Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_I07
(799 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_05_0016 - 18410889-18411104,18411326-18411381,18412883-184130... 82 6e-16
04_01_0229 - 2897484-2900402 34 0.11
05_02_0115 - 6758540-6758771,6759417-6759524,6759670-6759840,675... 32 0.46
11_08_0001 + 27467447-27467707,27467831-27468433 32 0.61
02_05_1092 - 34049640-34049934,34050013-34050147,34050229-340503... 31 0.80
04_04_1283 - 32373774-32373821,32373834-32373958,32375717-32376227 31 1.1
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 31 1.4
01_01_0489 + 3608720-3608811,3609326-3609431,3609518-3609581,360... 31 1.4
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 30 1.9
01_05_0039 - 17486716-17487855 30 1.9
06_03_1302 - 29163974-29166907 29 3.2
12_02_0371 - 18187169-18188386 29 4.3
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 29 4.3
10_08_1005 - 22179407-22180122,22180210-22180653,22180737-221808... 29 4.3
06_01_0047 - 429838-429960,430413-430508,430589-430596,431088-43... 29 4.3
02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157... 29 4.3
12_01_0010 + 74517-74529,76294-76394,76495-76526,76652-76662,804... 28 7.5
10_02_0114 + 5431578-5431724,5432753-5432797,5433572-5433691,543... 28 7.5
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 28 7.5
04_01_0252 - 3329712-3331061 28 7.5
11_01_0218 - 1704459-1704629,1704895-1705119,1705120-1705277,170... 28 9.9
06_01_1076 - 8778210-8778734 28 9.9
03_02_0643 - 10090720-10091007,10091121-10091228,10091314-100914... 28 9.9
02_04_0372 + 22448908-22449038,22450130-22450197,22451812-22452029 28 9.9
>11_05_0016 -
18410889-18411104,18411326-18411381,18412883-18413009,
18413113-18413307
Length = 197
Score = 81.8 bits (193), Expect = 6e-16
Identities = 34/67 (50%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Frame = +3
Query: 600 DVDIVSYESELQMPEIMRLIQKDLSEPYSIYTYRYFIHNWPKLCFLA--RHEGKCIGAIV 773
++ VSY E +P +M L+ ++LSEPYSI+TYRYF++ WP+L FLA +GKC+G +V
Sbjct: 20 EIAYVSYGGEHHLPLVMSLVDEELSEPYSIFTYRYFVYLWPQLTFLAFDPKDGKCVGTVV 79
Query: 774 CKLXIHR 794
CK+ HR
Sbjct: 80 CKMGEHR 86
>04_01_0229 - 2897484-2900402
Length = 972
Score = 34.3 bits (75), Expect = 0.11
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Frame = +3
Query: 336 INNINSNLTNGTSDHSNGSSEVLSEKTDGQGETV---NK--VTNDVNSVQ--HNDTSNNF 494
I N +LTN +SDH G+ L++ + G GE + NK N +N V+ D ++N
Sbjct: 499 IGTSNKDLTNKSSDHVEGNESDLNDNSSGHGEGIGSGNKHLSNNFLNHVEGIGFDLNDNS 558
Query: 495 EGKKTTMPSINRCLLDMALEKLE-INTNNEDLLPRDD 602
+ + S + +++ +L+++E I+ + D RD+
Sbjct: 559 SDHEEGIGSGKKDMMNKSLDRVEGISFDLRDNYSRDE 595
>05_02_0115 - 6758540-6758771,6759417-6759524,6759670-6759840,
6759967-6760077,6760562-6760663,6761139-6761366,
6761568-6761696,6761753-6761869,6761955-6762301,
6762377-6762931,6763104-6763182,6763429-6763595,
6763857-6764075,6764956-6765139,6765175-6765371,
