Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_I12
(596 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 4.0
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 4.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.3
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 6.9
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 6.9
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 6.9
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 6.9
DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein. 21 6.9
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 6.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 6.9
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 9.2
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 9.2
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 9.2
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 9.2
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 9.2
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 9.2
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 9.2
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 9.2
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 10 GITFYSINITLYSSVCT*FLIHFY 81
G+T Y ++I+ S V F + FY
Sbjct: 39 GVTMYVLSISSVSEVLMDFTLDFY 62
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.0
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 593 LSDNTLFMHINQLYRNTNYNTVLK 522
LS+ T+ H N Y N NYN K
Sbjct: 85 LSNKTI--HNNNNYNNNNYNNYKK 106
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 586 TILYLCTSINYIEIQITTQS*RRHL 512
TI Y C Y+++ T Q RR L
Sbjct: 171 TITYQCCPEPYVDVTFTIQIRRRTL 195
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 586 TILYLCTSINYIEIQITTQS*RRHL 512
TI Y C Y+++ T Q RR L
Sbjct: 171 TITYQCCPEPYVDVTFTIQIRRRTL 195
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 586 TILYLCTSINYIEIQITTQS*RRHL 512
TI Y C Y+++ T Q RR L
Sbjct: 171 TITYQCCPEPYVDVTFTIQIRRRTL 195
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 586 TILYLCTSINYIEIQITTQS*RRHL 512
TI Y C Y+++ T Q RR L
Sbjct: 171 TITYQCCPEPYVDVTFTIQIRRRTL 195
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 586 TILYLCTSINYIEIQITTQS*RRHL 512
TI Y C Y+++ T Q RR L
Sbjct: 171 TITYQCCPEPYVDVTFTIQIRRRTL 195
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 586 TILYLCTSINYIEIQITTQS*RRHL 512
TI Y C Y+++ T Q RR L
Sbjct: 171 TITYQCCPEPYVDVTFTIQIRRRTL 195
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 586 TILYLCTSINYIEIQITTQS*RRHL 512
TI Y C Y+++ T Q RR L
Sbjct: 239 TITYQCCPEPYVDVTFTIQIRRRTL 263
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 586 TILYLCTSINYIEIQITTQS*RRHL 512
TI Y C Y+++ T Q RR L
Sbjct: 239 TITYQCCPEPYVDVTFTIQIRRRTL 263
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.4 bits (43), Expect = 6.9
Identities = 5/14 (35%), Positives = 12/14 (85%)
Frame = -3
Query: 579 FIYAHQSIISKYKL 538
++Y HQ ++++Y+L
Sbjct: 276 YLYLHQQLLARYEL 289
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 12 HYLLLNQYYL 41
H LLLN+YYL
Sbjct: 263 HKLLLNRYYL 272
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 12 HYLLLNQYYL 41
H LLLN+YYL
Sbjct: 263 HKLLLNRYYL 272
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 10 GITFYSINITLYSSVCT*FLIHFY 81
G+T Y ++I+ S V F + FY
Sbjct: 39 GVTMYVLSISSLSEVKMDFTLDFY 62
>DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein.
Length = 150
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 133 CIRLLSFRSCILRTQRN 183
C LSF+ C+L+ RN
Sbjct: 132 CDVALSFKLCMLKAMRN 148
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 6.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 593 LSDNTLFMHINQLYRNTNYN 534
LS+ T+ H N Y N NYN
Sbjct: 85 LSNKTI--HNNNNYNNNNYN 102
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 6.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 593 LSDNTLFMHINQLYRNTNYN 534
LS+ T+ H N Y N NYN
Sbjct: 318 LSNKTI--HNNNNYNNNNYN 335
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 593 LSDNTLFMHINQLYRNTNYNTVLK 522
LS+N + + N N NYN K
Sbjct: 85 LSNNYNYSNYNNYNNNNNYNNYKK 108
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 593 LSDNTLFMHINQLYRNTNYNTVLK 522
LS+N + + N N NYN K
Sbjct: 85 LSNNYNYSNYNNYNNNNNYNNYKK 108
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 593 LSDNTLFMHINQLYRNTNYNTVLK 522
LS+N + + N N NYN K
Sbjct: 85 LSNNYNYSNYNNYNNNNNYNNYKK 108
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 593 LSDNTLFMHINQLYRNTNYNTVLK 522
LS+N + + N N NYN K
Sbjct: 85 LSNNYNYSNYNNYNNNNNYNNYKK 108
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 593 LSDNTLFMHINQLYRNTNYNTVLK 522
LS+N + + N N NYN K
Sbjct: 85 LSNNYNYSNYNNYNNNNNYNNYKK 108
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 593 LSDNTLFMHINQLYRNTNYNTVLK 522
LS+N + + N N NYN K
Sbjct: 85 LSNNYNYSNYNNYNNNNNYNNYKK 108
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 593 LSDNTLFMHINQLYRNTNYNTVLK 522
LS+N + + N N NYN K
Sbjct: 85 LSNNYNYSNYNNYNNNNNYNNYKK 108
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 593 LSDNTLFMHINQLYRNTNYNTVLK 522
LS+N + + N N NYN K
Sbjct: 85 LSNNYNYSNYNNYNNNNNYNNYKK 108
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,324
Number of Sequences: 438
Number of extensions: 3178
Number of successful extensions: 31
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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