Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_I07
(799 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016450-12|AAB65989.1| 278|Caenorhabditis elegans Hypothetical... 90 2e-18
DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin p... 32 0.55
AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin p... 32 0.55
Z82282-10|CAB05277.2| 600|Caenorhabditis elegans Hypothetical p... 31 0.96
Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z70270-7|CAH04652.1| 175|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical p... 29 3.9
U37429-7|AAA79351.2| 218|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z80344-3|CAB02488.2| 491|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical... 29 5.1
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical... 29 5.1
Z98866-14|CAB11553.1| 524|Caenorhabditis elegans Hypothetical p... 28 6.7
Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical pr... 28 6.7
U80439-6|AAB37642.1| 564|Caenorhabditis elegans Ezrin/radixin/m... 28 6.7
U80439-5|AAB37643.1| 563|Caenorhabditis elegans Ezrin/radixin/m... 28 6.7
AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein. 28 6.7
AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein. 28 6.7
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 28 6.7
AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein. 28 6.7
AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv prot... 28 6.7
AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein. 28 6.7
AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein. 28 6.7
AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein. 28 6.7
U28944-18|AAA68375.2| 246|Caenorhabditis elegans Helix loop hel... 28 8.9
U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical pr... 28 8.9
>AF016450-12|AAB65989.1| 278|Caenorhabditis elegans Hypothetical
protein B0238.10 protein.
Length = 278
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Frame = +3
Query: 582 DLLPRDDVDIVSYESELQMPEIMRLIQKDLSEPYSIYTYRYFIHNWPKLCFLA--RHEGK 755
D L ++ IV+Y+ E Q+ +IMRLI KDLSEPYSIYTYRYF+HNWP+ CFLA +
Sbjct: 88 DELASPNIRIVAYKDESQINDIMRLITKDLSEPYSIYTYRYFLHNWPEYCFLAYDQTNNT 147
Query: 756 CIGAIVCKLXI 788
IGA++CKL +
Sbjct: 148 YIGAVLCKLEL 158
>DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin
proteoglycan-4 protein.
Length = 782
Score = 31.9 bits (69), Expect = 0.55
Identities = 24/113 (21%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Frame = +3
Query: 171 IYVMNKVADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTL-HINNI 347
+Y NK + N+ K + +T ++ + +D + + + S H N T + L HI+
Sbjct: 458 MYSNNKTEELNISE-KNNVTSTFSEPSEKEDEASTTVISVISPLHTNATDSEILEHISEK 516
Query: 348 NSNLTNGTSDHSNGSSEVLSEKTDGQGETVNKVTNDVNSVQHNDTSNNFEGKK 506
++ ++G+S +G +G GE ++ NS + N + ++ E +
Sbjct: 517 STEESSGSSGEMSGDGSDNEASGEGSGEYDASGSSGDNSGEFNSSGSSGEASE 569
>AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin
proteoglycan protein 4 protein.
Length = 782
Score = 31.9 bits (69), Expect = 0.55
Identities = 24/113 (21%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Frame = +3
Query: 171 IYVMNKVADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTL-HINNI 347
+Y NK + N+ K + +T ++ + +D + + + S H N T + L HI+
Sbjct: 458 MYSNNKTEELNISE-KNNVTSTFSEPSEKEDEASTTVISVISPLHTNATDSEILEHISEK 516
Query: 348 NSNLTNGTSDHSNGSSEVLSEKTDGQGETVNKVTNDVNSVQHNDTSNNFEGKK 506
++ ++G+S +G +G GE ++ NS + N + ++ E +
Sbjct: 517 STEESSGSSGEMSGDGSDNEASGEGSGEYDASGSSGDNSGEFNSSGSSGEASE 569
>Z82282-10|CAB05277.2| 600|Caenorhabditis elegans Hypothetical
protein T07G12.6 protein.
Length = 600
Score = 31.1 bits (67), Expect = 0.96
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +3
Query: 150 MCK*PR*IYVMNKVADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQ---EHLNETL 320
MCK R I + +K + + Q + SKK KDL++ + C K +H + T
Sbjct: 502 MCKGIRNIRLHHKKSHPDEQLTGFGIKSVVRTSKKGKDLAKVWDECFKKNRVLQHGSGTD 561
Query: 321 ANTLHINNINSNLTNGTSDHSNGSSEVLSEKTD 419
+N LH + + +G+ + L E D
Sbjct: 562 SNLLHFSRQDKGSKRSQKSMDSGAKQKLDEARD 594
>Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical
protein W09C5.2 protein.
Length = 459
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/76 (21%), Positives = 35/76 (46%)
Frame = +3
Query: 222 SQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEV 401
++ + K + + +S +EL ++++ ++ A + + + S L NG S S +
Sbjct: 354 TEKTSARKKRSDERMSALEELEQQNKQKIDAKRAEIIRLRHEISELKNGNLTSSQTSLAM 413
Query: 402 LSEKTDGQGETVNKVT 449
+E Q T+N T
Sbjct: 414 YNENNHSQNSTLNSTT 429
>Z70270-7|CAH04652.1| 175|Caenorhabditis elegans Hypothetical
protein C53D6.10 protein.
Length = 175
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 207 QNIKCSQMNTKNKSKKTKDLSQADELCIKS-QEHLNETLANTL 332
+N K S+ TKNK KK K + ADE + S +E L+ +TL
Sbjct: 90 KNGKSSETKTKNKVKKNKSKASADESQMGSAEERLSTNRPSTL 132
>Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 29.1 bits (62), Expect = 3.9
Identities = 27/135 (20%), Positives = 60/135 (44%)
Frame = +3
Query: 240 NKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSEKTD 419
+ +K ++L + E+ ++ E L T ++ IN T TS+H N + + +T
Sbjct: 387 SNEEKDRELDEPLEITDQTVETRFFELETTKNLEKINRGTT--TSEHGNILIKTTASQTP 444
Query: 420 GQGETVNKVTNDVNSVQHNDTSNNFEGKKTTMPSINRCLLDMALEKLEINTNNEDLLPRD 599
E V V + + + NF+ K+ + + + L + + L+I D ++
Sbjct: 445 VSQEVVQLVNYEPINFTKAQSDRNFDEKENMIRAFSFKLSESFYKDLKILVVERD-RAKE 503
Query: 600 DVDIVSYESELQMPE 644
+DI+ ++ ++ E
Sbjct: 504 AMDILPAKTMKELSE 518
>Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 29.1 bits (62), Expect = 3.9
Identities = 27/135 (20%), Positives = 60/135 (44%)
Frame = +3
Query: 240 NKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSEKTD 419
+ +K ++L + E+ ++ E L T ++ IN T TS+H N + + +T
Sbjct: 387 SNEEKDRELDEPLEITDQTVETRFFELETTKNLEKINRGTT--TSEHGNILIKTTASQTP 444
Query: 420 GQGETVNKVTNDVNSVQHNDTSNNFEGKKTTMPSINRCLLDMALEKLEINTNNEDLLPRD 599
E V V + + + NF+ K+ + + + L + + L+I D ++
Sbjct: 445 VSQEVVQLVNYEPINFTKAQSDRNFDEKENMIRAFSFKLSESFYKDLKILVVERD-RAKE 503
Query: 600 DVDIVSYESELQMPE 644
+DI+ ++ ++ E
Sbjct: 504 AMDILPAKTMKELSE 518
>U37429-7|AAA79351.2| 218|Caenorhabditis elegans Hypothetical
protein F09E5.11 protein.
Length = 218
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Frame = +3
Query: 234 TKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSEK 413
T SK K+ + D + K ++ L + + + LT DH+ +S +K
Sbjct: 26 TPEVSKSCKEFYKKDVVSYKDLVNIKTKLPDGIPVFVFFDRLTLRREDHTYHASVEFRKK 85
Query: 414 TD-----GQGETVNKVTNDVNSVQHNDTSNNFEGKKTTMPSINRCLLDM 545
T+ + ++ ++ DV+ VQ +++ E M ++NR ++ +
Sbjct: 86 TEELRIQQEQDSYKRLIRDVDPVQKYGKTDHMENFGVEMRAVNRQMISV 134
>Z80344-3|CAB02488.2| 491|Caenorhabditis elegans Hypothetical
protein F15D4.5 protein.
Length = 491
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/77 (18%), Positives = 35/77 (45%)
Frame = +3
Query: 177 VMNKVADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSN 356
++ K+ + NI+C++ K + ++++ + + Q N TLA + ++
Sbjct: 233 LITKIDKTVIDNIRCTKDVAKIVKQLVENINSTHAVNKEIQNDKNSTLAEAKRTITLANS 292
Query: 357 LTNGTSDHSNGSSEVLS 407
N D +N + E ++
Sbjct: 293 TINSNKDWNNNTQEAIN 309
>AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical
protein W02D3.10b protein.