6765717-6766035,6766379-6766538,6767642-6767794,
6767911-6768013
Length = 1226
Score = 32.3 bits (70), Expect = 0.46
Identities = 21/104 (20%), Positives = 50/104 (48%)
Frame = +3
Query: 231 NTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 410
NT+ + K++ Q DE I S+++L+ + +NS+ +G + + + +
Sbjct: 1129 NTQEHEEPLKNIGQDDET-ISSKDNLH---------HGLNSSNNSGGAGETELLDDFIEP 1178
Query: 411 KTDGQGETVNKVTNDVNSVQHNDTSNNFEGKKTTMPSINRCLLD 542
+ D T +V +D+N + D ++F +K + ++ ++D
Sbjct: 1179 ELDNVENTEQRVIDDINITESGDMESSFADQKPGLKRRHKLVID 1222
>11_08_0001 + 27467447-27467707,27467831-27468433
Length = 287
Score = 31.9 bits (69), Expect = 0.61
Identities = 27/97 (27%), Positives = 46/97 (47%)
Frame = +3
Query: 345 INSNLTNGTSDHSNGSSEVLSEKTDGQGETVNKVTNDVNSVQHNDTSNNFEGKKTTMPSI 524
++ NL SD GS+E++ K + TV+ D+N + TS + K+ + S
Sbjct: 129 LDDNLVPKVSDF--GSAELVL-KIKNERRTVSA---DLNYIDPTYTSTGYFSDKSDVYSF 182
Query: 525 NRCLLDMALEKLEINTNNEDLLPRDDVDIVSYESELQ 635
LL++ K I NN+ LL V+ + Y+ + Q
Sbjct: 183 GLVLLELITRKKSIYANNKSLL----VEFIKYKKDQQ 215
>02_05_1092 -
34049640-34049934,34050013-34050147,34050229-34050305,
34050541-34050624,34050699-34050849,34050944-34051060,
34051162-34051219,34051412-34051502,34051601-34051648,
34051724-34051792,34051881-34051904,34052125-34052233,
34052338-34052375,34052524-34052672,34052765-34052780
Length = 486
Score = 31.5 bits (68), Expect = 0.80
Identities = 21/97 (21%), Positives = 46/97 (47%)
Frame = +3
Query: 186 KVADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTN 365
KV + ++ + + N +N++K + +++ + C ++ H + H+ I S + +
Sbjct: 128 KVKGSELEKMSKTSNNQQNRAKILEKKTRSSK-CAPTKAHQMAAGSIREHLVEIQSAVPS 186
Query: 366 GTSDHSNGSSEVLSEKTDGQGETVNKVTNDVNSVQHN 476
TS H + T+ + +VT D N+VQH+
Sbjct: 187 YTSCHEPPQDKTNKRCTNRRKSESCEVTMDTNTVQHS 223
>04_04_1283 - 32373774-32373821,32373834-32373958,32375717-32376227
Length = 227
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 669 LSEPYSIYTYRYFIHNWPKLCFLAR-HEGKCIGAIVCKL 782
L E Y + Y Y + +WP+L F+A + G+ +G ++ K+
Sbjct: 23 LPENYQMKYYLYHMLSWPQLLFVAEDYGGRIVGYVLAKM 61
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/154 (17%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Frame = +3
Query: 189 VADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNG 368
V+D +++I+ Q + K T++ ++D + +++ H + ++ + + +N L +
Sbjct: 4606 VSDPELRSIESFQCGENDGMKLTRNYLESDCMILETNVHEESSTSSDVEVEAVN--LRDD 4663
Query: 369 TSDHSNGSSEVLSEKTDGQGETVNKVT-NDVNSVQHNDTSNNFEGKKTTMPSINRCLL-- 539
T ++ L ++ E ++ V N + + + P +L
Sbjct: 4664 TFHIRESTAAKLDDENKTNTENISVVMPNKLQKDVKLSLGKKIVSEISQKPINEDVVLSS 4723
Query: 540 DMALE---KLEINTNNEDLLPRDDVDIVSYESEL 632
+ A+E K+E++ N E + R+D+++V++ E+
Sbjct: 4724 EQAMEGDKKIELDANIEGNIVRNDIEMVTHNCEI 4757
>01_01_0489 +
3608720-3608811,3609326-3609431,3609518-3609581,
3609905-3609965,3610017-3610144,3610236-3610385,
3610537-3610791,3611060-3611265,3611469-3611696,
