Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_I03
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 28 5.6
L25599-1|AAA28053.1| 343|Caenorhabditis elegans Hypothetical pr... 28 5.6
AC024859-1|ABA00161.2| 443|Caenorhabditis elegans Hypothetical ... 28 5.6
Z68131-1|CAA92217.1| 467|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z99281-53|CAB16519.2| 677|Caenorhabditis elegans Hypothetical p... 27 9.8
U00036-8|AAL06052.1| 318|Caenorhabditis elegans Hypothetical pr... 27 9.8
U00036-7|AAK29858.2| 319|Caenorhabditis elegans Hypothetical pr... 27 9.8
U00036-6|AAK29853.1| 377|Caenorhabditis elegans Hypothetical pr... 27 9.8
U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin prote... 27 9.8
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 577 KKIEHHEK-SHPDPPCHEVKNEQLKVETKTEHS 672
KKIE K +H +P E KNE+ ETK E S
Sbjct: 614 KKIEKTNKVNHDEPKKEEKKNEEQVKETKLESS 646
>L25599-1|AAA28053.1| 343|Caenorhabditis elegans Hypothetical
protein F54H12.4 protein.
Length = 343
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 574 EKKIEHHEKSHPDPPCHEVKNEQL 645
EK+ + EK + +PP ++ +NEQL
Sbjct: 96 EKRESYQEKDYTNPPVYKAENEQL 119
>AC024859-1|ABA00161.2| 443|Caenorhabditis elegans Hypothetical
protein Y71H2AM.9 protein.
Length = 443
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 583 IEHHEKS-HPDPPCHEVKNEQLKVETKTEHSESHHAPIV 696
+ HH KS H EV ++ LKV TE E+H P+V
Sbjct: 97 LTHHGKSNHQLYTLTEVYHKALKVHGSTEALEAHRRPLV 135
>Z68131-1|CAA92217.1| 467|Caenorhabditis elegans Hypothetical
protein B0395.2 protein.
Length = 467
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 369 VLFICDNYWNTGLICYYICSGRGY*LPRIYTGRSTWRD*IWY 244
V F C ++ + Y+I G + + R+ T RS W +W+
Sbjct: 381 VAFRC--FYPVMFVLYFIFGGTFFAVSRLITNRSAWNTALWF 420
>Z99281-53|CAB16519.2| 677|Caenorhabditis elegans Hypothetical
protein Y57G11C.18 protein.
Length = 677
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 574 EKKIEHHEKSHPDPPCHEVKNEQLKVETKTEHSE 675
EK+ + EK + PP ++ +NEQL + T H++
Sbjct: 430 EKRESYQEKYYESPPVYKAENEQL-FDDVTYHND 462
>U00036-8|AAL06052.1| 318|Caenorhabditis elegans Hypothetical
protein R151.2c protein.
Length = 318
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 244 LLILXGAADIWASCDPATAIDGAPYCKYSTGTTSRPPCTNTL 119
LLI+ A I +SC A I PY + SR P + L
Sbjct: 69 LLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKL 110
>U00036-7|AAK29858.2| 319|Caenorhabditis elegans Hypothetical
protein R151.2b protein.
Length = 319
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 244 LLILXGAADIWASCDPATAIDGAPYCKYSTGTTSRPPCTNTL 119
LLI+ A I +SC A I PY + SR P + L
Sbjct: 70 LLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKL 111
>U00036-6|AAK29853.1| 377|Caenorhabditis elegans Hypothetical
protein R151.2a protein.
Length = 377
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 244 LLILXGAADIWASCDPATAIDGAPYCKYSTGTTSRPPCTNTL 119
LLI+ A I +SC A I PY + SR P + L
Sbjct: 128 LLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKL 169
>U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical
protein R151.2d protein.
Length = 446
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 244 LLILXGAADIWASCDPATAIDGAPYCKYSTGTTSRPPCTNTL 119
LLI+ A I +SC A I PY + SR P + L
Sbjct: 197 LLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKL 238
>AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin protein
4 protein.
Length = 554
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 601 IFRDALFSFLRLQARTF*QPR*TLSDHQLRILLHEYNHQVE 479
+ RD LF +++ F PR TL D ++R+L + H V+
Sbjct: 270 VLRDLLFGRTWIESGNF--PRVTLCDFEVRVLGNNQRHSVQ 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,817,986
Number of Sequences: 27780
Number of extensions: 290304
Number of successful extensions: 818
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -