Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_H04
(787 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001310-1|AAH01310.1| 232|Homo sapiens chromosome 2 open readi... 54 4e-07
AC012360-2|AAY15011.1| 232|Homo sapiens unknown protein. 54 4e-07
EF068222-1|ABK64187.1| 2358|Homo sapiens jumonji domain-containi... 34 0.67
BX537954-1|CAD97921.1| 2210|Homo sapiens hypothetical protein pr... 34 0.67
AL713895-3|CAI10950.1| 759|Homo sapiens novel protein protein. 34 0.67
AL607128-2|CAI14188.1| 759|Homo sapiens novel protein protein. 34 0.67
AK027280-1|BAB55015.1| 427|Homo sapiens protein ( Homo sapiens ... 34 0.67
AK022216-1|BAB13988.1| 538|Homo sapiens protein ( Homo sapiens ... 31 6.2
AK023026-1|BAB14363.1| 538|Homo sapiens protein ( Homo sapiens ... 30 8.2
>BC001310-1|AAH01310.1| 232|Homo sapiens chromosome 2 open reading
frame 49 protein.
Length = 232
Score = 54.4 bits (125), Expect = 4e-07
Identities = 33/103 (32%), Positives = 56/103 (54%)
Frame = +2
Query: 107 NVGKTMAVPHEMLLHPELLSNEQLTHIIEQRHLRIDGIEKMLRDDLLDLFHQYCVPYGQR 286
+VG E+LLHPELLS E L +EQ+++ ++ ++ +D L DL+ Q+ +P QR
Sbjct: 4 DVGGRSCTDSELLLHPELLSQEFLLLTLEQKNIAVETDVRVNKDSLTDLYVQHAIPLPQR 63
Query: 287 KYRDSGRGKILNRTRHISPEPSRSLNKIKETRHTTVERIKPPP 415
+ GK++ + R E N+ K R +TV+ ++ P
Sbjct: 64 DLPKNRWGKMMEKKR----EQHEIKNETK--RSSTVDGLRKRP 100
>AC012360-2|AAY15011.1| 232|Homo sapiens unknown protein.
Length = 232
Score = 54.4 bits (125), Expect = 4e-07
Identities = 33/103 (32%), Positives = 56/103 (54%)
Frame = +2
Query: 107 NVGKTMAVPHEMLLHPELLSNEQLTHIIEQRHLRIDGIEKMLRDDLLDLFHQYCVPYGQR 286
+VG E+LLHPELLS E L +EQ+++ ++ ++ +D L DL+ Q+ +P QR
Sbjct: 4 DVGGRSCTDSELLLHPELLSQEFLLLTLEQKNIAVETDVRVNKDSLTDLYVQHAIPLPQR 63
Query: 287 KYRDSGRGKILNRTRHISPEPSRSLNKIKETRHTTVERIKPPP 415
+ GK++ + R E N+ K R +TV+ ++ P
Sbjct: 64 DLPKNRWGKMMEKKR----EQHEIKNETK--RSSTVDGLRKRP 100
>EF068222-1|ABK64187.1| 2358|Homo sapiens jumonji domain-containing
1 C splice variant protein.
Length = 2358
Score = 33.9 bits (74), Expect = 0.67
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +2
Query: 350 SRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSNNHKRKIINDPNSE 529
SR N + +H +R KP D +MKR++ +NV+ +S N ++II++ + +
Sbjct: 154 SRGENPKGKNKHLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQ 213
Query: 530 PIQAKKERK 556
+ + + K
Sbjct: 214 KPENELKNK 222
>BX537954-1|CAD97921.1| 2210|Homo sapiens hypothetical protein
protein.
Length = 2210
Score = 33.9 bits (74), Expect = 0.67
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +2
Query: 350 SRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSNNHKRKIINDPNSE 529
SR N + +H +R KP D +MKR++ +NV+ +S N ++II++ + +
Sbjct: 117 SRGENPKGKNKHLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQ 176
Query: 530 PIQAKKERK 556
+ + + K
Sbjct: 177 KPENELKNK 185
>AL713895-3|CAI10950.1| 759|Homo sapiens novel protein protein.
Length = 759
Score = 33.9 bits (74), Expect = 0.67
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +2
Query: 350 SRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSNNHKRKIINDPNSE 529
SR N + +H +R KP D +MKR++ +NV+ +S N ++II++ + +
Sbjct: 336 SRGENPKGKNKHLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQ 395
Query: 530 PIQAKKERK 556
+ + + K
Sbjct: 396 KPENELKNK 404
>AL607128-2|CAI14188.1| 759|Homo sapiens novel protein protein.
Length = 759
Score = 33.9 bits (74), Expect = 0.67
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +2
Query: 350 SRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSNNHKRKIINDPNSE 529
SR N + +H +R KP D +MKR++ +NV+ +S N ++II++ + +
Sbjct: 336 SRGENPKGKNKHLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQ 395
Query: 530 PIQAKKERK 556
+ + + K
Sbjct: 396 KPENELKNK 404
>AK027280-1|BAB55015.1| 427|Homo sapiens protein ( Homo sapiens
cDNA FLJ14374 fis, clone HEMBA1001635, weakly similar to
TESTIS SPECIFIC PROTEIN A. ).
Length = 427
Score = 33.9 bits (74), Expect = 0.67
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +2
Query: 350 SRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSNNHKRKIINDPNSE 529
SR N + +H +R KP D +MKR++ +NV+ +S N ++II++ + +
Sbjct: 336 SRGENPKGKNKHLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQ 395
Query: 530 PIQAKKERK 556
+ + + K
Sbjct: 396 KPENELKNK 404
>AK022216-1|BAB13988.1| 538|Homo sapiens protein ( Homo sapiens
cDNA FLJ12154 fis, clone MAMMA1000468. ).
Length = 538
Score = 30.7 bits (66), Expect = 6.2
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 284 RKYR-DSGRGKILNRTRHISPEPSRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENV 460
R+YR + R I+ RH PE R N + E + E P + R + + +
Sbjct: 396 RRYRLFANRSSIM---RHFGPEDQRLWNDVTEELMSDEEDSLNEPSVWVARPPRFRAQRL 452
Query: 461 TTKCSHMNSNN 493
T C H+++N+
Sbjct: 453 TELCYHLDANS 463
>AK023026-1|BAB14363.1| 538|Homo sapiens protein ( Homo sapiens
cDNA FLJ12964 fis, clone NT2RP2005732. ).
Length = 538
Score = 30.3 bits (65), Expect = 8.2
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 284 RKYR-DSGRGKILNRTRHISPEPSRSLNKIKETRHTTVERIKPPPDLLSGHMKRIKLENV 460
R+YR + R I+ RH PE R N + E + E P + R + + +
Sbjct: 396 RRYRLFANRSSIM---RHFGPEDQRLWNDVTEELMSDEEDSLNEPGVWVARPPRFRAQRL 452
Query: 461 TTKCSHMNSNN 493
T C H+++N+
Sbjct: 453 TELCYHLDANS 463
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,148,719
Number of Sequences: 237096
Number of extensions: 1810442
Number of successful extensions: 3705
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3705
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -