Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_I07
(799 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g38130.2 68415.m04681 GCN5-related N-acetyltransferase, putat... 96 3e-20
At2g38130.1 68415.m04680 GCN5-related N-acetyltransferase, putat... 96 3e-20
At1g06720.1 68414.m00714 expressed protein contains Pfam domain,... 35 0.054
At5g13780.1 68418.m01607 GCN5-related N-acetyltransferase, putat... 32 0.38
At5g57970.1 68418.m07253 methyladenine glycosylase family protei... 32 0.51
At4g15090.1 68417.m02318 far-red impaired response protein (FAR1... 32 0.51
At2g39340.1 68415.m04829 SAC3/GANP family protein contains Pfam ... 31 0.67
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 31 0.89
At3g18810.1 68416.m02389 protein kinase family protein contains ... 31 1.2
At5g62110.1 68418.m07796 hypothetical protein 30 1.5
At2g46380.1 68415.m05773 hypothetical protein weak similarity to... 30 1.5
At1g59540.1 68414.m06694 kinesin motor protein-related similar t... 29 2.7
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 29 2.7
At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger) fa... 29 2.7
At1g15125.1 68414.m01806 S-adenosyl-L-methionine:carboxyl methyl... 29 3.6
At3g28770.1 68416.m03591 expressed protein 29 4.7
At3g23670.1 68416.m02976 phragmoplast-associated kinesin-related... 29 4.7
At1g18710.1 68414.m02334 myb family transcription factor (MYB47)... 28 6.2
At1g10450.1 68414.m01176 paired amphipathic helix repeat-contain... 28 6.2
At5g66880.1 68418.m08431 serine/threonine protein kinase, putati... 28 8.3
At5g58880.1 68418.m07377 hypothetical protein 28 8.3
At4g39840.1 68417.m05645 expressed protein 28 8.3
At3g24880.1 68416.m03120 expressed protein 28 8.3
At2g20570.1 68415.m02402 golden2-like transcription factor (GLK1... 28 8.3
>At2g38130.2 68415.m04681 GCN5-related N-acetyltransferase, putative
similar to SP|Q03503 L-A virus GAG protein
N-acetyltransferase (EC 2.3.1.-) {Saccharomyces
cerevisiae}; contains Pfam profile PF00583:
acetyltransferase, GNAT family
Length = 190
Score = 95.9 bits (228), Expect = 3e-20
Identities = 38/79 (48%), Positives = 56/79 (70%)
Frame = +3
Query: 558 LEINTNNEDLLPRDDVDIVSYESELQMPEIMRLIQKDLSEPYSIYTYRYFIHNWPKLCFL 737
+E +++ +++ SY E +P IM L+ ++LSEPYSI+TYRYF++ WP+LCFL
Sbjct: 1 MEKEMEDKEEFDEGEIEYTSYAGEHHLPLIMSLVDQELSEPYSIFTYRYFVYLWPQLCFL 60
Query: 738 ARHEGKCIGAIVCKLXIHR 794
A H+GKC+G IVCK+ HR
Sbjct: 61 AFHKGKCVGTIVCKMGDHR 79
>At2g38130.1 68415.m04680 GCN5-related N-acetyltransferase, putative
similar to SP|Q03503 L-A virus GAG protein
N-acetyltransferase (EC 2.3.1.-) {Saccharomyces
cerevisiae}; contains Pfam profile PF00583:
acetyltransferase, GNAT family
Length = 190
Score = 95.9 bits (228), Expect = 3e-20
Identities = 38/79 (48%), Positives = 56/79 (70%)
Frame = +3
Query: 558 LEINTNNEDLLPRDDVDIVSYESELQMPEIMRLIQKDLSEPYSIYTYRYFIHNWPKLCFL 737
+E +++ +++ SY E +P IM L+ ++LSEPYSI+TYRYF++ WP+LCFL
Sbjct: 1 MEKEMEDKEEFDEGEIEYTSYAGEHHLPLIMSLVDQELSEPYSIFTYRYFVYLWPQLCFL 60
Query: 738 ARHEGKCIGAIVCKLXIHR 794
A H+GKC+G IVCK+ HR
Sbjct: 61 AFHKGKCVGTIVCKMGDHR 79
>At1g06720.1 68414.m00714 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 1147
Score = 35.1 bits (77), Expect = 0.054
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 4/132 (3%)
Frame = +3
Query: 252 KTKDLSQADELCIKSQEHLNETL--ANTLHINNINSNLTNGTSDHSNGSSEVLSEKTDGQ 425
K K L D+L + + + + ++IN + + +D G + D
Sbjct: 325 KKKGLRDRDKLFYAPMSGIGDLVYDKDAVYININSHQVQYSKTDDGKGEPTNKGKGRDVG 384
Query: 426 GETVNKVTNDVNSVQH--NDTSNNFEGKKTTMPSINRCLLDMALEKLEINTNNEDLLPRD 599
+ V + N SV + T NF GKKT+ S + + A L +++E D
Sbjct: 385 EDLVKSLQNTKYSVDEKLDKTFINFFGKKTSASSETKLKAEDAYHSLPEGSDSESQSGDD 444
Query: 600 DVDIVSYESELQ 635
+ DIV ESE++
Sbjct: 445 EEDIVGNESEMK 456
>At5g13780.1 68418.m01607 GCN5-related N-acetyltransferase, putative
similar to SP|P07347 N-terminal acetyltransferase
complex ARD1 subunit (Arrest-defective protein 1)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00583: acetyltransferase, GNAT family
Length = 192
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 669 LSEPYSIYTYRYFIHNWPKLCFLAR-HEGKCIGAIVCKLXIHRN 797
L E Y + Y Y I +WP+L ++A + G+ +G ++ K+ N
Sbjct: 23 LPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESN 66
>At5g57970.1 68418.m07253 methyladenine glycosylase family protein
similar to SP|P05100 DNA-3-methyladenine glycosylase I
(EC 3.2.2.20) (3-methyladenine-DNA glycosylase I,
constitutive) {Escherichia coli}; contains Pfam profile
PF03352: Methyladenine glycosylase
Length = 347
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +3
Query: 174 YVMNKVADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEH-LNETLANTLHINNIN 350
++ +K +++ ++ S +KT + + + SQ+H LN H N+N
Sbjct: 31 FITHKAVSKSLRKLERSSSGRTGSDEKTSYATPTETVSSSSQKHTLNAASILRRHEQNLN 90
Query: 351 SNLTNGTSDHSNGSSE 398
SNL+ S S+ S +
Sbjct: 91 SNLSLNASFSSDASMD 106
>At4g15090.1 68417.m02318 far-red impaired response protein (FAR1) /
far-red impaired responsive protein (FAR1) identical to
far-red impaired response protein FAR1 [Arabidopsis
thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101
domain: FAR1 family
Length = 768
Score = 31.9 bits (69), Expect = 0.51
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +3
Query: 306 LNETLANTLHINNINSNLTNGTSDHSNGSSEVLSEKTDGQGETVNKVTNDVNSVQHNDTS 485
L ETL N + +NN +N+T S +NG+ E ++ G T K Q + S
Sbjct: 597 LVETLKNCVDMNNARNNITESNSQLNNGTHEEENQVMAGVKATKKKTVYRKRKGQ-QEAS 655
Query: 486 NNFEGKKTTMP 518
E +++ P
Sbjct: 656 QMLESQQSLQP 666
>At2g39340.1 68415.m04829 SAC3/GANP family protein contains Pfam
profile: PF03399 SAC3/GANP family
Length = 1006
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +3
Query: 378 HSNGSSEVLSEKTD-GQGETVNKVTNDVNSVQHNDTSNN---FEGKKTTMPSINRCLLDM 545
HSN + E+LS + + + ++ SV+ TS N F T P++N CL+D+
Sbjct: 841 HSNNNRELLSSMSRLSEEDKKDEAVRHALSVRAAVTSGNYVMFFRLYKTAPNMNSCLMDL 900
Query: 546 ALEKLEINTNN 578
+EK+ N
Sbjct: 901 YVEKMRYKAVN 911
>At4g14760.1 68417.m02271 M protein repeat-containing protein contains
Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 31.1 bits (67), Expect = 0.89
Identities = 24/92 (26%), Positives = 41/92 (44%)
Frame = +3
Query: 309 NETLANTLHINNINSNLTNGTSDHSNGSSEVLSEKTDGQGETVNKVTNDVNSVQHNDTSN 488
NE L + + +LT G S ++ S + E D E+ V +NS + + N
Sbjct: 1421 NELLMKDNPRDQVTDSLTYGRSQGTSHGSNDMFEFWDESAESETSVNFLINSNKPQRSLN 1480
Query: 489 NFEGKKTTMPSINRCLLDMALEKLEINTNNED 584
+ ++ PSI ++KLE++ N ED
Sbjct: 1481 SNLRHQSRNPSIESDKAVGVVDKLELSRNIED 1512
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +3
Query: 309 NETLANTLHINNINSNLTNGTSDHSNGSSEVLSEKTDGQGETVNKVTNDVNSVQHNDTSN 488
N N + NN N+N NG +++ N + +G N + N+ +N+ +N
Sbjct: 71 NNNDGNNGNNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNNGNDNNGNNNNGNN 130
Query: 489 N 491
N
Sbjct: 131 N 131
>At5g62110.1 68418.m07796 hypothetical protein
Length = 691
Score = 30.3 bits (65), Expect = 1.5
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +3
Query: 324 NTLHINNINSNLTNGTSDHSNGSSEVLSEKTDGQGETVNKVTNDVNSVQHNDTSNNFEGK 503
N L INN+N N T + ++E+ D T+N+V + N N N E
Sbjct: 533 NNLSINNVNDNSNEETLNSIAANNEMNFTILD--VNTINQVNGNSNEETLNSIVANSEIN 590
Query: 504 KTTMP--SINRCLLDMALEKL-EINTNNEDLLPRDDVDIVSYESE 629
TT+ +IN+ + E L I N+E DV+I++ E +
Sbjct: 591 FTTLDVNTINQVDNNFNEETLNSIAANSEMNFTTLDVNIINEEEQ 635
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +3
Query: 180 MNKVADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNL 359
+N +A NN N +NT N+ + + + S+ +N T + IN +++N
Sbjct: 549 LNSIAANNEMNFTILDVNTINQVNGNSNEETLNSIVANSE--INFTTLDVNTINQVDNNF 606
Query: 360 TNGTSDHSNGSSEV 401
T + +SE+
Sbjct: 607 NEETLNSIAANSEM 620
>At2g46380.1 68415.m05773 hypothetical protein weak similarity to
extra-large G-protein [Arabidopsis thaliana] GI:3201682
Length = 732
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +3
Query: 282 LCIKSQEHLNETLA-NTLHINNINSNLTNGTSDHSNGSSEVLSEKTDGQGETVNKVTNDV 458
LC K+++ + L+ ++ + +T+G+S+ + S+ L + DGQ ET + V ND
Sbjct: 39 LCAKNKDREADLLSVKSVENRSKEIEVTSGSSEEESDSNASLRHQQDGQTETWD-VHNDP 97
Query: 459 NSVQHNDTSNNFEGKKTTMPSINRCLLDMALEKLEINTNN 578
+S + S N + + R LE +T+N
Sbjct: 98 SSKMNVVDSGNNDSQPGLDQIRKRTTKRCDLEGFRFSTSN 137
>At1g59540.1 68414.m06694 kinesin motor protein-related similar to
kinesin motor protein (kin2) GI:2062751 from (Ustilago
maydis)
Length = 823
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +3
Query: 213 IKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDHSNGS 392
++C ++ T+ + +K K Q E CIK Q+ + I N+N+ +TN +
Sbjct: 379 LECERLKTQLEEEKRKQKEQ--ENCIKEQQ---------MKIENLNNFVTNSDFKRNQSE 427
Query: 393 SEVLSEKTDGQGETVNKVTNDV 458
++S KT VN T+DV
Sbjct: 428 DFIISRKTPDGLCNVND-TSDV 448
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 333 HINNINSNLTNGTSDHSNGSSEVLSEKTDGQGET 434
H N++ L+ G DHS S+ S T G G++
Sbjct: 102 HRKNLSQTLSGGGDDHSTSSATTTSAVTTGSGKS 135
>At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger)
