Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_I04
(810 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)... 228 4e-60
At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putat... 226 1e-59
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 82 5e-16
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 79 3e-15
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 34 0.097
At1g80910.1 68414.m09493 expressed protein 34 0.13
At3g55120.1 68416.m06121 chalcone-flavanone isomerase / chalcone... 32 0.39
At1g16020.2 68414.m01922 expressed protein 32 0.52
At1g16020.1 68414.m01921 expressed protein 32 0.52
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 30 1.6
At3g57570.1 68416.m06410 expressed protein 30 2.1
At3g62170.1 68416.m06985 pectinesterase family protein contains ... 28 6.4
At4g16146.1 68417.m02449 expressed protein 28 8.4
At2g32410.1 68415.m03960 auxin-resistance protein, putative stro... 28 8.4
>At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)
identical to SP|Q96291 2-cys peroxiredoxin BAS1,
chloroplast precursor {Arabidopsis thaliana}; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 266
Score = 228 bits (557), Expect = 4e-60
Identities = 110/193 (56%), Positives = 141/193 (73%), Gaps = 2/193 (1%)
Frame = +3
Query: 108 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 284
+PL K AP F+A AV + EF + LSDY GK YV+LFFYPLDFTFVCPTEI AFS++
Sbjct: 72 LPLVGNK-APDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRH 130
Query: 285 DEFRKIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEET 464
EF K+ EVLG S DS F+HLAW+ T RK GGLG +N PLISD + IS+ +GVL +
Sbjct: 131 SEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQ 190
Query: 465 GIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPANWRPGAK 641
GI RGLFIID + ++ TIN+L +GRSV+ET+R +QA Q+ ++ EVCPA W+PG K
Sbjct: 191 GIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYIQENPDEVCPAGWKPGEK 250
Query: 642 TIKPDTKAAQEYF 680
++KPD K ++EYF
Sbjct: 251 SMKPDPKLSKEYF 263
>At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putative
very strong similarity to SP|Q96291 2-cys peroxiredoxin
BAS1, chloroplast precursor {Arabidopsis thaliana};
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 273
Score = 226 bits (553), Expect = 1e-59
Identities = 108/193 (55%), Positives = 142/193 (73%), Gaps = 2/193 (1%)
Frame = +3
Query: 108 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 284
+PL K AP F+A AV + EF + LS+Y GK YV+LFFYPLDFTFVCPTEI AFS++
Sbjct: 79 LPLVGNK-APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRY 137
Query: 285 DEFRKIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEET 464
+EF K+ EVLG S DS F+HLAW+ T RK GGLG +N PL+SD + IS+ +GVL +
Sbjct: 138 EEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQ 197
Query: 465 GIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPANWRPGAK 641
GI RGLFIID + ++ TIN+L +GRSV+ET+R +QA Q+ ++ EVCPA W+PG K
Sbjct: 198 GIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYVQENPDEVCPAGWKPGEK 257
Query: 642 TIKPDTKAAQEYF 680
++KPD K ++EYF
Sbjct: 258 SMKPDPKLSKEYF 270
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 81.8 bits (193), Expect = 5e-16
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Frame = +3
Query: 186 LSDY-KGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWIN 362
L DY + VLF +P DFT VC TE+ A ++ A EF K G ++LG S D +H WI
Sbjct: 24 LHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHKDWIK 83
Query: 363 TPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITINDLPV 542
+N P+I+D + I ++D P R L I+ ++ +
Sbjct: 84 DIEAFNHGSKVNYPIIADPNKEIIPQLNMIDPIENGPSRALHIVGPDSKIKLSFLYPSTT 143
Query: 543 GRSVEETLRLVQAFQFTDKHGE--VCPANWRP 632
GR+++E LR + + KH P NW+P
Sbjct: 144 GRNMDEVLRALDSLLMASKHNNKIATPVNWKP 175
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 79.0 bits (186), Expect = 3e-15
Identities = 44/137 (32%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Frame = +3
Query: 174 KDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLA 353
K +SL YKGK VVL+FYP D T C + AF + ++F+K G EV+G S D +H A