3612161-3612259
Length = 462
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/98 (20%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Frame = +3
Query: 231 NTKNKSKKTKDLSQADELCIKSQEHLNETLANTL---HIN-NINSNLTNGTSDHSNGSSE 398
+ +N++++ +D LC++ + ETL N + N +N++++ G S ++G S
Sbjct: 96 DNQNETQRPPSEWSSDVLCLRFAYRMEETLINMFLSGYSNAEVNADISLGDSQINDGDSS 155
Query: 399 VLSEKTDGQGETVNKVTNDVNSVQHNDTSNNFEGKKTT 512
+E G + N ++ ++ H T + + + +T
Sbjct: 156 ETAENKPGNFASENAPSSPCDASLH-QTEDELQNENST 192
>03_02_0910 +
12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 30.3 bits (65), Expect = 1.9
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Frame = +3
Query: 360 TNGTSDHSNGSSEVLSEKTDGQGETVNKVTNDVNSVQHNDTSNNFEGKKTTM-PSINRCL 536
+NGTS + NG + + +T NK D N + +TS EG + P+ N
Sbjct: 525 SNGTSSNDNGHAMSVENNASEVADTDNK--EDCN-LDGQNTSGRIEGPSEEIPPNANGMD 581
Query: 537 LDMALEKL----EINTNNEDLLPRDDVDIVSYESELQMPE 644
+D E+ I N+ED R DI E L +PE
Sbjct: 582 IDSDREETYNVEGIAENSEDCRVRGGGDI-DTECNLSLPE 620
>01_05_0039 - 17486716-17487855
Length = 379
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 568 TPTMKIYCLVMTLILSLMNLSYKC 639
TP + +YC+++ L++ L NL Y C
Sbjct: 111 TPRLVMYCVLLGLVMGLNNLLYSC 134
>06_03_1302 - 29163974-29166907
Length = 977
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Frame = +3
Query: 426 GETVNKVTNDVNSVQHN-DTSNNFEGKKTTMPSINRCLLDMALEKLEINTNNEDLLPRDD 602
GE ++ T +N V + D N+F+ + S RCL D+ L+ + + D
Sbjct: 193 GEQLSGKTTLMNQVYKDIDVRNHFKIRSKVDMSKTRCLSDLLRAVLKHEERETNSMYPDA 252
Query: 603 VDIVSYESELQ-----MPEIMRLIQKDLSEPYSIYTYRYFIHNWP-KLCFLARH 746
+D + E+Q + ++ D+ + S++ R+ + W K+ L R+
Sbjct: 253 IDELKIIEEIQRTFRTVGNRYLMVMDDVDDTSSLHVLRHVLGGWEGKIVCLTRN 306
>12_02_0371 - 18187169-18188386
Length = 405
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/106 (22%), Positives = 42/106 (39%)
Frame = +3
Query: 240 NKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSEKTD 419
N+ ++T+ L Q + QE L + N N+N + T++H + S K
Sbjct: 220 NQRQRTEPL-QITGSSVVHQEFLPQEDERNADNNTSNTNDDDTTNNHGSCPISDHSNKAC 278
Query: 420 GQGETVNKVTNDVNSVQHNDTSNNFEGKKTTMPSINRCLLDMALEK 557
V + +N ND +NF+ +K + N D + K
Sbjct: 279 NVSSIHQDVNDSINVGTQNDNLSNFDAEKDSNGDSNYGTTDANVSK 324
>12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 411 KTDGQGETVNKVTNDVNSVQHNDTSNNFEGKKTTMPS---INRCLLDMALEKLEINTNNE 581
K + G T++K+ + NS ++ EG+ MP + R +L M KL N N
Sbjct: 969 KNEKDGPTLSKLGS--NSTAQLRPKDDGEGRAAAMPPASVMTRLILIMVWRKLIRNPNTY 1026
Query: 582 DLLPRDDVDIVSYESELQMPEIM 650
L +VSY ++MP I+
Sbjct: 1027 SSLLGVIWSLVSYRWGIEMPAII 1049
>10_08_1005 -
22179407-22180122,22180210-22180653,22180737-22180861,
22180939-22181169,22181250-22181805,22181896-22182312,
22182405-22183216,22183653-22183738,22184464-22184534,
22184553-22185573,22186018-22186062,22186252-22186326,
22186797-22186871
Length = 1557
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Frame = +3
