Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_H13
         (810 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   1.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   5.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   5.8  

>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = -2

Query: 440 HFYTLFNQYIHTFFHVYQLFCGQFVYFCFQLWYFWLQKKEF-IPKSRVISR*VLSSKERF 264
           H Y L N+ I   + +  +    + +F  Q + FWL  KE+ +P  R      L S +  
Sbjct: 212 HDYNLENKLI---YFIEDIGLNTYYFFLRQAFPFWLPSKEYDLPDYR--GEEYLYSHKLL 266

Query: 263 INLYNL 246
           +N Y L
Sbjct: 267 LNRYYL 272


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -1

Query: 795 NXAVAFL*WYKAAVSMAQTNSLT*NTPQKDSHLYFLFQLL 676
           N    FL WYK  + +++    T    ++   +  LF+LL
Sbjct: 76  NVVQKFLWWYKQGMFLSRNAIFTPLNSEQKYEVRMLFELL 115


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = -2

Query: 440 HFYTLFNQYIHTFFHVYQLFCGQFVYFCFQLWYFWLQKKEF-IPKSRVISR*VLSSKERF 264
           H Y L N+    +F +  +    + +F  Q + FWL  KE+ +P  R      L S +  
Sbjct: 212 HDYNLENKL--NYF-IEDIGLNTYYFFLRQAFPFWLPSKEYDLPDYR--GEEYLYSHKLL 266

Query: 263 INLYNL 246
           +N Y L
Sbjct: 267 LNRYYL 272


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -1

Query: 795 NXAVAFL*WYKAAVSMAQTNSLT*NTPQKDSHLYFLFQLL 676
           N    FL WYK  + +++    T    ++   +  LF+LL
Sbjct: 76  NVVQKFLWWYKQGMFLSRNAIFTPLNSEQKYEVRMLFELL 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,123
Number of Sequences: 438
Number of extensions: 4329
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)