Sbjct: 86 KPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSASHKA 145
Query: 354 WINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETG-IPFRGLFIIDDKQNLRQITIN 530
+ + + + L+SD+ +++ +D+GV + G +P R +++D ++ I N
Sbjct: 146 FASKYK-------LPYTLLSDEGNKVRKDWGVPGDLFGALPGRQTYVLDKNGVVQLIYNN 198
Query: 531 DLPVGRSVEETLRLVQA 581
+ ++ETL+ ++A
Sbjct: 199 QFQPEKHIDETLKFLKA 215
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 34.3 bits (75), Expect = 0.097
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 159 VNGEFKDISLSD-YKGKYVVLFFYPLDFTFVCPTE-IIAFSEKADEFRKIGCE-VLGAST 329
V+ +F LSD +KGK VV+F P +T VC + + ++ D+F+ G + V+ S
Sbjct: 58 VSSKFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSV 117
Query: 330 DSHFTHLAW 356
+ F W
Sbjct: 118 NDPFAINGW 126
>At1g80910.1 68414.m09493 expressed protein
Length = 497
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Frame = +3
Query: 177 DISLSDYKGKYV--VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDS 335
D+ ++G+ + +LFFYP D TF +I SE F ++ CEV+ A S
Sbjct: 19 DLRRGQHEGQELDKILFFYPPDLTFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHS 78
Query: 336 H 338
H
Sbjct: 79 H 79
>At3g55120.1 68416.m06121 chalcone-flavanone isomerase / chalcone
isomerase (CHI) identical to SP|P41088
Length = 246
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -3
Query: 631 GLQLAGHTSPCLSVNWKACTSRRVSSTDLPTGRSLIVICLRFCLSSMMKSPRKGMPVSSS 452
G+ L G+ P LSV WK T+ ++ + +P R ++ + MK P G S
Sbjct: 62 GVYLEGNAVPSLSVKWKGKTTEELTES-IPFFREIVTGAFEKFIKVTMKLPLTGQQYSEK 120
Query: 451 ST 446
T
Sbjct: 121 VT 122
>At1g16020.2 68414.m01922 expressed protein
Length = 502
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +3
Query: 213 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 338
+LFFYP D F +I SE F ++ CEV+ A SH
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77
>At1g16020.1 68414.m01921 expressed protein
Length = 515
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +3
Query: 213 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVLGASTDSH 338
+LFFYP D F +I SE F ++ CEV+ A SH
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSH 77
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 590 HGQARRGVPRQLEARRQDHQARHQGRPGVLRRRQLXTTPHQQ 715
H Q ++ +Q + ++Q Q +HQ +P +++Q T HQQ
Sbjct: 134 HHQQQQQQQQQQQQQQQQQQQQHQNQPPSQQQQQQSTPQHQQ 175
>At3g57570.1 68416.m06410 expressed protein
Length = 1057
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -3
Query: 631 GLQLAGHTSPCLSVNWKACTSRRVSSTDLPTGRSLIVICLRFCLSSMMKSPRKGMPVSSS 452
G + +T CL + C+S STD+ T + + I R C+++++ S + P SS
Sbjct: 875 GYSVLDYTIHCLIEDRSNCSSIPKLSTDILTCENPLPIPFRLCMANVIISACQKNPESSK 934
Query: 451 ST 446
T
Sbjct: 935 KT 936
>At3g62170.1 68416.m06985 pectinesterase family protein contains
Pfam profiles: PF01095 pectinesterase, PF04043 plant
invertase/pectin methylesterase inhibitor ;similar to
pollen-specific pectin esterase GI:1620652 from
[Brassica rapa subsp. pekinensis]
Length = 588
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 212 NIFPLVVRQRNVLELSVDDGRGLELGSGFGHLQRHLVETKD 90
+IF VV + + VDD + + +G+G G R L+E D
Sbjct: 192 DIFHSVVTAMAQMGVKVDDMKNITMGAGAGGAARRLLEDND 232
>At4g16146.1 68417.m02449 expressed protein
Length = 102
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 372 KQGGLGPMNIPLISDKSHRI---SRDYGVLDEETGIPFRGLFIID 497
K GGL P PLIS S R S D+ +L +E I R + I+
Sbjct: 25 KYGGLVPKKKPLISKDSKRAFFDSADWALLKQEASIDQRTIAAIE 69
>At2g32410.1 68415.m03960 auxin-resistance protein, putative strong
similarity to SP|P42744 Auxin-resistance protein AXR1
{Arabidopsis thaliana}; contains Pfam profile PF00899:
ThiF family
Length = 523
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 14 SRSDCHFYFKSESFSGAFGFRLLFKSL 94
S ++ H Y E++SGA GF +L +++
Sbjct: 394 STTELHKYLADENYSGAIGFYILLRAV 420
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,457,531
Number of Sequences: 28952
Number of extensions: 284223
Number of successful extensions: 1070
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1843581600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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