Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_H04
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.30 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   2.1  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   6.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   6.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -1

Query: 550 FFFCLNRLRVRIIDDFPFMIITIHV*ALCCYIF 452
           F  C     V ++   PF+I T+H   LC Y F
Sbjct: 72  FLLCSGYFTVHLLFYCPFIIFTVHF-LLCTYYF 103



 Score = 24.2 bits (50), Expect = 1.2
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
 Frame = -1

Query: 709 HNILCK*HGNIIFEILLNTSDLLSILNIF-INVSY--CAACFLLN*FALRPCYYFS---F 548
           H +LC  +    F ILL          IF +++ +  C   F++  F L   YYF     
Sbjct: 95  HFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFI 154

Query: 547 FFCLNRLRVRIIDDF--PFMIITIHV*ALCCYIF 452
            F ++ L +  I  F   F+I T+H+   C +IF
Sbjct: 155 IFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIF 188


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 251 SPISHLSAFFLSHQFSNVSVLLCGLVVHYSIVLDVKAFREEQ 126
           SPI H  +  ++   S   +L   L+V+Y++ L    F+E Q
Sbjct: 154 SPIDHTESNIINDMCSLYYILQITLIVNYALALK-NRFKELQ 194


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 290 IFFVRTERSIDEISPISHLSAFFLSHQFSNVSVLLCGLV 174
           +FF R E+S  E   IS++S   L   F+   +++C  V
Sbjct: 222 LFFFRFEKSKFEPFLISNISLVSLIFLFNCTLIIMCDCV 260


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +2

Query: 614  YINEDVQNAQEI*SIQQDLKNNIAMSFTQYIVMYQKLCNFFVLSLFNDVEVYT 772
            Y+ E V+  +E    +  LK +   ++TQY V+ Q         L +D++ YT
Sbjct: 1044 YLFETVEFGREE-GKEHHLKISNLKTYTQYSVVVQAFNKVGAGPLSDDIKAYT 1095


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +2

Query: 674 NNIAMSFTQYIVMYQKLCNFFVLSLFNDVEVY 769
           N+   +FT     +   C+F  L + N V V+
Sbjct: 65  NSYMYAFTHIFFFFAICCDFIALIVVNIVHVF 96


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 313 FTSSRIPVFSLSVRNAVLMK 254
           F   R P F L+VRN  ++K
Sbjct: 634 FQGVRSPTFHLTVRNTSIIK 653


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 340 TDMTSSIQYFTSSRIPVFSLSVRNA 266
           TDMT +      ++IP  S++V+ A
Sbjct: 3   TDMTPTAGQLYGAQIPAMSMNVKAA 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,957
Number of Sequences: 336
Number of extensions: 3518
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)