Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_H06
(688 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D49914-1|BAA95602.1| 514|Homo sapiens Seryl tRNA Synthetase pro... 226 5e-59
BC111398-1|AAI11399.1| 511|Homo sapiens SARS protein protein. 226 5e-59
BC009390-1|AAH09390.1| 514|Homo sapiens seryl-tRNA synthetase p... 226 5e-59
BC000716-1|AAH00716.1| 514|Homo sapiens seryl-tRNA synthetase p... 226 5e-59
AL356389-5|CAI13600.1| 536|Homo sapiens seryl-tRNA synthetase p... 226 5e-59
AL356389-4|CAI13599.1| 514|Homo sapiens seryl-tRNA synthetase p... 226 5e-59
AK222677-1|BAD96397.1| 514|Homo sapiens seryl-tRNA synthetase v... 226 5e-59
X91257-1|CAA62635.1| 514|Homo sapiens seryl-tRNA synthetase pro... 224 2e-58
AF275150-1|AAF91411.1| 1115|Homo sapiens transmembrane-type prot... 32 2.2
U92715-1|AAC39777.1| 825|Homo sapiens breast cancer antiestroge... 31 2.9
M20470-1|AAA59506.1| 211|Homo sapiens CLTB protein. 31 2.9
CR536577-1|CAG38814.1| 211|Homo sapiens CLTB protein. 31 2.9
BT007028-1|AAP35675.1| 211|Homo sapiens clathrin, light polypep... 31 2.9
BC039895-1|AAH39895.1| 825|Homo sapiens breast cancer anti-estr... 31 2.9
BC006457-1|AAH06457.1| 211|Homo sapiens clathrin, light chain (... 31 2.9
BC006332-1|AAH06332.1| 211|Homo sapiens clathrin, light chain (... 31 2.9
AL359820-1|CAH73975.1| 825|Homo sapiens breast cancer anti-estr... 31 2.9
AL109613-1|CAI18950.1| 825|Homo sapiens breast cancer anti-estr... 31 2.9
AF124250-1|AAD28245.1| 825|Homo sapiens SH2-containing protein ... 31 2.9
BC142709-1|AAI42710.1| 857|Homo sapiens AASDH protein protein. 31 3.8
BC141824-1|AAI41825.1| 841|Homo sapiens AASDH protein protein. 31 3.8
AY422212-1|AAR31184.1| 1098|Homo sapiens putative non-ribosomal ... 31 3.8
AY314787-1|AAQ83120.1| 1098|Homo sapiens 2-aminoadipic 6-semiald... 31 3.8
AL391380-1|CAI40723.1| 861|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 31 3.8
AL357834-1|CAI40867.1| 861|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 31 3.8
AK123209-1|BAC85559.1| 308|Homo sapiens protein ( Homo sapiens ... 31 3.8
AF516672-1|AAP76519.1| 998|Homo sapiens putative non-ribosomal ... 31 3.8
D15049-1|BAA03645.2| 1117|Homo sapiens protein tyrosine phosphat... 30 6.7
BC146797-1|AAI46798.1| 754|Homo sapiens nibrin protein. 30 6.7
BC111716-1|AAI11717.1| 1115|Homo sapiens protein tyrosine phosph... 30 6.7
BC111715-1|AAI11716.1| 937|Homo sapiens PTPRH protein protein. 30 6.7
AY598321-1|AAT06732.1| 644|Homo sapiens L2 protein. 30 6.7
AY566246-1|AAS59158.1| 754|Homo sapiens Nijmegen breakage syndr... 30 6.7
AK223256-1|BAD96976.1| 754|Homo sapiens nibrin variant protein. 30 6.7
AK127271-1|BAC86910.1| 1091|Homo sapiens protein ( Homo sapiens ... 30 6.7
AF069291-2|AAC62232.1| 754|Homo sapiens nibrin protein. 30 6.7
AF058696-1|AAC39752.1| 754|Homo sapiens cell cycle regulatory p... 30 6.7
AF051334-1|AAC39732.1| 754|Homo sapiens nibrin protein. 30 6.7
AB046791-1|BAB13397.2| 1779|Homo sapiens KIAA1571 protein protein. 30 6.7
AB023214-1|BAA76841.2| 646|Homo sapiens KIAA0997 protein protein. 30 6.7
AB013139-1|BAA28616.1| 754|Homo sapiens NBS1 protein. 30 6.7
BC104899-1|AAI04900.1| 825|Homo sapiens leucine-rich repeats an... 30 8.9
BC104897-1|AAI04898.1| 825|Homo sapiens leucine-rich repeats an... 30 8.9
AK057348-1|BAB71441.1| 825|Homo sapiens protein ( Homo sapiens ... 30 8.9
>D49914-1|BAA95602.1| 514|Homo sapiens Seryl tRNA Synthetase
protein.
