Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_I13
(813 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 58 4e-08
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 58 4e-08
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 58 4e-08
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 58 4e-08
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 58 4e-08
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 58 4e-08
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 58 4e-08
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 54 6e-07
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 54 6e-07
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 54 6e-07
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 54 6e-07
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 48 5e-05
BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibilit... 36 0.17
BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibilit... 36 0.17
BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein. 36 0.17
AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibilit... 36 0.17
AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibilit... 36 0.17
AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibilit... 36 0.17
AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibilit... 36 0.17
AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibilit... 36 0.17
AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibilit... 36 0.17
AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibili... 36 0.17
BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7 pro... 33 0.93
BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein. 32 2.8
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 58.0 bits (134), Expect = 4e-08
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKS 804
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKS 64
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 58.0 bits (134), Expect = 4e-08
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKS 804
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKS 64
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 58.0 bits (134), Expect = 4e-08
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKS 804
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKS 64
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 58.0 bits (134), Expect = 4e-08
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKS 804
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKS 55
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 58.0 bits (134), Expect = 4e-08
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKS 804
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKS 64
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 58.0 bits (134), Expect = 4e-08
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKS 804
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKS 64
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 58.0 bits (134), Expect = 4e-08
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKS 804
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKS 64
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 54.0 bits (124), Expect = 6e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKS 804
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKT 64
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 54.0 bits (124), Expect = 6e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKS 804
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKT 64
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 54.0 bits (124), Expect = 6e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKS 804
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKT 64
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 54.0 bits (124), Expect = 6e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKS 804
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKT 64
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 47.6 bits (108), Expect = 5e-05
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +1
Query: 670 KALKAQRKVVKGEHGKRVRKIRXSVHFRRPKTFEPPRHPKYPRKS 804
KALKA++ +KG H +K R S+ F+RPKT R P+YP KS
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKS 64
>BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibility
complex class I F protein.
Length = 123
Score = 35.9 bits (79), Expect = 0.17
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = -2
Query: 800 FLGYLGCLGGSNVLGLRKCTXLRIFRTLFPCSPFTTFL*ALSALVTGF 657
F GYLGCL +VLG RK + I L+ + F T AL +L GF
Sbjct: 50 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 97
>BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibility
complex class I F protein.
Length = 442
Score = 35.9 bits (79), Expect = 0.17
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = -2
Query: 800 FLGYLGCLGGSNVLGLRKCTXLRIFRTLFPCSPFTTFL*ALSALVTGF 657
F GYLGCL +VLG RK + I L+ + F T AL +L GF
Sbjct: 369 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 416
>BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein.
Length = 460
Score = 35.9 bits (79), Expect = 0.17
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = -2
Query: 800 FLGYLGCLGGSNVLGLRKCTXLRIFRTLFPCSPFTTFL*ALSALVTGF 657
F GYLGCL +VLG RK + I L+ + F T AL +L GF
Sbjct: 387 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 434
>AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 35.9 bits (79), Expect = 0.17
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = -2
Query: 800 FLGYLGCLGGSNVLGLRKCTXLRIFRTLFPCSPFTTFL*ALSALVTGF 657
F GYLGCL +VLG RK + I L+ + F T AL +L GF
Sbjct: 50 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 97
>AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 35.9 bits (79), Expect = 0.17
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = -2
Query: 800 FLGYLGCLGGSNVLGLRKCTXLRIFRTLFPCSPFTTFL*ALSALVTGF 657
F GYLGCL +VLG RK + I L+ + F T AL +L GF
Sbjct: 369 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 416
>AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 35.9 bits (79), Expect = 0.17
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = -2
Query: 800 FLGYLGCLGGSNVLGLRKCTXLRIFRTLFPCSPFTTFL*ALSALVTGF 657
F GYLGCL +VLG RK + I L+ + F T AL +L GF
Sbjct: 50 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 97
>AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 35.9 bits (79), Expect = 0.17
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = -2
Query: 800 FLGYLGCLGGSNVLGLRKCTXLRIFRTLFPCSPFTTFL*ALSALVTGF 657
F GYLGCL +VLG RK + I L+ + F T AL +L GF
Sbjct: 369 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 416
>AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 35.9 bits (79), Expect = 0.17
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = -2
Query: 800 FLGYLGCLGGSNVLGLRKCTXLRIFRTLFPCSPFTTFL*ALSALVTGF 657
F GYLGCL +VLG RK + I L+ + F T AL +L GF
Sbjct: 50 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 97
>AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 35.9 bits (79), Expect = 0.17
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = -2
Query: 800 FLGYLGCLGGSNVLGLRKCTXLRIFRTLFPCSPFTTFL*ALSALVTGF 657
F GYLGCL +VLG RK + I L+ + F T AL +L GF
Sbjct: 369 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 416
>AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 35.9 bits (79), Expect = 0.17
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = -2
Query: 800 FLGYLGCLGGSNVLGLRKCTXLRIFRTLFPCSPFTTFL*ALSALVTGF 657
F GYLGCL +VLG RK + I L+ + F T AL +L GF
Sbjct: 369 FQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 416
>BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7
protein protein.
Length = 121
Score = 33.5 bits (73), Expect = 0.93
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 739 SVHFRRPKTFEPPRHPKYPRKS 804
S+ FRRPKT R P+YPRKS
Sbjct: 2 SLTFRRPKTLRLRRQPRYPRKS 23
>BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein.
Length = 121
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 739 SVHFRRPKTFEPPRHPKYPRKS 804
S+ FRRPKT R P+YP+KS
Sbjct: 2 SLTFRRPKTLRLRRQPRYPQKS 23
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,879,787
Number of Sequences: 237096
Number of extensions: 901324
Number of successful extensions: 2315
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2311
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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