Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_G23
         (814 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   2.1  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   4.8  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   8.5  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 583 NKSSENLLIRNKYLVLVTKRCHLLWSSPLMHQSS 482
           N +  N  +R K  VL+     +LW  P ++QSS
Sbjct: 117 NNADGNYEVRYKSNVLIYPNGEVLWVPPAIYQSS 150


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 496 STVNSKEDGNAWSQVLNIYFLSI 564
           +TVN+K   N W  +L I F S+
Sbjct: 547 ATVNNKHVWNTWFVLLTIIFCSV 569


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +1

Query: 319 LAFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILT 465
           ++ +N +H++     ILL+F   +  L+  F +   + F +WI    +T
Sbjct: 540 MSLVNHNHFN-RRVNILLEFIPQMMFLVLLFAYMCFMMFFKWIMYSAVT 587


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,083
Number of Sequences: 2352
Number of extensions: 14507
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)