199
>UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal
protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to ribosomal protein L23Ae - Nasonia vitripennis
Length = 247
Score = 85.4 bits (202), Expect = 2e-15
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +1
Query: 661 PVTKALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKSL 807
PV KALKAQ+K++KG G RVRKIR SVHF RPKTF PPR+PKYPRKS+
Sbjct: 108 PVQKALKAQKKILKGVQGSRVRKIRTSVHFHRPKTFRPPRNPKYPRKSV 156
>UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus
cervinus|Rep: Ribosomal protein L23Ae - Dascillus
cervinus
Length = 212
Score = 80.6 bits (190), Expect = 4e-14
Identities = 35/49 (71%), Positives = 39/49 (79%)
Frame = +1
Query: 661 PVTKALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKSL 807
PV KAL Q+KV+KG G R RKIR SVHF RPKTF PPR+PKYPRKS+
Sbjct: 141 PVQKALNVQKKVIKGPFGTRARKIRNSVHFHRPKTFRPPRNPKYPRKSV 189
>UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126;
Eukaryota|Rep: 60S ribosomal protein L23a - Homo sapiens
(Human)
Length = 156
Score = 58.0 bits (134), Expect = 3e-07
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKS 804
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKS 64
>UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037;
n=99; Fungi/Metazoa group|Rep: Uncharacterized protein
ENSP00000339037 - Homo sapiens (Human)
Length = 156
Score = 53.6 bits (123), Expect = 6e-06
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKS 804
KALKA++ V+KG H + +KI S FRRPKT + R PKYP KS
Sbjct: 20 KALKAKKAVLKGVHNHKKKKIHTSPTFRRPKTLQLRRQPKYPWKS 64
>UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 109
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +1
Query: 673 ALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKSL 807
ALK ++ ++G H R RKI V FRRPKT++ R PKY RKS+
Sbjct: 43 ALKTKKAALRGTHATRKRKIHTKVTFRRPKTYKAARVPKYTRKSI 87
>UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular
organisms|Rep: Ribosomal protein L23a - Taenia asiatica
(Asian tapeworm)
Length = 204
Score = 50.0 bits (114), Expect = 7e-05
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +1
Query: 664 VTKALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPK 789
V +ALKAQ+ + G H K +K+ ++ FRRPKT+ PPR PK
Sbjct: 66 VARALKAQKAINIGAHTKGKKKVMKNIRFRRPKTYRPPRCPK 107
>UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 142
Score = 49.6 bits (113), Expect = 9e-05
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +1
Query: 661 PVTKALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKSL 807
P KA A++ VVKG +GK+ K+R S FR PKT + R PKY K++
Sbjct: 3 PSAKATAAKKAVVKGTNGKKALKVRTSATFRLPKTLKLARAPKYASKAV 51
>UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L23a -
Dictyostelium discoideum AX4
Length = 169
Score = 47.6 bits (108), Expect = 4e-04
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKSL 807
KA A V KG K RK+R SV FRRP T P+ P YPR+S+
Sbjct: 33 KAKAAASAVKKGVSNKSTRKVRTSVIFRRPVTLNNPKKPAYPRRSV 78
>UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117;
n=5; Eutheria|Rep: Uncharacterized protein
ENSP00000332117 - Homo sapiens (Human)
Length = 156
Score = 47.6 bits (108), Expect = 4e-04
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKS 804
KALKA++ +KG H +K R S+ F+RPKT R P+YP KS
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKS 64
>UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|Rep:
Ribosomal protein L23 - Spinacia oleracea (Spinach)
Length = 155
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +1
Query: 661 PVTKALKAQRKVVKGEH---GKRVRKIRXSVHFRRPKTFEPPRHPKYPRKS 804
