Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_H03
(708 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002896-1|AAH02896.1| 289|Homo sapiens zinc finger, matrin typ... 35 0.33
AY037945-1|AAK71491.1| 288|Homo sapiens zinc finger protein WIG... 35 0.33
AK022358-1|BAB14020.1| 289|Homo sapiens protein ( Homo sapiens ... 35 0.33
AF355465-1|AAK83287.1| 288|Homo sapiens WIG-1/PAG608 protein pr... 35 0.33
BC007775-1|AAH07775.1| 294|Homo sapiens zinc finger protein 346... 33 0.76
AK131469-1|BAD18614.1| 319|Homo sapiens protein ( Homo sapiens ... 33 0.76
AF083340-1|AAD52018.1| 294|Homo sapiens double-stranded RNA-bin... 33 0.76
AK023904-1|BAB14719.1| 229|Homo sapiens protein ( Homo sapiens ... 31 5.3
AL834284-1|CAD38958.1| 349|Homo sapiens hypothetical protein pr... 30 9.3
AL050060-1|CAB43253.1| 324|Homo sapiens hypothetical protein pr... 30 9.3
>BC002896-1|AAH02896.1| 289|Homo sapiens zinc finger, matrin type 3
protein.
Length = 289
Score = 34.7 bits (76), Expect = 0.33
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +2
Query: 485 PAMRRPNRVERVKRYLMRCGLTKDSLKNIPREILHKIEPEYCGVCALELDSFGMSRLHYL 664
P R N VE ++ S K R IL E +YC +C S +++ HY
Sbjct: 109 PPARMSNVVEPAATPVVPVPPQMGSFKPGGRVIL-ATENDYCKLCDASFSSPAVAQAHYQ 167
Query: 665 SKNHAKNL 688
KNHAK L
Sbjct: 168 GKNHAKRL 175
Score = 34.3 bits (75), Expect = 0.43
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 596 EPEYCGVCALELDSFGMSRLHYLSKNHAKNLXKW 697
+P YC +C + L+S ++ HY KNH K L +
Sbjct: 68 KPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNY 101
>AY037945-1|AAK71491.1| 288|Homo sapiens zinc finger protein WIG1
protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.33
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +2
Query: 485 PAMRRPNRVERVKRYLMRCGLTKDSLKNIPREILHKIEPEYCGVCALELDSFGMSRLHYL 664
P R N VE ++ S K R IL E +YC +C S +++ HY
Sbjct: 109 PPARMSNVVEPAATPVVPVPPQMGSFKPGGRVIL-ATENDYCKLCDASFSSPAVAQAHYQ 167
Query: 665 SKNHAKNL 688
KNHAK L
Sbjct: 168 GKNHAKRL 175
Score = 34.3 bits (75), Expect = 0.43
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 596 EPEYCGVCALELDSFGMSRLHYLSKNHAKNLXKW 697
+P YC +C + L+S ++ HY KNH K L +
Sbjct: 68 KPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNY 101
>AK022358-1|BAB14020.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ12296 fis, clone MAMMA1001820, moderately
similar to Rattus norvegicus mRNA for PAG608 gene. ).
Length = 289
Score = 34.7 bits (76), Expect = 0.33
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +2
Query: 485 PAMRRPNRVERVKRYLMRCGLTKDSLKNIPREILHKIEPEYCGVCALELDSFGMSRLHYL 664
P R N VE ++ S K R IL E +YC +C S +++ HY
Sbjct: 109 PPARMSNVVEPAATPVVPVPPQMGSFKPGGRVIL-ATENDYCKLCDASFSSPAVAQAHYQ 167
Query: 665 SKNHAKNL 688
KNHAK L
Sbjct: 168 GKNHAKRL 175
Score = 34.3 bits (75), Expect = 0.43
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 596 EPEYCGVCALELDSFGMSRLHYLSKNHAKNLXKW 697
+P YC +C + L+S ++ HY KNH K L +
Sbjct: 68 KPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNY 101
>AF355465-1|AAK83287.1| 288|Homo sapiens WIG-1/PAG608 protein
protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.33
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +2
Query: 485 PAMRRPNRVERVKRYLMRCGLTKDSLKNIPREILHKIEPEYCGVCALELDSFGMSRLHYL 664
P R N VE ++ S K R IL E +YC +C S +++ HY
Sbjct: 109 PPARMSNVVEPAATPVVPVPPQMGSFKPGGRVIL-ATENDYCKLCDASFSSPAVAQAHYQ 167
Query: 665 SKNHAKNL 688
KNHAK L
Sbjct: 168 GKNHAKRL 175
Score = 34.3 bits (75), Expect = 0.43
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 596 EPEYCGVCALELDSFGMSRLHYLSKNHAKNLXKW 697
+P YC +C + L+S ++ HY KNH K L +
Sbjct: 68 KPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNY 101
>BC007775-1|AAH07775.1| 294|Homo sapiens zinc finger protein 346
protein.
