Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_H24
(670 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD... 360 1e-99
AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA... 360 1e-99
AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p pro... 261 5e-70
AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB... 261 5e-70
X69677-1|CAB41492.1| 197|Drosophila melanogaster ribosomal prot... 175 3e-44
AY071534-1|AAL49156.1| 181|Drosophila melanogaster RE57564p pro... 50 4e-06
AE013599-2494|AAF57847.2| 181|Drosophila melanogaster CG4866-PA... 50 4e-06
AY069804-1|AAL39949.1| 2555|Drosophila melanogaster SD04476p pro... 29 4.3
AY069336-1|AAL39481.1| 258|Drosophila melanogaster LD05259p pro... 29 4.3
AF032870-1|AAC38820.1| 2559|Drosophila melanogaster Shar pei/DRh... 29 4.3
AF031930-1|AAB88816.1| 2559|Drosophila melanogaster putative gua... 29 4.3
AE014297-401|AAF51920.1| 258|Drosophila melanogaster CG10287-PA... 29 4.3
AE013599-2403|AAM68490.2| 2559|Drosophila melanogaster CG9635-PF... 29 4.3
AE013599-2402|AAM68489.1| 2559|Drosophila melanogaster CG9635-PD... 29 4.3
AF070734-1|AAD09748.1| 218|Drosophila melanogaster Gasp precurs... 29 5.7
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 29 5.7
AY051610-1|AAK93034.1| 396|Drosophila melanogaster GH25564p pro... 29 7.6
AE014297-1520|AAF54812.1| 396|Drosophila melanogaster CG5641-PA... 29 7.6
AE014296-1104|AAF50670.1| 1320|Drosophila melanogaster CG10226-P... 29 7.6
AY058781-1|AAL14010.1| 585|Drosophila melanogaster SD07191p pro... 28 10.0
AE014296-3712|AAF51856.1| 585|Drosophila melanogaster CG11238-P... 28 10.0
>AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD,
isoform D protein.
Length = 195
Score = 360 bits (885), Expect = 1e-99
Identities = 174/195 (89%), Positives = 184/195 (94%), Gaps = 1/195 (0%)
Frame = +2
Query: 59 MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 238
MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1 MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60
Query: 239 LLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 418
LLTL+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61 LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120
Query: 419 AKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLR 598
AKSIHHAR+LIRQRHIRVRKQVVNIPSF+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL+
Sbjct: 121 AKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLK 180
Query: 599 KGQ-GGGAANDEXED 640
K Q GGG A +E ED
Sbjct: 181 KNQGGGGGAAEEEED 195
>AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA,
isoform A protein.
Length = 195
Score = 360 bits (885), Expect = 1e-99
Identities = 174/195 (89%), Positives = 184/195 (94%), Gaps = 1/195 (0%)
Frame = +2
Query: 59 MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 238
MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1 MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60
Query: 239 LLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 418
LLTL+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61 LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120
Query: 419 AKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLR 598
AKSIHHAR+LIRQRHIRVRKQVVNIPSF+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL+
Sbjct: 121 AKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLK 180
Query: 599 KGQ-GGGAANDEXED 640
K Q GGG A +E ED
Sbjct: 181 KNQGGGGGAAEEEED 195
>AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p
protein.
Length = 137
Score = 261 bits (640), Expect = 5e-70
Identities = 125/137 (91%), Positives = 132/137 (96%)
Frame = +2
Query: 59 MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 238
MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1 MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60
Query: 239 LLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 418
LLTL+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61 LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120
Query: 419 AKSIHHARILIRQRHIR 469
AKSIHHAR+LIRQRHIR
Sbjct: 121 AKSIHHARVLIRQRHIR 137
>AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB,
isoform B protein.
Length = 137
Score = 261 bits (640), Expect = 5e-70
Identities = 125/137 (91%), Positives = 132/137 (96%)
Frame = +2
Query: 59 MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 238
MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1 MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60
Query: 239 LLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 418
LLTL+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61 LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120
Query: 419 AKSIHHARILIRQRHIR 469
AKSIHHAR+LIRQRHIR
Sbjct: 121 AKSIHHARVLIRQRHIR 137
>X69677-1|CAB41492.1| 197|Drosophila melanogaster ribosomal protein
protein.
