Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_I02
         (629 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    25   2.0  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   4.6  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   4.6  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   4.6  
AY331407-1|AAQ97588.1|  101|Anopheles gambiae agCP14332 protein.       24   4.6  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    23   8.0  

>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
 Frame = +3

Query: 354 VRWDSGIISAGREGEAIPFISWSDPEPFPVY----YVGVCTGWGATGSWKIEDGAEFDTP 521
           VRW S       +    P   W +  PF        +G    +G  G +K  DG  +D  
Sbjct: 19  VRWRSATAQPAADTSVDP--EWENALPFEKIPAPSLIGFLKEFGPFGKYK--DGNLYDIN 74

Query: 522 DRLEYKFGPV 551
            RL   +GP+
Sbjct: 75  KRLRELYGPI 84


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 313 LSISTLSGLVLFFLMTLLAFPQPPIITSYIG 221
           LSIS L  L +FFL+ +   P   ++   +G
Sbjct: 277 LSISILISLHVFFLLVVEIIPPTSLVVPLLG 307


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 313 LSISTLSGLVLFFLMTLLAFPQPPIITSYIG 221
           LSIS L  L +FFL+ +   P   ++   +G
Sbjct: 277 LSISILISLHVFFLLVVEIIPPTSLVVPLLG 307


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 313 LSISTLSGLVLFFLMTLLAFPQPPIITSYIG 221
           LSIS L  L +FFL+     P   ++   +G
Sbjct: 273 LSISILLSLTVFFLLLAEIIPPTSLVVPLLG 303


>AY331407-1|AAQ97588.1|  101|Anopheles gambiae agCP14332 protein.
          Length = 101

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 182 CPRRAHDRPARIGSYV*GDDWRLGKR 259
           C RR    PAR    +  D WR+G R
Sbjct: 11  CTRRNRTAPARNYDTIPIDRWRVGNR 36


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 503 SIFDFPGACGTPACADSDVVNWERF 429
           S + + G+  TPACA+S  V W  F
Sbjct: 208 SFYRYEGSLTTPACAES--VIWTVF 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,097
Number of Sequences: 2352
Number of extensions: 14098
Number of successful extensions: 133
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)