Length = 294
Score = 33.5 bits (73), Expect = 0.76
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +2
Query: 515 RVKRYLMRCGLT--KDSLKNIP---REILHKIEPEYCGVCALELDSFGMSRLHYLSKNHA 679
+VKRYL G+ K K + + K + + C +C + S +++ HYL K HA
Sbjct: 100 KVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHA 159
Query: 680 KNL 688
KNL
Sbjct: 160 KNL 162
>AK131469-1|BAD18614.1| 319|Homo sapiens protein ( Homo sapiens
cDNA FLJ16637 fis, clone TESTI4025547, highly similar
to Homo sapiens double-stranded RNA-binding zinc finger
protein JAZ (JAZ). ).
Length = 319
Score = 33.5 bits (73), Expect = 0.76
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +2
Query: 515 RVKRYLMRCGLT--KDSLKNIP---REILHKIEPEYCGVCALELDSFGMSRLHYLSKNHA 679
+VKRYL G+ K K + + K + + C +C + S +++ HYL K HA
Sbjct: 125 KVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHA 184
Query: 680 KNL 688
KNL
Sbjct: 185 KNL 187
>AF083340-1|AAD52018.1| 294|Homo sapiens double-stranded
RNA-binding zinc finger protein JAZ protein.
Length = 294
Score = 33.5 bits (73), Expect = 0.76
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +2
Query: 515 RVKRYLMRCGLT--KDSLKNIP---REILHKIEPEYCGVCALELDSFGMSRLHYLSKNHA 679
+VKRYL G+ K K + + K + + C +C + S +++ HYL K HA
Sbjct: 100 KVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHA 159
Query: 680 KNL 688
KNL
Sbjct: 160 KNL 162
>AK023904-1|BAB14719.1| 229|Homo sapiens protein ( Homo sapiens
cDNA FLJ13842 fis, clone THYRO1000793. ).
Length = 229
Score = 30.7 bits (66), Expect = 5.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 605 YCGVCALELDSFGMSRLHYLSKNHAKNLXK 694
YCG+CA ++ M++ HY K H KN +
Sbjct: 146 YCGLCAAWFNNPLMAQQHYDGKKHKKNAAR 175
>AL834284-1|CAD38958.1| 349|Homo sapiens hypothetical protein
protein.
Length = 349
Score = 29.9 bits (64), Expect = 9.3
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 521 KRYLMRCGLTKDSLKNIPREILHKIEPEYCGVCALELDSFGMSR-LHYLSKNHAKNLXKW 697
++ L R LTK+ LK IP K + + C +C E + R L H++ + W
Sbjct: 200 RKRLQRNRLTKEQLKQIPTHDYQKDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPW 259
Query: 698 VSK 706
+++
Sbjct: 260 LTQ 262
>AL050060-1|CAB43253.1| 324|Homo sapiens hypothetical protein
protein.
Length = 324
Score = 29.9 bits (64), Expect = 9.3
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 521 KRYLMRCGLTKDSLKNIPREILHKIEPEYCGVCALELDSFGMSR-LHYLSKNHAKNLXKW 697
++ L R LTK+ LK IP K + + C +C E + R L H++ + W
Sbjct: 175 RKRLQRNRLTKEQLKQIPTHDYQKDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPW 234
Query: 698 VSK 706
+++
Sbjct: 235 LTQ 237
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,665,770
Number of Sequences: 237096
Number of extensions: 2083589
Number of successful extensions: 4099
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4098
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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