Length = 197
Score = 175 bits (427), Expect = 3e-44
Identities = 101/178 (56%), Positives = 122/178 (68%), Gaps = 1/178 (0%)
Frame = +2
Query: 59 MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 238
MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGL+ R V VKY LA+IRK ARE
Sbjct: 1 MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLQQARSV-AVKYALAKIRKVARE 59
Query: 239 LLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 418
LLTL+EKD KRLF+G +L+RRLVRIGVL + + G + L +AGL
Sbjct: 60 LLTLDEKDAKRLFQGKSLVRRLVRIGVL-KSPHEARLRAGSEDSGLLGASSADAGVQAGL 118
Query: 419 AKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHI-DFSLKSPFGGGRPGRVKRK 589
AKSIHHAR+LIRQR + + IPSF+V + +FSLK P RP R +++
Sbjct: 119 AKSIHHARVLIRQRTFVLASRWSTIPSFVVTPGLPEATSNFSLKMPL-RTRPSRSRQE 175
>AY071534-1|AAL49156.1| 181|Drosophila melanogaster RE57564p
protein.
Length = 181
Score = 49.6 bits (113), Expect = 4e-06
Identities = 29/123 (23%), Positives = 60/123 (48%)
Frame = +2
Query: 140 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGV 319
+E KI+ + ++ + + + IR+ A + L+ +P + LL +L +GV
Sbjct: 28 KENKILRRFHIQKREDYTKYNKLSREIRELAERIAKLDASEPFKTEATTMLLNKLHAMGV 87
Query: 320 LDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPS 499
++ Q+ L+ + F RRL + K +++ + A LI H+RV +++ P+
Sbjct: 88 SND-QLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVRVGPEMIKDPA 146
Query: 500 FIV 508
F+V
Sbjct: 147 FLV 149
>AE013599-2494|AAF57847.2| 181|Drosophila melanogaster CG4866-PA
protein.
Length = 181
Score = 49.6 bits (113), Expect = 4e-06
Identities = 29/123 (23%), Positives = 60/123 (48%)
Frame = +2
Query: 140 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGV 319
+E KI+ + ++ + + + IR+ A + L+ +P + LL +L +GV
Sbjct: 28 KENKILRRFHIQKREDYTKYNKLSREIRELAERIAKLDASEPFKTEATTMLLNKLHAMGV 87
Query: 320 LDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPS 499
++ Q+ L+ + F RRL + K +++ + A LI H+RV +++ P+
Sbjct: 88 SND-QLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVRVGPEMIKDPA 146
Query: 500 FIV 508
F+V
Sbjct: 147 FLV 149
>AY069804-1|AAL39949.1| 2555|Drosophila melanogaster SD04476p
protein.
Length = 2555
Score = 29.5 bits (63), Expect = 4.3
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Frame = +2
Query: 8 PMLF*FLSASSACELAKMVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGL----R 175
P + + AS+ ELA + ++ S + VTP P R D+ I G + R
Sbjct: 312 PTVVGLIKASTTVELAVKRSQKLTRPSSVSVVTPSTPILSGR-DRTASITGPQPVDSIKR 370
Query: 176 NKREVWRVKYTLARI---RKAARELLTLEEKDPK-RLFEGN--ALLRRLVRIGVLDEKQM 337
+ E ++++ TL ++ K E L ++ +P +L E N L +L ++G D +
Sbjct: 371 REMETYKIQ-TLQKMLEQEKLNLERLKSDQNNPSYKLSEANIRKLREQLHQVGAEDAPTV 429
Query: 338 KLDYVLGLK 364
KL G K
Sbjct: 430 KLQAAAGNK 438
>AY069336-1|AAL39481.1| 258|Drosophila melanogaster LD05259p
protein.
Length = 258
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 382 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQA 480
A DA V W +V P C+N + A +SCP A
Sbjct: 127 AYDRDARVCMWADQV-PECKNEEVANGFSCPAA 158
>AF032870-1|AAC38820.1| 2559|Drosophila melanogaster Shar
pei/DRhoGEF2 protein.
