Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_H21
(744 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 80 4e-16
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb... 67 2e-12
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom... 52 9e-08
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 25 0.81
SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual 28 1.2
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 28 1.6
SPCC1281.07c |||glutathione S-transferase Gst3|Schizosaccharomyc... 28 1.6
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 27 2.8
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 27 3.7
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 27 3.7
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 79.8 bits (188), Expect = 4e-16
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 11/148 (7%)
Frame = +2
Query: 269 YPRVKLDARPNDSAGDPLMLTPFLKNESI---ALAQELSRV--SLTETLGIES---HAGF 424
+P +A+P DS+ + + E + A RV S E+LGI++ + G+
Sbjct: 533 HPAKPSNAQPADSSRPYAVFSQEENGEHVNLKAFPDHTLRVKDSKPESLGIDTVKQYTGY 592
Query: 425 FTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPLIASKDGFAKR 604
V++ + +++FW+F + E PV+LWL GGPG SSL GLF E+GP + + K
Sbjct: 593 LDVED--DRHLFFWFFESRNDPENDPVVLWLNGGPGCSSLTGLFMELGPSSINIETL-KP 649
Query: 605 EYH---WAKNYHLIFIDNPVGTGFSFTD 679
EY+ W N +IF+D P+ TGFS D
Sbjct: 650 EYNPHSWNSNASVIFLDQPINTGFSNGD 677
>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 510
Score = 67.3 bits (157), Expect = 2e-12
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +2
Query: 413 HAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPL-IASKD 589
HAG ++ + +++FW F + +LWL GGPG SS G EVGP + +
Sbjct: 46 HAGHLNQTDQLDGDLFFWMFESVKPEYEHRSILWLNGGPGCSSEDGSLMEVGPFRLDDNN 105
Query: 590 GFAKREYHWAKNYHLIFIDNPVGTGFSFT 676
F W + +L+F+D P+GTG+S++
Sbjct: 106 TFQLNPGRWDELGNLLFVDQPLGTGYSYS 134
>SPAC1296.03c |sxa2||serine carboxypeptidase
Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 52.0 bits (119), Expect = 9e-08
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = +2
Query: 407 ESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPLIASK 586
E ++G+ + + ++++ Y P + +E ++WLQGGPG + G F+E GP+ S+
Sbjct: 73 ELYSGYLEANS--DKSLFYTYAPAVVDSET--FIVWLQGGPGCAGTLGFFSENGPIEISQ 128
Query: 587 DGFAK--REYHWAKNYHLIFIDNPVGTGFS 670
+ W +++++D P GTG+S
Sbjct: 129 SSPSPSLNPESWTNFANMLWLDQPFGTGYS 158
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 24.6 bits (51), Expect(2) = 0.81
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 4/26 (15%)
Frame = -1
Query: 261 GNLAPFSG----NKVEKNKTHGTALS 196
G+L+P S N+V +N+THG+ +S
Sbjct: 279 GSLSPLSNSSSINQVHQNETHGSTIS 304
Score = 22.6 bits (46), Expect(2) = 0.81
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 444 NFSSTVKNPA*LSIPSVSVNDTL 376
+FSS + NPA ++ S +VN +L
Sbjct: 259 SFSSPLDNPALHTVDSTNVNGSL 281
>SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1339
Score = 28.3 bits (60), Expect = 1.2
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = -1
Query: 387 NDTLDSSWARAMDSFLRNGVSMRGSPAESLGRASSFTRG*TFGNLAPFSGNKVEKNKTHG 208
+D +W R F N VS+ E++ R + T TF N A E+N T
Sbjct: 978 SDVESETWIRGNSLFTIN-VSVNSGFLEAVIRRPTGTTQYTFRNEASLQKFLWEENLTSS 1036
Query: 207 TALSRGFHFTAIMTSK*F---EAISSYNQ 130
AL+RG T F IS YNQ
Sbjct: 1037 KALTRGLLCTPSSFVSHFLDPHGISLYNQ 1065
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 27.9 bits (59), Expect = 1.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 293 RPNDSAGDPLMLTPFLKNESIAL 361
+PN ++G PL +TPFL+ S ++
Sbjct: 263 QPNATSGSPLSVTPFLQKTSTSI 285
>SPCC1281.07c |||glutathione S-transferase Gst3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 313
Score = 27.9 bits (59), Expect = 1.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 293 RPNDSAGDPLMLTPFLKN 346
+ NDS GDPL +P+L+N
Sbjct: 86 KENDSTGDPLYNSPYLRN 103
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 27.1 bits (57), Expect = 2.8
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -1
Query: 561 SVKSPNKELAPG--PPCSHSKTGAASFFDKGGKYQKYI-FELN 442
+VKS E+ P PPC GA SF KY++ + F LN
Sbjct: 1202 NVKSEAPEIIPENRPPCEWPTDGAVSFNHYSAKYREDLSFALN 1244
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 560 EVGPLIASKDGFAKREYHWAKNYHLIFIDNPVGTGFSFTDK 682
E G ++ DG+ + Y K ++++FI + V TG + T K
Sbjct: 218 EAGVMVPD-DGYLEEAYKLCKAHNVLFIADEVQTGVARTGK 257
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +3
Query: 447 IQICTFGISRLYRR-TKLHRFC 509
I+I FG+S LYRR ++L FC
Sbjct: 280 IKIIDFGLSNLYRRQSRLRTFC 301
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,008,014
Number of Sequences: 5004
Number of extensions: 63396
Number of successful extensions: 194
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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