Length = 514
Score = 226 bits (553), Expect = 5e-59
Identities = 116/198 (58%), Positives = 139/198 (70%), Gaps = 1/198 (0%)
Frame = +2
Query: 98 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVC 277
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN NKLKN+C
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 278 SKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKND 457
SK IG KMK KEP G +DE VP + + +LT D L L V+QIKKVR+LID AI K D
Sbjct: 61 SKTIGEKMKKKEPVG-DDESVPENVL-SFDDLTADALANLKVSQIKKVRLLIDEAILKCD 118
Query: 458 EGLLAAEKARSAALREVGNHLHESVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMID 634
+ E R LRE+GN LH SVP+ +DED N VER GDC RKKYSHVDL+ M+D
Sbjct: 119 AERIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVD 178
Query: 635 GMDGERGSAVXGGRGYYL 688
G +GE+G+ V G RGY+L
Sbjct: 179 GFEGEKGAVVAGSRGYFL 196
>BC111398-1|AAI11399.1| 511|Homo sapiens SARS protein protein.
Length = 511
Score = 226 bits (553), Expect = 5e-59
Identities = 116/198 (58%), Positives = 139/198 (70%), Gaps = 1/198 (0%)
Frame = +2
Query: 98 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVC 277
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN NKLKN+C
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 278 SKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKND 457
SK IG KMK KEP G +DE VP + + +LT D L L V+QIKKVR+LID AI K D
Sbjct: 61 SKTIGEKMKKKEPVG-DDESVPENVL-SFDDLTADALANLKVSQIKKVRLLIDEAILKCD 118
Query: 458 EGLLAAEKARSAALREVGNHLHESVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMID 634
+ E R LRE+GN LH SVP+ +DED N VER GDC RKKYSHVDL+ M+D
Sbjct: 119 AERIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVD 178
Query: 635 GMDGERGSAVXGGRGYYL 688
G +GE+G+ V G RGY+L
Sbjct: 179 GFEGEKGAVVAGSRGYFL 196
>BC009390-1|AAH09390.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 226 bits (553), Expect = 5e-59
Identities = 116/198 (58%), Positives = 139/198 (70%), Gaps = 1/198 (0%)
Frame = +2
Query: 98 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVC 277
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN NKLKN+C
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 278 SKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKND 457
SK IG KMK KEP G +DE VP + + +LT D L L V+QIKKVR+LID AI K D
Sbjct: 61 SKTIGEKMKKKEPVG-DDESVPENVL-SFDDLTADALANLKVSQIKKVRLLIDEAILKCD 118
Query: 458 EGLLAAEKARSAALREVGNHLHESVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMID 634
+ E R LRE+GN LH SVP+ +DED N VER GDC RKKYSHVDL+ M+D
Sbjct: 119 AERIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVD 178
Query: 635 GMDGERGSAVXGGRGYYL 688
G +GE+G+ V G RGY+L
Sbjct: 179 GFEGEKGAVVAGSRGYFL 196
>BC000716-1|AAH00716.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 226 bits (553), Expect = 5e-59
Identities = 116/198 (58%), Positives = 139/198 (70%), Gaps = 1/198 (0%)
Frame = +2
Query: 98 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVC 277
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN NKLKN+C
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 278 SKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKND 457
SK IG KMK KEP G +DE VP + + +LT D L L V+QIKKVR+LID AI K D
Sbjct: 61 SKTIGEKMKKKEPVG-DDESVPENVL-SFDDLTADALANLKVSQIKKVRLLIDEAILKCD 118
Query: 458 EGLLAAEKARSAALREVGNHLHESVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMID 634
+ E R LRE+GN LH SVP+ +DED N VER GDC RKKYSHVDL+ M+D
Sbjct: 119 AERIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVD 178
Query: 635 GMDGERGSAVXGGRGYYL 688
G +GE+G+ V G RGY+L
Sbjct: 179 GFEGEKGAVVAGSRGYFL 196
>AL356389-5|CAI13600.1| 536|Homo sapiens seryl-tRNA synthetase
protein.