Length = 2559
Score = 29.5 bits (63), Expect = 4.3
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Frame = +2
Query: 8 PMLF*FLSASSACELAKMVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGL----R 175
P + + AS+ ELA + ++ S + VTP P R D+ I G + R
Sbjct: 316 PTVVGLIKASTTVELAVKRSQKLTRPSSVSVVTPSTPILSGR-DRTASITGPQPVDSIKR 374
Query: 176 NKREVWRVKYTLARI---RKAARELLTLEEKDPK-RLFEGN--ALLRRLVRIGVLDEKQM 337
+ E ++++ TL ++ K E L ++ +P +L E N L +L ++G D +
Sbjct: 375 REMETYKIQ-TLQKMLEQEKLNLERLKSDQNNPSYKLSEANIRKLREQLHQVGAEDAPTV 433
Query: 338 KLDYVLGLK 364
KL G K
Sbjct: 434 KLQAAAGNK 442
>AF031930-1|AAB88816.1| 2559|Drosophila melanogaster putative
guanine nucleotide exchangefactor RhoGEF2 protein.
Length = 2559
Score = 29.5 bits (63), Expect = 4.3
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Frame = +2
Query: 8 PMLF*FLSASSACELAKMVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGL----R 175
P + + AS+ ELA + ++ S + VTP P R D+ I G + R
Sbjct: 316 PTVVGLIKASTTVELAVKRSQKLTRPSSVSVVTPSTPILSGR-DRTASITGPQPVDSIKR 374
Query: 176 NKREVWRVKYTLARI---RKAARELLTLEEKDPK-RLFEGN--ALLRRLVRIGVLDEKQM 337
+ E ++++ TL ++ K E L ++ +P +L E N L +L ++G D +
Sbjct: 375 REMETYKIQ-TLQKMLEQEKLNLERLKSDQNNPSYKLSEANIRKLREQLHQVGAEDAPTV 433
Query: 338 KLDYVLGLK 364
KL G K
Sbjct: 434 KLQAAAGNK 442
>AE014297-401|AAF51920.1| 258|Drosophila melanogaster CG10287-PA
protein.
Length = 258
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 382 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQA 480
A DA V W +V P C+N + A +SCP A
Sbjct: 127 AYDRDARVCMWADQV-PECKNEEVANGFSCPAA 158
>AE013599-2403|AAM68490.2| 2559|Drosophila melanogaster CG9635-PF,
isoform F protein.
Length = 2559
Score = 29.5 bits (63), Expect = 4.3
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Frame = +2
Query: 8 PMLF*FLSASSACELAKMVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGL----R 175
P + + AS+ ELA + ++ S + VTP P R D+ I G + R
Sbjct: 316 PTVVGLIKASTTVELAVKRSQKLTRPSSVSVVTPSTPILSGR-DRTASITGPQPVDSIKR 374
Query: 176 NKREVWRVKYTLARI---RKAARELLTLEEKDPK-RLFEGN--ALLRRLVRIGVLDEKQM 337
+ E ++++ TL ++ K E L ++ +P +L E N L +L ++G D +
Sbjct: 375 REMETYKIQ-TLQKMLEQEKLNLERLKSDQNNPSYKLSEANIRKLREQLHQVGAEDAPTV 433
Query: 338 KLDYVLGLK 364
KL G K
Sbjct: 434 KLQAAAGNK 442
>AE013599-2402|AAM68489.1| 2559|Drosophila melanogaster CG9635-PD,
isoform D protein.