family protein low similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 427
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = +3
Query: 201 NVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDH 380
N++ + +++K+ KD S +DE C + ++ + T ++ + NN ++ NGT
Sbjct: 236 NIEQDTSEANDDDDQNKRGKD-SSSDEPCERQRKKRSATQPSSSNANNNDNCAGNGTEQT 294
Query: 381 SNGSSEVLS 407
S V+S
Sbjct: 295 HQRDSRVIS 303
>At1g15125.1 68414.m01806 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein low similarity to
caffeine synthase [Camellia sinensis] GI:9967143;
contains Pfam profile PF03492: SAM dependent carboxyl
methyltransferase
Length = 347
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +3
Query: 522 INRCLLDMALEKLEINTNNEDL---LPRDDVDIVSYESELQMPEIMRLIQKDLSE 677
+ CL+DMA E+ E+N+ N + P++ DI+ EL++ ++ L D +
Sbjct: 226 LGSCLMDMAKEEEEVNSFNLPIYYTTPKELEDIIRSNGELKIDKMETLGSMDAQD 280
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +3
Query: 201 NVQNIKCSQMNTKNKS--KKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTS 374
N + K +N + +S TKD S ++ +K + NE+ N+ + + + NG S
Sbjct: 492 NKETTKGENVNIQGESIGDSTKDNSLENKEDVKPKVDANESDGNSTKERHQEAQVNNGVS 551
Query: 375 DHSNGSSEVLSEKTDGQGETVNKVTND 455
+ +++ ++V TND
Sbjct: 552 TEDKNLDNIGADEQKKNDKSVEVTTND 578
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +3
Query: 324 NTLHINNINSNLTNGTSDHSNGSSEVLSEKTDGQGETVNKVTNDVNSVQHNDTSN--NFE 497
N I +++LTN TS NG +K D +++ T + + D++N E
Sbjct: 1785 NVTEIQGNDNSLTNSTSSEPNG------DKLDTNKDSMKNNTMEAQGGSNGDSTNGETEE 1838
Query: 498 GKKTTMPSINRCLLDMALEKLEINTNNEDLLPRDDVDIVSYESE 629
K++ + N+ + D+ E + NN+ DD+ + ++E
Sbjct: 1839 TKESNVSMNNQNMQDVGSN--ENSMNNQTTGTGDDIISTTTDTE 1880
>At3g23670.1 68416.m02976 phragmoplast-associated kinesin-related
protein, putative similar to kinesin like protein
GB:CAB10194 from [Arabidopsis thaliana]
Length = 1313
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/116 (19%), Positives = 47/116 (40%)
Frame = +3
Query: 195 DNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTS 374
DNN + + ++N+ ++ KD S + HL + A +++ + N S
Sbjct: 534 DNNQEMSRVEKINSSLQTVVLKDESY-------NNSHLKSSEATDVNMEDACCQTENNGS 586
Query: 375 DHSNGSSEVLSEKTDGQGETVNKVTNDVNSVQHNDTSNNFEGKKTTMPSINRCLLD 542
+ N + V DG + +TN ++S + N K +PS +++
Sbjct: 587 ETDNALT-VAETMDDGSSVQPDSITNSLHSCISDTNQGNSPSKAENIPSCQDLVIE 641
>At1g18710.1 68414.m02334 myb family transcription factor (MYB47)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 267
Score = 28.3 bits (60), Expect = 6.2
Identities = 27/133 (20%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Frame = +3
Query: 309 NETLANTLHINNINSNLTNGTSDHSNGSSEVLSEKTDGQGETVNKVTNDVNSVQHNDTSN 488
+E + L +N N++ N ++ S ++E S + G +NK+ ++S QH+
Sbjct: 126 HEPIIKHLTVNTTNADCGNSSTTTSPSTTE--SSPSSGSSRLLNKLAAGISSRQHSLDRI 183
Query: 489 NFEGKKTTMPSINRCLLDMALEKLEINTNNEDLLPRDDVDIVSYESELQM---PEIMRLI 659
+ + + S ++ + E+ E D + +D S ++Q+ E+ RL+
Sbjct: 184 KYILSNSIIESSDQAKEE---EEKEEEEEERDSMMGQKID-GSEGEDIQIWGEEEVRRLM 239