Length = 536
Score = 226 bits (553), Expect = 5e-59
Identities = 116/198 (58%), Positives = 139/198 (70%), Gaps = 1/198 (0%)
Frame = +2
Query: 98 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVC 277
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN NKLKN+C
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 278 SKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKND 457
SK IG KMK KEP G +DE VP + + +LT D L L V+QIKKVR+LID AI K D
Sbjct: 61 SKTIGEKMKKKEPVG-DDESVPENVL-SFDDLTADALANLKVSQIKKVRLLIDEAILKCD 118
Query: 458 EGLLAAEKARSAALREVGNHLHESVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMID 634
+ E R LRE+GN LH SVP+ +DED N VER GDC RKKYSHVDL+ M+D
Sbjct: 119 AERIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVD 178
Query: 635 GMDGERGSAVXGGRGYYL 688
G +GE+G+ V G RGY+L
Sbjct: 179 GFEGEKGAVVAGSRGYFL 196
>AL356389-4|CAI13599.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 226 bits (553), Expect = 5e-59
Identities = 116/198 (58%), Positives = 139/198 (70%), Gaps = 1/198 (0%)
Frame = +2
Query: 98 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVC 277
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN NKLKN+C
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 278 SKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKND 457
SK IG KMK KEP G +DE VP + + +LT D L L V+QIKKVR+LID AI K D
Sbjct: 61 SKTIGEKMKKKEPVG-DDESVPENVL-SFDDLTADALANLKVSQIKKVRLLIDEAILKCD 118
Query: 458 EGLLAAEKARSAALREVGNHLHESVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMID 634
+ E R LRE+GN LH SVP+ +DED N VER GDC RKKYSHVDL+ M+D
Sbjct: 119 AERIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVD 178
Query: 635 GMDGERGSAVXGGRGYYL 688
G +GE+G+ V G RGY+L
Sbjct: 179 GFEGEKGAVVAGSRGYFL 196
>AK222677-1|BAD96397.1| 514|Homo sapiens seryl-tRNA synthetase
variant protein.
Length = 514
Score = 226 bits (553), Expect = 5e-59
Identities = 116/198 (58%), Positives = 139/198 (70%), Gaps = 1/198 (0%)
Frame = +2
Query: 98 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVC 277
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN NKLKN+C
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC 60
Query: 278 SKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKND 457
SK IG KMK KEP G +DE VP + + +LT D L L V+QIKKVR+LID AI K D
Sbjct: 61 SKTIGEKMKKKEPVG-DDESVPENVL-SFDDLTADALANLKVSQIKKVRLLIDEAILKCD 118
Query: 458 EGLLAAEKARSAALREVGNHLHESVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMID 634
+ E R LRE+GN LH SVP+ +DED N VER GDC RKKYSHVDL+ M+D
Sbjct: 119 AERIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVD 178
Query: 635 GMDGERGSAVXGGRGYYL 688
G +GE+G+ V G RGY+L
Sbjct: 179 GFEGEKGAVVAGSRGYFL 196
>X91257-1|CAA62635.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 224 bits (548), Expect = 2e-58
Identities = 115/198 (58%), Positives = 139/198 (70%), Gaps = 1/198 (0%)
Frame = +2
Query: 98 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVC 277
MVLDLDLFR DK G+P IRE Q+KRFKD LVD +V+ D+ WR+ R ADN +KLKN+C
Sbjct: 1 MVLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLSKLKNLC 60
Query: 278 SKEIGLKMKNKEPSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKND 457
SK IG KMK KEP G +DE VP + + +LT D L L V+QIKKVR+LID AI K D
Sbjct: 61 SKTIGEKMKKKEPVG-DDESVPENVL-SFDDLTADALANLKVSQIKKVRLLIDEAILKCD 118
Query: 458 EGLLAAEKARSAALREVGNHLHESVPVDDDED-HNLVERTDGDCGFRKKYSHVDLICMID 634
+ E R LRE+GN LH SVP+ +DED N VER GDC RKKYSHVDL+ M+D
Sbjct: 119 AERIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKYSHVDLVVMVD 178
Query: 635 GMDGERGSAVXGGRGYYL 688
G +GE+G+ V G RGY+L
Sbjct: 179 GFEGEKGAVVAGSRGYFL 196
>AF275150-1|AAF91411.1| 1115|Homo sapiens transmembrane-type protein
tyrosine phosphatase H protein.
Length = 1115
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 476 EKARSAALREVGNHLHESVPVDDDEDHNLVERTDGDCGFRKKYSHVDLI 622
+K + LR++ +P +D DH D +CGF KY + L+
Sbjct: 782 KKQQKPELRDLVFSSPGDIPAEDFADHVRKNERDSNCGFADKYQQLSLV 830
>U92715-1|AAC39777.1| 825|Homo sapiens breast cancer antiestrogen
resistance 3 protein protein.