Length = 2559
Score = 29.5 bits (63), Expect = 4.3
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Frame = +2
Query: 8 PMLF*FLSASSACELAKMVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGL----R 175
P + + AS+ ELA + ++ S + VTP P R D+ I G + R
Sbjct: 316 PTVVGLIKASTTVELAVKRSQKLTRPSSVSVVTPSTPILSGR-DRTASITGPQPVDSIKR 374
Query: 176 NKREVWRVKYTLARI---RKAARELLTLEEKDPK-RLFEGN--ALLRRLVRIGVLDEKQM 337
+ E ++++ TL ++ K E L ++ +P +L E N L +L ++G D +
Sbjct: 375 REMETYKIQ-TLQKMLEQEKLNLERLKSDQNNPSYKLSEANIRKLREQLHQVGAEDAPTV 433
Query: 338 KLDYVLGLK 364
KL G K
Sbjct: 434 KLQAAAGNK 442
>AF070734-1|AAD09748.1| 218|Drosophila melanogaster Gasp precursor
protein.
Length = 218
Score = 29.1 bits (62), Expect = 5.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 394 DAGVQSWPGEVHPSCQNFDPAKAYSCPQA 480
DA V W +V P C+N + A +SCP A
Sbjct: 131 DARVCMWADQV-PECKNEEVANGFSCPAA 158
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -1
Query: 481 LLADTNMPLPDQNSGMMDGLRQASFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSN 311
LL + PLP NSG + +QA H + V N + K +++ L +Q+ +
Sbjct: 1095 LLMRLSQPLPASNSGRANLFQQAVPHHKDVHPKASSVYNPRIKEVLQVLLQALQFKH 1151
>AY051610-1|AAK93034.1| 396|Drosophila melanogaster GH25564p
protein.
Length = 396
Score = 28.7 bits (61), Expect = 7.6
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +2
Query: 272 LFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS--IHHARI 445
+ GN + +V + L K+ +D L K+E L+ ++T+V G + IH
Sbjct: 114 ILTGNNVADVVVILKTLPTKEA-VD-ALAKKVEADLKASMKTEVLTKGDQHTVQIHERGF 171
Query: 446 LIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSL 544
I H +VR + +P + +L+ H+D L
Sbjct: 172 DIANVHAKVRILIATLPQNLRKLEPEIHLDHKL 204
>AE014297-1520|AAF54812.1| 396|Drosophila melanogaster CG5641-PA
protein.
Length = 396
Score = 28.7 bits (61), Expect = 7.6
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +2
Query: 272 LFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS--IHHARI 445
+ GN + +V + L K+ +D L K+E L+ ++T+V G + IH
Sbjct: 114 ILTGNNVADVVVILKTLPTKEA-VD-ALAKKVEADLKASMKTEVLTKGDQHTVQIHERGF 171
Query: 446 LIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSL 544
I H +VR + +P + +L+ H+D L
Sbjct: 172 DIANVHAKVRILIATLPQNLRKLEPEIHLDHKL 204
>AE014296-1104|AAF50670.1| 1320|Drosophila melanogaster CG10226-PA
protein.
Length = 1320
Score = 28.7 bits (61), Expect = 7.6
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 401 VFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS-PFGGGRPGR 577
+F+ + ++I H + Q+ + + N FI+ L G D S K GG+ R
Sbjct: 501 LFQGSIGENIRHGKPEATQKEVEDAAKAANAHDFIIALHKGYDTDISEKGVQLSGGQRQR 560
Query: 578 V 580
+
Sbjct: 561 I 561
>AY058781-1|AAL14010.1| 585|Drosophila melanogaster SD07191p
protein.
Length = 585
Score = 28.3 bits (60), Expect = 10.0
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -1
Query: 406 EHLRLQTTLQEV---LNLQTKHIIEFHLFFIQYSNTNQ 302
E+ RLQ LQE LNLQT+ EF +Q S T++
Sbjct: 423 ENERLQRELQEARAELNLQTRRASEFEQQLLQLSETSR 460
>AE014296-3712|AAF51856.1| 585|Drosophila melanogaster CG11238-PA
protein.
Length = 585
Score = 28.3 bits (60), Expect = 10.0
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -1
Query: 406 EHLRLQTTLQEV---LNLQTKHIIEFHLFFIQYSNTNQ 302
E+ RLQ LQE LNLQT+ EF +Q S T++
Sbjct: 423 ENERLQRELQEARAELNLQTRRASEFEQQLLQLSETSR 460
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,227,716
Number of Sequences: 53049
Number of extensions: 667596
Number of successful extensions: 1931
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1928
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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