Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_H13
         (810 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           24   1.2  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.8  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.8  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = +3

Query: 558 IGQENADTKMVKLFEQCSIILSGDVHESLKSMV 656
           +GQ+N    +++   Q SII+SG + +  K+++
Sbjct: 12  LGQQNKMYNVIQHSPQQSIIVSGSITQPTKTVI 44


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = -2

Query: 458 MMVLSQHFYTLFNQYIHTFFHVYQLF--CGQFV 366
           ++  S   +  FN Y++ F H++  F  C  F+
Sbjct: 53  ILTSSVTLHVCFNSYMYAFTHIFFFFAICCDFI 85


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 113 VFVGINIIVLNTTYNKSVLTTYVRK*IMNFVLFSSAG 3
           VF  + + VLN  +  SV  +   + ++N +LF  AG
Sbjct: 334 VFTAMGLYVLNMEHFFSVKCSIQSESLLNDILFPVAG 370


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 319 NSFF*SQKYHSWKQKYTN 372
           + F+ + +YH+W+  Y N
Sbjct: 491 HGFWGTTEYHNWRVVYNN 508


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 21  HEIHNSLTNIC 53
           H +HN L N+C
Sbjct: 215 HGVHNELCNLC 225


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,037
Number of Sequences: 336
Number of extensions: 4118
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)