Length = 825
Score = 31.5 bits (68), Expect = 2.9
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 140 NPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNF-NKLKNVCSKEIGLKMKNKEP 316
+P + R + F+D L+D VE + K RH D KLK +E+ L ++
Sbjct: 93 SPWQDRHGETFTFRDPHLLDPTVEY-VKFSKERHIMDRTPEKLKKELEEELLLSSEDLRS 151
Query: 317 SGSEDEPVPSEIANNLVNLTGDNL 388
+P +++ NLV GD L
Sbjct: 152 HAWYHGRIPRQVSENLVQRDGDFL 175
>M20470-1|AAA59506.1| 211|Homo sapiens CLTB protein.
Length = 211
Score = 31.5 bits (68), Expect = 2.9
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Frame = +2
Query: 149 KIRENQKKRFKDVALVDAVVEQDTL---------WRKLRHEADNFNKLKNVCSKEIGLKM 301
K RE Q+KR +++ V EQ+ W + + E NK+ N S+E +K
Sbjct: 105 KWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKE 164
Query: 302 KNKEPSGSEDEPV 340
+E G+E E V
Sbjct: 165 SKEETPGTEWEKV 177
>CR536577-1|CAG38814.1| 211|Homo sapiens CLTB protein.
Length = 211
Score = 31.5 bits (68), Expect = 2.9
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Frame = +2
Query: 149 KIRENQKKRFKDVALVDAVVEQDTL---------WRKLRHEADNFNKLKNVCSKEIGLKM 301
K RE Q+KR +++ V EQ+ W + + E NK+ N S+E +K
Sbjct: 105 KWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKE 164
Query: 302 KNKEPSGSEDEPV 340
+E G+E E V
Sbjct: 165 SKEETPGTEWEKV 177
>BT007028-1|AAP35675.1| 211|Homo sapiens clathrin, light
polypeptide (Lcb) protein.
Length = 211
Score = 31.5 bits (68), Expect = 2.9
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Frame = +2
Query: 149 KIRENQKKRFKDVALVDAVVEQDTL---------WRKLRHEADNFNKLKNVCSKEIGLKM 301
K RE Q+KR +++ V EQ+ W + + E NK+ N S+E +K
Sbjct: 105 KWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKE 164
Query: 302 KNKEPSGSEDEPV 340
+E G+E E V
Sbjct: 165 SKEETPGTEWEKV 177
>BC039895-1|AAH39895.1| 825|Homo sapiens breast cancer
anti-estrogen resistance 3 protein.
Length = 825
Score = 31.5 bits (68), Expect = 2.9
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 140 NPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNF-NKLKNVCSKEIGLKMKNKEP 316
+P + R + F+D L+D VE + K RH D KLK +E+ L ++
Sbjct: 93 SPWQDRHGETFTFRDPHLLDPTVEY-VKFSKERHIMDRTPEKLKKELEEELLLSSEDLRS 151
Query: 317 SGSEDEPVPSEIANNLVNLTGDNL 388
+P +++ NLV GD L
Sbjct: 152 HAWYHGRIPRQVSENLVQRDGDFL 175
>BC006457-1|AAH06457.1| 211|Homo sapiens clathrin, light chain
(Lcb) protein.
Length = 211
Score = 31.5 bits (68), Expect = 2.9
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Frame = +2
Query: 149 KIRENQKKRFKDVALVDAVVEQDTL---------WRKLRHEADNFNKLKNVCSKEIGLKM 301
K RE Q+KR +++ V EQ+ W + + E NK+ N S+E +K
Sbjct: 105 KWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKE 164
Query: 302 KNKEPSGSEDEPV 340
+E G+E E V
Sbjct: 165 SKEETPGTEWEKV 177
>BC006332-1|AAH06332.1| 211|Homo sapiens clathrin, light chain
(Lcb) protein.
Length = 211
Score = 31.5 bits (68), Expect = 2.9
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Frame = +2
Query: 149 KIRENQKKRFKDVALVDAVVEQDTL---------WRKLRHEADNFNKLKNVCSKEIGLKM 301
K RE Q+KR +++ V EQ+ W + + E NK+ N S+E +K
Sbjct: 105 KWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKE 164
Query: 302 KNKEPSGSEDEPV 340
+E G+E E V
Sbjct: 165 SKEETPGTEWEKV 177
>AL359820-1|CAH73975.1| 825|Homo sapiens breast cancer
anti-estrogen resistance 3 protein.