Query: 660 QKDLSEPYSIYTY 698
+ D + Y + +Y
Sbjct: 240 EIDAMDMYEMTSY 252
>At1g10450.1 68414.m01176 paired amphipathic helix repeat-containing
protein similar to Sin3 protein [Yarrowia lipolytica]
GI:18076824; contains Pfam profile PF02671: Paired
amphipathic helix repeat
Length = 1173
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +3
Query: 180 MNKVADNNVQNIKCSQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTL-HINNINSN 356
+ KV DN N + K KT+ E C K E+ N+T + L ++ +
Sbjct: 770 LQKVTDNVRSNKDKQSCDKKGAKNKTRAEDDKQENCHKLSEN-NKTASEMLVSGTKVSCH 828
Query: 357 LTNGTSDHSNGSSEVLSEKTDG-QGE 431
N + NG V E +G QGE
Sbjct: 829 EENNRVMNCNGRGSVAGEMANGNQGE 854
>At5g66880.1 68418.m08431 serine/threonine protein kinase, putative
similar to serine-threonine protein kinase [Triticum
aestivum] gi|2055374|gb|AAB58348
Length = 361
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 504 KTTMPSI-NRCLLDMALEKLEINTNNEDLLPRDDVDIVS 617
+ T+P++ NRCL D + L+++ + +D ++DI S
Sbjct: 315 EATIPAVRNRCLDDFMTDNLDLDDDMDDFDSESEIDIDS 353
>At5g58880.1 68418.m07377 hypothetical protein
Length = 1088
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/71 (22%), Positives = 35/71 (49%)
Frame = +3
Query: 465 VQHNDTSNNFEGKKTTMPSINRCLLDMALEKLEINTNNEDLLPRDDVDIVSYESELQMPE 644
+ H + + GK+ T+ ++ ++ E+ E+ N+E +++ D S E + E
Sbjct: 374 IDHTEQNLPLNGKEATIEDDDKSVVSRKSEEKEVEMNDETDSNKEECDDSSCSEESE-SE 432
Query: 645 IMRLIQKDLSE 677
+ RL + +L E
Sbjct: 433 LCRLNKAELRE 443
>At4g39840.1 68417.m05645 expressed protein
Length = 451
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/74 (22%), Positives = 32/74 (43%)
Frame = +3
Query: 222 SQMNTKNKSKKTKDLSQADELCIKSQEHLNETLANTLHINNINSNLTNGTSDHSNGSSEV 401
S +TKN++K K + + S + + T + + +NS + S S S
Sbjct: 103 SSSSTKNQTKLAKTTTMGTSHKLNSTKSSSNTTKTSSELKKLNSGTKSTNSTSSIKKSAD 162
Query: 402 LSEKTDGQGETVNK 443
LS+ + + +T K
Sbjct: 163 LSKSSSSKNKTTIK 176
>At3g24880.1 68416.m03120 expressed protein
Length = 1957
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/73 (28%), Positives = 29/73 (39%)
Frame = +3
Query: 300 EHLNETLANTLHINNINSNLTNGTSDHSNGSSEVLSEKTDGQGETVNKVTNDVNSVQHND 479
+ LN+ L N I+ N+T S H NG + + +GE V D S
Sbjct: 1641 QQLNKQLKGMGRGNMIHQNITVDQS-HLNGLTMPQGNQATEKGEIAVPVRPDQQSSVGTT 1699
Query: 480 TSNNFEGKKTTMP 518
TS N + K P
Sbjct: 1700 TSTNLQSKPFVSP 1712
>At2g20570.1 68415.m02402 golden2-like transcription factor (GLK1)
identical to golden2-like transcription factor
GI:13311003 from [Arabidopsis thaliana]; contains Pfam
profile: PF00249 Myb-like DNA-binding domain
Length = 420
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +3
Query: 357 LTNGTSDHSNGSSEVL--SEKTDGQGET 434
L+ S+H N SS + S+KTD QGET
Sbjct: 72 LSGDFSNHMNASSTITTTSDKTDSQGET 99
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,358,580
Number of Sequences: 28952
Number of extensions: 299539
Number of successful extensions: 934
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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