Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_H04
         (787 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119574-1|AAM50228.1|  409|Drosophila melanogaster LD03827p pro...    29   9.5  
AY118849-1|AAM50709.1|  880|Drosophila melanogaster GM15606p pro...    29   9.5  
AE014134-1375|AAF52587.1|  409|Drosophila melanogaster CG7221-PA...    29   9.5  

>AY119574-1|AAM50228.1|  409|Drosophila melanogaster LD03827p
           protein.
          Length = 409

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -3

Query: 317 IFYLFQNPGIFFVRTERSIDEISP---ISHLSAFFLSHQFSNV 198
           I YL  N G+F +   R++D +     +SHLS F+L+ Q   +
Sbjct: 203 IDYLILNAGVFALPYTRTVDGLETTFQVSHLSHFYLTLQLETL 245


>AY118849-1|AAM50709.1|  880|Drosophila melanogaster GM15606p
           protein.
          Length = 880

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +2

Query: 386 TTVERIKPPPDLLSGHMKRIKLENVTTKCSHMNSNN-HKRKIINDPNSEP 532
           TT ERIK   D L  H K    + ++T   +  +N  H RK ++ P  +P
Sbjct: 28  TTKERIKKHQDWLREHRKPKTKKKISTNSYYELANLWHTRKDLSSPKQKP 77


>AE014134-1375|AAF52587.1|  409|Drosophila melanogaster CG7221-PA
           protein.
          Length = 409

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -3

Query: 317 IFYLFQNPGIFFVRTERSIDEISP---ISHLSAFFLSHQFSNV 198
           I YL  N G+F +   R++D +     +SHLS F+L+ Q   +
Sbjct: 203 IDYLILNAGVFALPYTRTVDGLETTFQVSHLSHFYLTLQLETL 245


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,600,499
Number of Sequences: 53049
Number of extensions: 585503
Number of successful extensions: 1661
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1661
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)