Length = 825
Score = 31.5 bits (68), Expect = 2.9
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 140 NPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNF-NKLKNVCSKEIGLKMKNKEP 316
+P + R + F+D L+D VE + K RH D KLK +E+ L ++
Sbjct: 93 SPWQDRHGETFTFRDPHLLDPTVEY-VKFSKERHIMDRTPEKLKKELEEELLLSSEDLRS 151
Query: 317 SGSEDEPVPSEIANNLVNLTGDNL 388
+P +++ NLV GD L
Sbjct: 152 HAWYHGRIPRQVSENLVQRDGDFL 175
>AL109613-1|CAI18950.1| 825|Homo sapiens breast cancer
anti-estrogen resistance 3 protein.
Length = 825
Score = 31.5 bits (68), Expect = 2.9
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 140 NPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNF-NKLKNVCSKEIGLKMKNKEP 316
+P + R + F+D L+D VE + K RH D KLK +E+ L ++
Sbjct: 93 SPWQDRHGETFTFRDPHLLDPTVEY-VKFSKERHIMDRTPEKLKKELEEELLLSSEDLRS 151
Query: 317 SGSEDEPVPSEIANNLVNLTGDNL 388
+P +++ NLV GD L
Sbjct: 152 HAWYHGRIPRQVSENLVQRDGDFL 175
>AF124250-1|AAD28245.1| 825|Homo sapiens SH2-containing protein
Nsp2 protein.
Length = 825
Score = 31.5 bits (68), Expect = 2.9
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 140 NPDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNF-NKLKNVCSKEIGLKMKNKEP 316
+P + R + F+D L+D VE + K RH D KLK +E+ L ++
Sbjct: 93 SPWQDRHGETFTFRDPHLLDPTVEY-VKFSKERHIMDRTPEKLKKELEEELLLSSEDLRS 151
Query: 317 SGSEDEPVPSEIANNLVNLTGDNL 388
+P +++ NLV GD L
Sbjct: 152 HAWYHGRIPRQVSENLVQRDGDFL 175
>BC142709-1|AAI42710.1| 857|Homo sapiens AASDH protein protein.
Length = 857
Score = 31.1 bits (67), Expect = 3.8
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Frame = +2
Query: 110 LDLFRADKDGN-PDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVCSKE 286
L LF KD + + I + +K A+ D +V D+L H + ++L +
Sbjct: 482 LILFMVSKDASVKEYIFKELQKYLPSHAVPDELVLIDSL-PFTSHGKIDVSELNKIYLNY 540
Query: 287 IGLKMKNKEPSGSEDEPVPSE-IANNLVNLTGDNLK----PLTVNQ----IKKVRVL--I 433
I LK +NK SG ED + + + +NL D L+ L +N +K +R+L I
Sbjct: 541 INLKSENKL-SGKEDLWEKLQYLWKSTLNLPEDLLRVPDESLFLNSGGDSLKSIRLLSEI 599
Query: 434 DNAISKNDEGLLAAEKARSAALREVGNHLHESVPVDDD 547
+ + + GLL E S+++ E+ NH+ ++V D+D
Sbjct: 600 EKLVGTSVPGLL--EIILSSSILEIYNHILQTVVPDED 635
>BC141824-1|AAI41825.1| 841|Homo sapiens AASDH protein protein.
Length = 841
Score = 31.1 bits (67), Expect = 3.8
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Frame = +2
Query: 110 LDLFRADKDGN-PDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVCSKE 286
L LF KD + + I + +K A+ D +V D+L H + ++L +
Sbjct: 482 LILFMVSKDASVKEYIFKELQKYLPSHAVPDELVLIDSL-PFTSHGKIDVSELNKIYLNY 540
Query: 287 IGLKMKNKEPSGSEDEPVPSE-IANNLVNLTGDNLK----PLTVNQ----IKKVRVL--I 433
I LK +NK SG ED + + + +NL D L+ L +N +K +R+L I
Sbjct: 541 INLKSENKL-SGKEDLWEKLQYLWKSTLNLPEDLLRVPDESLFLNSGGDSLKSIRLLSEI 599
Query: 434 DNAISKNDEGLLAAEKARSAALREVGNHLHESVPVDDD 547
+ + + GLL E S+++ E+ NH+ ++V D+D
Sbjct: 600 EKLVGTSVPGLL--EIILSSSILEIYNHILQTVVPDED 635
>AY422212-1|AAR31184.1| 1098|Homo sapiens putative non-ribosomal
peptide synthetase NRPS1098 protein.
