Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_G24
         (755 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   4.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   4.1  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    22   5.4  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   5.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   5.4  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   7.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.4  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 671 QRNQLLWHVVFPQSAWVSSLESGQSTTP 588
           QRNQL+ +V   +     +++SG   TP
Sbjct: 335 QRNQLIQYVATLEKRLRDAIDSGNVITP 362


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 661 NCSGMWSSRKAHGFRRS 611
           NC G WSS+K+   RRS
Sbjct: 365 NCCGKWSSQKSEP-RRS 380


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 751 VAAHQSYRRTXGFRCRAP 698
           VAA+ +Y R  G R R P
Sbjct: 416 VAAYNTYGRNAGLRYRGP 433


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -1

Query: 617 SLESGQSTTPSHLPSNEMH-VPSRQRHSDFLQLEVCLRRLELCNPNFAGI 471
           S+  G        PS   H +P +QR S+F    + ++R+   + N A I
Sbjct: 122 SIIDGWELNGEVFPSKMDHQLPLKQRSSEFCGKNIGMKRIFTSSQNIAVI 171


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = -1

Query: 674 VQRNQLLWHVVFPQSAWVSSLESGQSTTPSHLPSNEMHVPSRQRHS 537
           V+R ++   V +P +  +++  +    TPS      +H  + Q HS
Sbjct: 334 VKREKIKISVSYPSTETLNTKCNTLERTPSKCSQTSVHYSNGQTHS 379


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 559 TCISFDGKCDGVVD 600
           +C+S DG C  +VD
Sbjct: 920 SCVSNDGGCSSLVD 933


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 406 IDRVCNGIEDCSGAEDETVC 465
           +DR+ N + +C   E   VC
Sbjct: 98  VDRLRNDLFECENKEKSNVC 117


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,583
Number of Sequences: 438
Number of extensions: 3496
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)