Query: 192 ADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANT-----LHINNINSN 356
A NN+ + C + ++ NK+ + ++D + + H T T + ++ N
Sbjct: 311 AQNNLAHQPCEKASS-NKTVERSLGGKSDPSVLGGERHSMMTSCGTSNRDKIKAGSLTKN 369
Query: 357 LTNGTSDHSNGSSEVLSEKTDGQGETVNKVTND 455
L NGTS NGS E +++ + VN+ ND
Sbjct: 370 LENGTSCSRNGSLEHADIQSN---DAVNRNDND 399
>06_01_0047 -
429838-429960,430413-430508,430589-430596,431088-431141,
431226-431274,431368-431466,431560-431639,431926-431989,
432082-432255,432342-432965,433046-433189,433262-433372,
433442-433498,433664-433798
Length = 605
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 198 NNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSN 356
NN N +C ++ N D+ D L + S LN+ + H+N I++N
Sbjct: 29 NNDDNYQCD--SSDNSDSNHMDVPSQDHLNVISTNDLNDMDVSQPHVNEISTN 79
>02_05_0366 -
28313190-28313601,28313759-28314225,28315044-28315782,
28316548-28316615,28316693-28316757,28316922-28320162,
28320239-28320301,28320756-28320824,28321020-28321055,
28322035-28322280,28322531-28322569,28322695-28322816,
28322921-28323004,28323100-28323235,28323486-28323535,
28323620-28323756,28323863-28323951,28324847-28324954,
28325080-28325163,28325841-28325888,28326036-28326153,
28328262-28328347
Length = 2168
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 540 DMALEKLEINTNNEDLLPRDDVDIVSYESELQMPEIMRLIQKD 668
+ L + E ED P D+V ++ ESE+ + E++ QKD
Sbjct: 464 EATLSEEEELAKKEDCDPLDEVKLLQKESEIPLEELLARYQKD 506
>12_01_0010 +
74517-74529,76294-76394,76495-76526,76652-76662,
80420-80924,80999-81181,81282-81373,81491-81764,
81840-82053,82158-82228,82403-82509,82967-83016,
83125-83208,84060-84119,84196-84285,84824-84900,
85022-85106,85224-85304,85492-85595,85793-85842,
86625-86731,87603-87725,87838-87889,88090-88202,
88265-88405,88513-88602
Length = 969
Score = 28.3 bits (60), Expect = 7.5
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 1/125 (0%)
Frame = +3
Query: 282 LCIKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSEKTDGQGETVNKVTNDVN 461
L +K+ L+E+ NTL + S + T S SSE S + G +N
Sbjct: 328 LALKNPRSLSESSNNTLKRKSQESLSMSMTEVPSKRSSESGSRRNSRSG--TRSSLQKIN 385
Query: 462 SVQHNDTSNNFEGKKTTMPSINRCLLDMALEKLEINTNNED-LLPRDDVDIVSYESELQM 638
V G + M + + ++EK + +ED L+ DD S+E E +
Sbjct: 386 EVPDQGNRTRKSGLRAFMGFLG--MGHGSVEKNMLKPRDEDPLIDSDDERPESFEDEFRR 443
Query: 639 PEIMR 653
E+ R
Sbjct: 444 KEMRR 448
>10_02_0114 +
5431578-5431724,5432753-5432797,5433572-5433691,
5433773-5433880,5434900-5435073,5435366-5435503,
5435879-5435986,5436131-5436238,5436340-5436488,
5437594-5437747,5437980-5438140,5438221-5438427,
5438575-5438758,5438846-5438929,5439023-5439222,
5439314-5439373,5439461-5439665
Length = 783
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 480 TSNNFEGKKTTMPSINRCLLDMALEKLEINTNNEDLLPRDDVDIVSYESELQ 635
TS F G + + L ++ +E E+N NN D L R ++V Y LQ