Length = 1098
Score = 31.1 bits (67), Expect = 3.8
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Frame = +2
Query: 110 LDLFRADKDGN-PDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVCSKE 286
L LF KD + + I + +K A+ D +V D+L H + ++L +
Sbjct: 482 LILFMVSKDASVKEYIFKELQKYLPSHAVPDELVLIDSL-PFTSHGKIDVSELNKIYLNY 540
Query: 287 IGLKMKNKEPSGSEDEPVPSE-IANNLVNLTGDNLK----PLTVNQ----IKKVRVL--I 433
I LK +NK SG ED + + + +NL D L+ L +N +K +R+L I
Sbjct: 541 INLKSENKL-SGKEDLWEKLQYLWKSTLNLPEDLLRVPDESLFLNSGGDSLKSIRLLSEI 599
Query: 434 DNAISKNDEGLLAAEKARSAALREVGNHLHESVPVDDD 547
+ + + GLL E S+++ E+ NH+ ++V D+D
Sbjct: 600 EKLVGTSVPGLL--EIILSSSILEIYNHILQTVVPDED 635
>AY314787-1|AAQ83120.1| 1098|Homo sapiens 2-aminoadipic
6-semialdehyde dehydrogenase protein.
Length = 1098
Score = 31.1 bits (67), Expect = 3.8
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Frame = +2
Query: 110 LDLFRADKDGN-PDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVCSKE 286
L LF KD + + I + +K A+ D +V D+L H + ++L +
Sbjct: 482 LILFMVSKDASVKEYIFKELQKYLPSHAVPDELVLIDSL-PFTSHGKIDVSELNKIYLNY 540
Query: 287 IGLKMKNKEPSGSEDEPVPSE-IANNLVNLTGDNLK----PLTVNQ----IKKVRVL--I 433
I LK +NK SG ED + + + +NL D L+ L +N +K +R+L I
Sbjct: 541 INLKSENKL-SGKEDLWEKLQYLWKSTLNLPEDLLRVPDESLFLNSGGDSLKSIRLLSEI 599
Query: 434 DNAISKNDEGLLAAEKARSAALREVGNHLHESVPVDDD 547
+ + + GLL E S+++ E+ NH+ ++V D+D
Sbjct: 600 EKLVGTSVPGLL--EIILSSSILEIYNHILQTVVPDED 635
>AL391380-1|CAI40723.1| 861|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 26B protein.
Length = 861
Score = 31.1 bits (67), Expect = 3.8
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +2
Query: 296 KMKNKE--PSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKNDEGLL 469
KM+N + P G + PSE L+N+TGD + P NQ+ L D+ S + +GL+
Sbjct: 681 KMENGQITPDGFLSKSAPSE----LINMTGDLMPP---NQVDS---LSDDFTSLSKDGLI 730
Query: 470 AAEKARSAALREVGNHLHESVPVDDDED 553
+K S A VG + S+ VDD +D
Sbjct: 731 --QKPGSNAF--VGGAKNCSLSVDDQKD 754
>AL357834-1|CAI40867.1| 861|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 26B protein.
Length = 861
Score = 31.1 bits (67), Expect = 3.8
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +2
Query: 296 KMKNKE--PSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKNDEGLL 469
KM+N + P G + PSE L+N+TGD + P NQ+ L D+ S + +GL+
Sbjct: 681 KMENGQITPDGFLSKSAPSE----LINMTGDLMPP---NQVDS---LSDDFTSLSKDGLI 730
Query: 470 AAEKARSAALREVGNHLHESVPVDDDED 553
+K S A VG + S+ VDD +D
Sbjct: 731 --QKPGSNAF--VGGAKNCSLSVDDQKD 754
>AK123209-1|BAC85559.1| 308|Homo sapiens protein ( Homo sapiens
cDNA FLJ41215 fis, clone BRALZ2017359, weakly similar
to Homo sapiens RNA helicase HDB/DICE1 mRNA. ).
Length = 308
Score = 31.1 bits (67), Expect = 3.8
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +2
Query: 296 KMKNKE--PSGSEDEPVPSEIANNLVNLTGDNLKPLTVNQIKKVRVLIDNAISKNDEGLL 469
KM+N + P G + PSE L+N+TGD + P NQ+ L D+ S + +GL+
Sbjct: 128 KMENGQITPDGFLSKSAPSE----LINMTGDLMPP---NQVDS---LSDDFTSLSKDGLI 177
Query: 470 AAEKARSAALREVGNHLHESVPVDDDED 553
+K S A VG + S+ VDD +D
Sbjct: 178 --QKPGSNAF--VGGAKNCSLSVDDQKD 201
>AF516672-1|AAP76519.1| 998|Homo sapiens putative non-ribosomal
peptide synthetase NRPS998 protein.