P +ALKA + V G + K +KIR V F RPKTF+ R+PKYPR S
Sbjct: 13 PKAQALKAAKAVKSGSNILKKKASKKIRTKVTFHRPKTFKKERNPKYPRIS 63
>UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Chaetomium globosum (Soil fungus)
Length = 156
Score = 46.8 bits (106), Expect = 6e-04
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKSL 807
+A KA + +KG H + K+R S F RPKT R PKYPRKS+
Sbjct: 19 QAKKAAQAALKGVHAHKRTKVRLSTTFHRPKTLVLSRAPKYPRKSV 64
>UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_12155_12580 - Giardia lamblia
ATCC 50803
Length = 141
Score = 42.7 bits (96), Expect = 0.011
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRV--RKIRXSVHFRRPKTFEPPRHPKYPRKSL 807
+ALKAQ+ ++ HG RV +KIR +VHF RPKT + P YPR +
Sbjct: 6 QALKAQKAIL---HGTRVEAKKIRTNVHFFRPKTLVHKKAPLYPRNPI 50
>UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L23A -
Cryptosporidium parvum Iowa II
Length = 156
Score = 39.9 bits (89), Expect = 0.075
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 667 TKA-LKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKSL 807
TKA K + VK KIR V F RPKT + R+PKY RKS+
Sbjct: 18 TKANAKKTAQAVKNSKRSSTTKIRTRVQFYRPKTLKLQRNPKYERKSI 65
>UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n=3;
Plasmodium|Rep: 60S ribosomal protein L23a, putative -
Plasmodium vivax
Length = 195
Score = 39.1 bits (87), Expect = 0.13
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 685 QRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPR 798
Q K E K+ +KI S+ F+RPKT + P++PK P+
Sbjct: 63 QVKKAAAEESKKKKKITTSIKFKRPKTLKLPKNPKCPK 100
>UniRef50_Q49549 Cluster: P3; n=1; Mycoplasma hyorhinis|Rep: P3 -
Mycoplasma hyorhinis
Length = 1187
Score = 38.3 bits (85), Expect = 0.23
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 162 TCVSQNTGTCPESSCACPETSCACPE 239
+C ++ G C E SCACP T+CAC E
Sbjct: 380 SCAQEHCG-CQEESCACPNTTCACTE 404
Score = 38.3 bits (85), Expect = 0.23
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 162 TCVSQNTGTCPESSCACPETSCACPE 239
+C ++ G C E SCACP T+CAC E
Sbjct: 836 SCAQEHCG-CQEESCACPNTTCACTE 860
Score = 34.3 bits (75), Expect = 3.7
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 162 TCVSQN-TGTCPESSCACPETSCACPET 242
TC Q T +C + C C E SCACP T
Sbjct: 371 TCGCQEATCSCAQEHCGCQEESCACPNT 398
Score = 34.3 bits (75), Expect = 3.7
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 162 TCVSQN-TGTCPESSCACPETSCACPET 242
TC Q T +C + C C E SCACP T
Sbjct: 827 TCGCQEATCSCAQEHCGCQEESCACPNT 854
>UniRef50_Q12IA3 Cluster: Putative uncharacterized protein
precursor; n=1; Shewanella denitrificans OS217|Rep:
Putative uncharacterized protein precursor - Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Length = 149
Score = 33.5 bits (73), Expect = 6.5
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 171 SQNTGTCPESSCACPETSC 227
SQN+G C E+SC CP +SC
Sbjct: 87 SQNSGDCCENSCRCPVSSC 105
>UniRef50_A3ZU56 Cluster: Putative uncharacterized protein; n=1;
Blastopirellula marina DSM 3645|Rep: Putative
uncharacterized protein - Blastopirellula marina DSM
3645
Length = 155
Score = 33.1 bits (72), Expect = 8.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 162 TCVSQNTGTCPESSCACPETSCACPE 239
TC + PE +C PE SCA PE
Sbjct: 94 TCCAPEPACAPEPTCCAPEPSCAAPE 119
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,257,245
Number of Sequences: 1657284
Number of extensions: 5220471
Number of successful extensions: 16399
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 15493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16361
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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