Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_G23
         (814 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    25   0.54 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   6.7  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   6.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.8  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 19/64 (29%), Positives = 33/64 (51%)
 Frame = +1

Query: 316 NLAFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDA 495
           N+AFI L+   P      L+  +++  L  +  F+K L FI +  + +LTIG   +  + 
Sbjct: 408 NIAFIKLATEWPQLMKAWLKIELLVGNLGMRRNFRKKLDFI-FTFITLLTIGLYFQLCEF 466

Query: 496 STVN 507
           S +N
Sbjct: 467 SRLN 470


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 727 IFEDFNSLYDIFVILIIVNSAI 792
           I  D  SLY I  I +IVN A+
Sbjct: 163 IINDMCSLYYILQITLIVNYAL 184


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 715 ELGAIFEDFNSLYDIFVILIIVNSAI 792
           EL    +DFN ++ I  +LII  S +
Sbjct: 188 ELKNTVDDFNDIFGISFLLIISYSTL 213


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +3

Query: 24  RCENLFPNKQGFIIFALYIILFGISRCICNCIKN 125
           +C+ L  +K   I+   ++ILF +     +  KN
Sbjct: 32  KCQRLKTDKNCTIVIIFHLILFAVLLYFASLEKN 65


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 13/54 (24%), Positives = 24/54 (44%)
 Frame = -3

Query: 758 MSYKELKSSNIAPNSPFNNNTXKLHRTESKYIKTFCKNMLTCDPCFFNKYSLNV 597
           MS+ +L +  +AP+ PF  +T        K +     N+ +    FF    L++
Sbjct: 197 MSHNKLINLVVAPSVPFEQDTGLGGLQNIKVLDLSFNNITSVAKQFFRPVELSL 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,828
Number of Sequences: 336
Number of extensions: 3975
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)