Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_I12
         (596 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   4.3  
EF588577-1|ABQ96772.1|  177|Anopheles gambiae transposase protein.     23   5.7  
EF588564-1|ABQ96762.1|  176|Anopheles gambiae transposase protein.     23   5.7  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   9.9  

>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 275 QSKRSIR*ASHSLTFKRKQRTESLFIEFF 361
           +SKRS+R  + + T KR  R  + F+E F
Sbjct: 302 RSKRSVRRKAGTGTGKRSDRVRNPFLERF 330


>EF588577-1|ABQ96772.1|  177|Anopheles gambiae transposase protein.
          Length = 177

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 144 ALIPIVYSKNTEKRADSCKTA 206
           AL+P VY++  EK  D   TA
Sbjct: 153 ALLPSVYNQEFEKAKDKLSTA 173


>EF588564-1|ABQ96762.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 144 ALIPIVYSKNTEKRADSCKTA 206
           AL+P VY++  EK  D   TA
Sbjct: 152 ALLPSVYNQEFEKAKDKLSTA 172


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 189 QPVSLCS*NTRSE*EQPNTDGLLSFSTVTVLNAP 88
           QP  L S +++ +  QP  D +L    V  L+ P
Sbjct: 453 QPQQLSSSSSQGQGNQPTVDSILLSEVVPPLSLP 486


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,601
Number of Sequences: 2352
Number of extensions: 11546
Number of successful extensions: 237
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)