Sbjct: 89 TSTQFSGTSLEIDDLEVKLGELEVELTEVNANN-DKLQRTYNELVEYNIVLQ 139
>08_02_1277 + 25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 28.3 bits (60), Expect = 7.5
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +3
Query: 348 NSNLTNGTSDHSNGSS----EVLSEKTDGQGE-TVNKVTNDVNSVQHNDTSNNFEGKKTT 512
NSN +G SDHS+ +S + + KT G T VTN V S H+++ ++ ++
Sbjct: 1025 NSNTGDGISDHSDINSSTNFSIDAVKTSGLNSWTPVPVTNTVRST-HSNSISSTSVPSSS 1083
Query: 513 MPSINRCLLDMALEKLEINTNNEDLLP 593
P N + EK I+ + + +P
Sbjct: 1084 SPDNNPSMQTSQQEKPSIDIKHGNDVP 1110
>04_01_0252 - 3329712-3331061
Length = 449
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/106 (20%), Positives = 41/106 (38%)
Frame = +3
Query: 240 NKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSEKTD 419
N+ ++T+ L Q + QE L + NN +N N T+ H + ++
Sbjct: 264 NQRQRTEPL-QITGSSVVYQEFLPQEDERNADNNNSTTNADNTTNHHGSCPIHDHLDQAC 322
Query: 420 GQGETVNKVTNDVNSVQHNDTSNNFEGKKTTMPSINRCLLDMALEK 557
+ + +N ND +NF+ +K + N D + K
Sbjct: 323 NVNSIHQDIDDSINEGTQNDNPSNFDSEKDSNGDSNYGTTDANVSK 368
>11_01_0218 -
1704459-1704629,1704895-1705119,1705120-1705277,
1705378-1705463,1705574-1705823,1706220-1707246
Length = 638
Score = 27.9 bits (59), Expect = 9.9
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +3
Query: 411 KTDGQGETVNKVTNDVNSVQHNDTSNNFEGKKTTMPS---INRCLLDMALEKLEINTNNE 581
K + G T++K+ + NS ++ EG MP + R +L M KL N N
Sbjct: 355 KNEKDGPTLSKLGS--NSTAQLRPKDDGEGMAAAMPPASVMTRLILIMVWRKLIRNPNTY 412
Query: 582 DLLPRDDVDIVSYESELQMPEIM 650
L +VSY ++MP I+
Sbjct: 413 SSLLGVIWSLVSYRWGIEMPAII 435
>06_01_1076 - 8778210-8778734
Length = 174
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 104 THLLLVKFIEEYHRHLGKLICHLKLHSSWCL 12
TH + +KF+ YHRH + LKL SW L
Sbjct: 36 THGIHLKFVRLYHRH---HLASLKLKVSWVL 63
>03_02_0643 -
10090720-10091007,10091121-10091228,10091314-10091400,
10091488-10091568,10091669-10091803,10091919-10092140,
10092377-10092457,10092565-10092726,10092851-10093041,
10093190-10093331,10093449-10093547,10093668-10093806,
10094355-10094392
Length = 590
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 309 NETLANTLHINNINSNLTNGTSDHSNGSSEVLSEKTDGQGETV 437
N A+ H N+ N+N ++ +NG+ + + T+G G V
Sbjct: 537 NSASASANHTNHANANANGNSNGKANGNCAMAANGTNGVGLVV 579
>02_04_0372 + 22448908-22449038,22450130-22450197,22451812-22452029
Length = 138
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 288 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSEKTDGQGETVNKVTNDVNSV 467
I+ +H+N T+ + NN +L TS S GSS + D + + + T V +V
Sbjct: 43 IRLNQHINFTVPIAYNYNNTADHLVKNTSMSSRGSSTERGLE-DSKKKLDEEKTKKVEAV 101
Query: 468 QHNDTS 485
Q S
Sbjct: 102 QVGSNS 107
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,904,505
Number of Sequences: 37544
Number of extensions: 330235
Number of successful extensions: 930
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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