Length = 946
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 441 KVTNDVNSVQHNDTSNNFEGKKTTMPSINRCLLDMALEKLEINTNNEDL 587
K T DV++ + + T PSI+R ++ +EK+ I+T+++D+
Sbjct: 228 KTTEDVDAFELISEISASSSSGITTPSIDRFCDEVIVEKIGIDTSSDDM 276
>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
protein W02D3.10a protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 441 KVTNDVNSVQHNDTSNNFEGKKTTMPSINRCLLDMALEKLEINTNNEDL 587
K T DV++ + + T PSI+R ++ +EK+ I+T+++D+
Sbjct: 228 KTTEDVDAFELISEISASSSSGITTPSIDRFCDEVIVEKIGIDTSSDDM 276
>Z98866-14|CAB11553.1| 524|Caenorhabditis elegans Hypothetical
protein Y49E10.17 protein.
Length = 524
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/105 (19%), Positives = 42/105 (40%)
Frame = +3
Query: 210 NIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDHSNG 389
NI S N S ++ S + + + + + + +N +SN+++ + SNG
Sbjct: 96 NISSSSRQPSNGSFRSSGSSNGSSSSSRRSSNGSSSSSGSTS-DNSSSNISSSSRRSSNG 154
Query: 390 SSEVLSEKTDGQGETVNKVTNDVNSVQHNDTSNNFEGKKTTMPSI 524
SS S + G ++ ++S ++N + P I
Sbjct: 155 SSRSSSSSSVGSMSSIASNVGSIDSFSDGSVNSNSNQQLVPNPEI 199
>Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical
protein T23G7.3 protein.
Length = 339
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/129 (20%), Positives = 51/129 (39%)
Frame = +3
Query: 201 NVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDH 380
N ++K + NT + ++ D I + + LA +N T +
Sbjct: 52 NADSVKL-KANTSGRGLGADKMADYDSTWISHHDDFADLLAA---LNKNKEQEPEQTEEE 107
Query: 381 SNGSSEVLSEKTDGQGETVNKVTNDVNSVQHNDTSNNFEGKKTTMPSINRCLLDMALEKL 560
N ++E +S + + +++ + + + DTSN + K + R D A EK+
Sbjct: 108 KNAAAEKISIEL--KSKSIRRRIHYQKFTRAKDTSNYSDSHKKGILGYGRLKSDNAEEKI 165
Query: 561 EINTNNEDL 587
E T N +
Sbjct: 166 EEKTENSSV 174
>U80439-6|AAB37642.1| 564|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 288 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 410
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 444 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 483
>U80439-5|AAB37643.1| 563|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform a protein.
Length = 563
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 288 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 410
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 443 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 482
>AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein.
Length = 566
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 288 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 410
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 446 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 485
>AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 288 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 410
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 443 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 482
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 339 NNINSNLTNGTSDHSN--GSSEVLSEKTDGQGETVNKVTNDVNSVQHNDTSNNF 494
+N SN+ + SN SS +S+K +G G +NK + + + + +NNF
Sbjct: 676 SNTESNIKTSSIKESNIETSSLKVSKKIEGSGNKMNKKSKKSDDKKISKANNNF 729
>AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 288 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 410
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 444 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 483
>AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv
protein.
Length = 566
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 288 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 410
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 446 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 485
>AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 288 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 410
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 443 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 482
>AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 288 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 410
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 444 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 483
>AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 288 IKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSE 410
I SQ+H + +N+ H++N +++ T D NG++E+ ++
Sbjct: 443 IHSQQH-TQHYSNSHHVSNGHAHDETATDDEDNGATELTND 482
>U28944-18|AAA68375.2| 246|Caenorhabditis elegans Helix loop helix
protein 14 protein.
Length = 246
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +3
Query: 231 NTKNKSKKTKDLSQADEL--CIKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEVL 404
N TK S+AD L +K + L L +++S+ + T ++SN +
Sbjct: 127 NRLQPKNHTKKWSKADTLREAVKYIQQLQVLLNQDPQQPSVSSSTPDYTMNNSNNFNNYA 186
Query: 405 SEKTDGQGETVNKVTNDVNSVQHNDTSNNFEGKKTTMPS 521
++ N + SV H D S+NF +++ S
Sbjct: 187 VKEEFSMYLPQNYCPQNQMSVPHGDVSHNFNSPTSSVSS 225
>U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical
protein C05D10.1a protein.
Length = 529
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +3
Query: 177 VMNKVADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSN 356
+MN + + CS++N ++ D S +L + + +TL + +N + S
Sbjct: 72 IMNHLHAPQCKCTTCSKVNQPGAEEQKNDTSVLSQLFPNASDQQLKTLLDLSKMNKLPSQ 131
Query: 357 LTNGTSDHSNGSS 395
+ + D NGSS
Sbjct: 132 VVH--KDQQNGSS 142
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,603,430
Number of Sequences: 27780
Number of extensions: 334865
Number of successful extensions: 1101
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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