BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P02_F_H23 (657 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_1770 - 29382508-29382591,29382901-29383041,29383134-293835... 31 1.1 12_01_0314 - 2395113-2395760,2396151-2396738,2397218-2397252,239... 29 2.5 03_02_0691 + 10432615-10433109,10433155-10433216,10433526-104335... 29 2.5 01_05_0279 + 20318440-20318688,20318785-20318931,20319449-203196... 29 3.3 01_07_0189 + 41875088-41875149,41875322-41875392,41875809-418759... 28 5.7 10_01_0111 + 1384737-1386215 27 9.9 09_01_0155 - 2301903-2302151,2302334-2302491,2302651-2302819,230... 27 9.9 >07_03_1770 - 29382508-29382591,29382901-29383041,29383134-29383520, 29383685-29383930,29385396-29385437,29385973-29386461 Length = 462 Score = 30.7 bits (66), Expect = 1.1 Identities = 18/43 (41%), Positives = 21/43 (48%) Frame = +1 Query: 370 DRMEEEQRASRRGGRPQGAVRAPEQGAHLPDQGPQ*RGRLRQL 498 DR E A R GR Q + PE A LP+ P + RLR L Sbjct: 29 DRKFEPPAAPSRVGRKQRKQKGPEAAARLPNVAPLSKCRLRLL 71 >12_01_0314 - 2395113-2395760,2396151-2396738,2397218-2397252, 2397546-2397632,2397913-2397985,2398648-2398714, 2398795-2398931,2400196-2400217,2400733-2400807, 2402281-2402365,2402605-2403334 Length = 848 Score = 29.5 bits (63), Expect = 2.5 Identities = 15/60 (25%), Positives = 30/60 (50%) Frame = -1 Query: 390 LFFFHTISNESSGTARVQFKLNGRPTMYFKAS*LTSSWVGSVTGAIVDEFWALVRTPQAK 211 L HT+ ++ + T V F++ + +K+ + W+G G I D +W R+P+ + Sbjct: 343 LLLLHTMHSKVAATTHVSFRVVHFQDLVYKSFGEIAVWLGGQYG-IHDSWWDCGRSPKGR 401 >03_02_0691 + 10432615-10433109,10433155-10433216,10433526-10433565, 10434562-10434807,10435020-10435189,10435323-10435539, 10435615-10435755,10435943-10436026 Length = 484 Score = 29.5 bits (63), Expect = 2.5 Identities = 18/43 (41%), Positives = 20/43 (46%) Frame = +1 Query: 370 DRMEEEQRASRRGGRPQGAVRAPEQGAHLPDQGPQ*RGRLRQL 498 DR E A R GR Q + PE A LP P + RLR L Sbjct: 31 DRKFEPPAAPSRVGRKQRKQKGPEAAARLPAVAPLSKCRLRLL 73 >01_05_0279 + 20318440-20318688,20318785-20318931,20319449-20319611, 20319770-20319887,20320607-20320676,20320774-20320854, 20320924-20320959,20321129-20321149,20321586-20321642, 20321716-20321827,20321905-20322178,20322454-20322556, 20323244-20323459,20324615-20324665,20325339-20327963 Length = 1440 Score = 29.1 bits (62), Expect = 3.3 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Frame = +2 Query: 428 YELQNKGLTFQIKGRSNE------DDYGNYTCGLKNQTGHIKAW 541 Y + +GL F+I+ +E D +G +T +K + H+KAW Sbjct: 608 YVKKIRGLAFEIEDAVDEFTYKLEDKHGGFTAKMKKRIKHVKAW 651 >01_07_0189 + 41875088-41875149,41875322-41875392,41875809-41875902, 41876285-41876360,41877130-41877293,41877428-41877605, 41877687-41877809,41877895-41877990,41878091-41878372 Length = 381 Score = 28.3 bits (60), Expect = 5.7 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +1 Query: 343 SRRATGFV*DRMEEEQRASRRGGRPQGAVRAPEQGAHLPDQ 465 +RR G R++ +++GG PQG V E+ HL +Q Sbjct: 20 ARRICGMA-SRIDANDHGNQQGGNPQGPVGTAERLEHLLNQ 59 >10_01_0111 + 1384737-1386215 Length = 492 Score = 27.5 bits (58), Expect = 9.9 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = +2 Query: 227 LTSAQNSSTIAPVTEPTQELVNYEALKY--IVGRPFNLNCTLAVPLDSFEIVWK 382 +++ +N + + PV V+ AL + G P CT VP F+++WK Sbjct: 46 VSTPRNIARLPPVRPAAAARVDLVALPLPRVDGLPDGAECTNDVPSGKFDLLWK 99 >09_01_0155 - 2301903-2302151,2302334-2302491,2302651-2302819, 2303796-2304839,2305792-2306075,2306318-2307333, 2307937-2308085 Length = 1022 Score = 27.5 bits (58), Expect = 9.9 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +2 Query: 431 ELQNKGLTFQIKGRSNEDDYG 493 E+QN G TF + G S+ED+ G Sbjct: 194 EMQNDGATFLLDGGSSEDNLG 214 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,008,468 Number of Sequences: 37544 Number of extensions: 305322 Number of successful extensions: 796 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 780 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 796 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1644004708 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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