Length = 998
Score = 31.1 bits (67), Expect = 3.8
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Frame = +2
Query: 110 LDLFRADKDGN-PDKIRENQKKRFKDVALVDAVVEQDTLWRKLRHEADNFNKLKNVCSKE 286
L LF KD + + I + +K A+ D +V D+L H + ++L +
Sbjct: 382 LILFMVSKDASVKEYIFKELQKYLPSHAVPDELVLIDSL-PFTSHGKIDVSELNKIYLNY 440
Query: 287 IGLKMKNKEPSGSEDEPVPSE-IANNLVNLTGDNLK----PLTVNQ----IKKVRVL--I 433
I LK +NK SG ED + + + +NL D L+ L +N +K +R+L I
Sbjct: 441 INLKSENKL-SGKEDLWEKLQYLWKSTLNLPEDLLRVPDESLFLNSGGDSLKSIRLLSEI 499
Query: 434 DNAISKNDEGLLAAEKARSAALREVGNHLHESVPVDDD 547
+ + + GLL E S+++ E+ NH+ ++V D+D
Sbjct: 500 EKLVGTSVPGLL--EIILSSSILEIYNHILQTVVPDED 535
>D15049-1|BAA03645.2| 1117|Homo sapiens protein tyrosine phosphatase
precursor protein.
Length = 1117
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 476 EKARSAALREVGNHLHESVPVDDDEDHNLVERTDGDCGFRKKYSHVDLI 622
+K + LR++ +P +D DH D +CGF +Y + L+
Sbjct: 784 KKQQKPELRDLVFSSPGDIPAEDFADHVRKNERDSNCGFADEYQQLSLV 832
>BC146797-1|AAI46798.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 125 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 214
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>BC111716-1|AAI11717.1| 1115|Homo sapiens protein tyrosine
phosphatase, receptor type, H, precursor protein.
Length = 1115
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 476 EKARSAALREVGNHLHESVPVDDDEDHNLVERTDGDCGFRKKYSHVDLI 622
+K + LR++ +P +D DH D +CGF +Y + L+
Sbjct: 782 KKQQKPELRDLVFSSPGDIPAEDFADHVRKNERDSNCGFADEYQQLSLV 830
>BC111715-1|AAI11716.1| 937|Homo sapiens PTPRH protein protein.
Length = 937
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 476 EKARSAALREVGNHLHESVPVDDDEDHNLVERTDGDCGFRKKYSHVDLI 622
+K + LR++ +P +D DH D +CGF +Y + L+
Sbjct: 604 KKQQKPELRDLVFSSPGDIPAEDFADHVRKNERDSNCGFADEYQQLSLV 652
>AY598321-1|AAT06732.1| 644|Homo sapiens L2 protein.
Length = 644
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 464 LLAAEKARSAALREVGNHLH-ESVPVDDDEDHNLVERTDGDC 586
+ + EK+R+A + + + E +P D+ +D N+++ TD DC
Sbjct: 311 IASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDC 352
>AY566246-1|AAS59158.1| 754|Homo sapiens Nijmegen breakage syndrome
1 (nibrin) protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 125 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 214
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AK223256-1|BAD96976.1| 754|Homo sapiens nibrin variant protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 125 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 214
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AK127271-1|BAC86910.1| 1091|Homo sapiens protein ( Homo sapiens cDNA
FLJ45338 fis, clone BRHIP3008082. ).
Length = 1091
Score = 30.3 bits (65), Expect = 6.7
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Frame = +2
Query: 263 LKNVCSKE--IGLKMKNKEPSGSE---DEPVPSEIANNLVNLTGDNLKPLTVNQI---KK 418
+K V KE I L+ KN EPSGSE D P N + L P Q+ K
Sbjct: 848 VKEVIQKEEYIHLERKNDEPSGSEISSDSHAPLHSVTNSPEVAVKKLNPQKEEQVHLENK 907
Query: 419 VRVLIDNAISKNDEGLLAAEKARSA-ALREVGNHLHESVPVDD 544
ID+ +S + + + RS ++E+ H E + +++
Sbjct: 908 ENEPIDSEVSLDYNIIFHSVTGRSEDPIKEISLHTKEHMYLEN 950
>AF069291-2|AAC62232.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 125 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 214
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AF058696-1|AAC39752.1| 754|Homo sapiens cell cycle regulatory
protein p95 protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 125 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 214
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AF051334-1|AAC39732.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 125 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 214
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>AB046791-1|BAB13397.2| 1779|Homo sapiens KIAA1571 protein protein.
Length = 1779
Score = 30.3 bits (65), Expect = 6.7
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Frame = +2
Query: 263 LKNVCSKE--IGLKMKNKEPSGSE---DEPVPSEIANNLVNLTGDNLKPLTVNQI---KK 418
+K V KE I L+ KN EPSGSE D P N + L P Q+ K
Sbjct: 273 VKEVIQKEEYIHLERKNDEPSGSEISSDSHAPLHSVTNSPEVAVKKLNPQKEEQVHLENK 332
Query: 419 VRVLIDNAISKNDEGLLAAEKARSA-ALREVGNHLHESVPVDD 544
ID+ +S + + + RS ++E+ H E + +++
Sbjct: 333 ENEPIDSEVSLDYNIIFHSVTGRSEDPIKEISLHTKEHMYLEN 375
>AB023214-1|BAA76841.2| 646|Homo sapiens KIAA0997 protein protein.
Length = 646
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 464 LLAAEKARSAALREVGNHLH-ESVPVDDDEDHNLVERTDGDC 586
+ + EK+R+A + + + E +P D+ +D N+++ TD DC
Sbjct: 313 IASEEKSRAAERKRIIIKMEPEDIPTDELKDFNIIKVTDKDC 354
>AB013139-1|BAA28616.1| 754|Homo sapiens NBS1 protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 125 ADKDGNPDKIRENQKKRFKDVALVDAVVEQ 214
A K +K+R N+K+ DVA+ D V+EQ
Sbjct: 536 ASKSHAAEKLRSNKKREMDDVAIEDEVLEQ 565
>BC104899-1|AAI04900.1| 825|Homo sapiens leucine-rich repeats and
guanylate kinase domain containing protein.
Length = 825
Score = 29.9 bits (64), Expect = 8.9
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Frame = +2
Query: 227 RKLRHEADNFNKLKNVCSKEIGLKMKNKEPSGSEDEPVPS-EIANNLVNLTGDNLKPLTV 403
+ L+ + N++ +C + G+E E + E+ NNL++L+ N K T+
Sbjct: 193 KNLKKADFSHNQISEICDLSAYHALTKLILDGNEIEEISGLEMCNNLIHLSLANNKITTI 252
Query: 404 NQIKKVRVLIDNAISKNDEGLLAAEKARSAALREVGNHLHESVPVDDDEDHNLVE 568
N + K+ + I + E + E + AL+ + ++ + E+H+L+E
Sbjct: 253 NGLNKLPIKILCLSNNQIEMITGLEDLK--ALQNLDLSHNQISSLQGLENHDLLE 305
>BC104897-1|AAI04898.1| 825|Homo sapiens leucine-rich repeats and
guanylate kinase domain containing protein.
Length = 825
Score = 29.9 bits (64), Expect = 8.9
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Frame = +2
Query: 227 RKLRHEADNFNKLKNVCSKEIGLKMKNKEPSGSEDEPVPS-EIANNLVNLTGDNLKPLTV 403
+ L+ + N++ +C + G+E E + E+ NNL++L+ N K T+
Sbjct: 193 KNLKKADFSHNQISEICDLSAYHALTKLILDGNEIEEISGLEMCNNLIHLSLANNKITTI 252
Query: 404 NQIKKVRVLIDNAISKNDEGLLAAEKARSAALREVGNHLHESVPVDDDEDHNLVE 568
N + K+ + I + E + E + AL+ + ++ + E+H+L+E
Sbjct: 253 NGLNKLPIKILCLSNNQIEMITGLEDLK--ALQNLDLSHNQISSLQGLENHDLLE 305
>AK057348-1|BAB71441.1| 825|Homo sapiens protein ( Homo sapiens
cDNA FLJ32786 fis, clone TESTI2002256, weakly similar to
GUANYLATE KINASE (EC 2.7.4.8). ).
Length = 825
Score = 29.9 bits (64), Expect = 8.9
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Frame = +2
Query: 227 RKLRHEADNFNKLKNVCSKEIGLKMKNKEPSGSEDEPVPS-EIANNLVNLTGDNLKPLTV 403
+ L+ + N++ +C + G+E E + E+ NNL++L+ N K T+
Sbjct: 193 KNLKKADFSHNQISEICDLSAYHALTKLILDGNEIEEISGLEMCNNLIHLSLANNKITTI 252
Query: 404 NQIKKVRVLIDNAISKNDEGLLAAEKARSAALREVGNHLHESVPVDDDEDHNLVE 568
N + K+ + I + E + E + AL+ + ++ + E+H+L+E
Sbjct: 253 NGLNKLPIKILCLSNNQIEMITGLEDLK--ALQNLDLSHNQISSLQGLENHDLLE 305
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,827,947
Number of Sequences: 237096
Number of extensions: 1806446
Number of successful extensions: 4940
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 4707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4919
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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