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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_G23
         (814 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045639-3|AAL11098.1|  383|Caenorhabditis elegans Hypothetical ...    69   4e-12
AF045639-2|AAC02568.2|  382|Caenorhabditis elegans Hypothetical ...    69   4e-12
AF324489-1|AAK49910.1|  351|Caenorhabditis elegans F44C8.7-like ...    68   9e-12
AF016438-4|AAB65894.2|  351|Caenorhabditis elegans Hypothetical ...    68   9e-12
AF324488-1|AAK49909.1|  314|Caenorhabditis elegans B0212.4-like ...    66   4e-11
AF045639-4|AAV58895.1|  313|Caenorhabditis elegans Hypothetical ...    66   4e-11
AF003383-2|AAB54235.2|  344|Caenorhabditis elegans Hypothetical ...    60   2e-09
AF024500-3|AAB70363.1|  314|Caenorhabditis elegans Hypothetical ...    58   6e-09
Z82288-8|CAB05329.3|  328|Caenorhabditis elegans Hypothetical pr...    46   4e-05
Z81102-5|CAB03205.3|  328|Caenorhabditis elegans Hypothetical pr...    46   4e-05
Z82288-7|CAB05326.1|  390|Caenorhabditis elegans Hypothetical pr...    42   5e-04
Z83125-7|CAB05619.1|  407|Caenorhabditis elegans Hypothetical pr...    29   5.2  
AC006722-6|AAK68411.2|  488|Caenorhabditis elegans Hypothetical ...    29   5.2  
AC006645-11|AAF39850.1|  472|Caenorhabditis elegans Hypothetical...    29   5.2  
Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p...    28   6.9  
Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p...    28   6.9  

>AF045639-3|AAL11098.1|  383|Caenorhabditis elegans Hypothetical
           protein B0212.4b protein.
          Length = 383

 Score = 68.9 bits (161), Expect = 4e-12
 Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 8/228 (3%)
 Frame = +1

Query: 154 TLVVFLSELLKLIVSAI--LYTLGRENKP--HIFKAIAINXXXXXXXXXXXXXXCFYNNL 321
           T  VF+ E+LKL    I  L+  G   K    + K I  N                 NNL
Sbjct: 65  TTSVFMMEVLKLGFCLIITLFKSGSIKKTCHELHKTIWQNRLETMKVAVPAVVYAIQNNL 124

Query: 322 AFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDAST 501
            +I L++ DPT+Y + LQ R++ TA L   L  K L++ QW +  +  +G +I   D + 
Sbjct: 125 YYIALANVDPTTYSVTLQIRILTTAALSVCLLNKKLSWYQWGAQVMALLGVVIVQLDKTN 184

Query: 502 VNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYLDSV 681
            + +  GN W  V  +  +      + S  AG + E +LK   S  ++++QN+ + + ++
Sbjct: 185 SHKEAVGNFWIGVSAVVGMC-----WTSAFAGVYFEKMLK--NSSADVWIQNIRLSILTL 237

Query: 682 LCNXIVLL-LKGEL---GAIFEDFNSLYDIFVILIIVNSAIXGIVTSF 813
               I ++   GE    G +FE ++++  +  IL  V      +V  +
Sbjct: 238 FFAGITMITTDGEAVFGGRMFEGWSNMVWLVTILNSVGGLCISLVMKY 285


>AF045639-2|AAC02568.2|  382|Caenorhabditis elegans Hypothetical
           protein B0212.4a protein.
          Length = 382

 Score = 68.9 bits (161), Expect = 4e-12
 Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 8/228 (3%)
 Frame = +1

Query: 154 TLVVFLSELLKLIVSAI--LYTLGRENKP--HIFKAIAINXXXXXXXXXXXXXXCFYNNL 321
           T  VF+ E+LKL    I  L+  G   K    + K I  N                 NNL
Sbjct: 64  TTSVFMMEVLKLGFCLIITLFKSGSIKKTCHELHKTIWQNRLETMKVAVPAVVYAIQNNL 123

Query: 322 AFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDAST 501
            +I L++ DPT+Y + LQ R++ TA L   L  K L++ QW +  +  +G +I   D + 
Sbjct: 124 YYIALANVDPTTYSVTLQIRILTTAALSVCLLNKKLSWYQWGAQVMALLGVVIVQLDKTN 183

Query: 502 VNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYLDSV 681
            + +  GN W  V  +  +      + S  AG + E +LK   S  ++++QN+ + + ++
Sbjct: 184 SHKEAVGNFWIGVSAVVGMC-----WTSAFAGVYFEKMLK--NSSADVWIQNIRLSILTL 236

Query: 682 LCNXIVLL-LKGEL---GAIFEDFNSLYDIFVILIIVNSAIXGIVTSF 813
               I ++   GE    G +FE ++++  +  IL  V      +V  +
Sbjct: 237 FFAGITMITTDGEAVFGGRMFEGWSNMVWLVTILNSVGGLCISLVMKY 284


>AF324489-1|AAK49910.1|  351|Caenorhabditis elegans F44C8.7-like
           protein protein.
          Length = 351

 Score = 67.7 bits (158), Expect = 9e-12
 Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 4/188 (2%)
 Frame = +1

Query: 154 TLVVFLSELLKLIVSAILYTLGREN----KPHIFKAIAINXXXXXXXXXXXXXXCFYNNL 321
           T  VF+ E+LKL+   I+     ++       +++ I  N                 NNL
Sbjct: 61  TTSVFMMEVLKLLFCLIIVLFKTKSFEKTGKKLYEHIWKNRVETLKVSVPAVVYAIQNNL 120

Query: 322 AFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDAST 501
            +I L++ D T+Y + +Q R++ TALL   +  + L+  QW++ G+  IG ++   D S 
Sbjct: 121 YYIALANIDATTYSVTVQLRILTTALLSVIILNQKLSNYQWLAQGMALIGVVLVQIDNSN 180

Query: 502 VNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYLDSV 681
            + K  GN W  +  ++ +      + S  AG + E +LK+  S  ++++QN+ +   ++
Sbjct: 181 PHGKVFGNFWLGITAVFGMC-----WTSGFAGVYFEKMLKE--SSADVWVQNIRLSTLTL 233

Query: 682 LCNXIVLL 705
           L   I +L
Sbjct: 234 LFAGITML 241


>AF016438-4|AAB65894.2|  351|Caenorhabditis elegans Hypothetical
           protein F44C8.7 protein.
          Length = 351

 Score = 67.7 bits (158), Expect = 9e-12
 Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 4/188 (2%)
 Frame = +1

Query: 154 TLVVFLSELLKLIVSAILYTLGREN----KPHIFKAIAINXXXXXXXXXXXXXXCFYNNL 321
           T  VF+ E+LKL+   I+     ++       +++ I  N                 NNL
Sbjct: 61  TTSVFMMEVLKLLFCLIIVLFKTKSFEKTGKKLYEHIWKNRVETLKVSVPAVVYAIQNNL 120

Query: 322 AFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDAST 501
            +I L++ D T+Y + +Q R++ TALL   +  + L+  QW++ G+  IG ++   D S 
Sbjct: 121 YYIALANIDATTYSVTVQLRILTTALLSVIILNQKLSNYQWLAQGMALIGVVLVQIDNSN 180

Query: 502 VNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYLDSV 681
            + K  GN W  +  ++ +      + S  AG + E +LK+  S  ++++QN+ +   ++
Sbjct: 181 PHGKVFGNFWLGITAVFGMC-----WTSGFAGVYFEKMLKE--SSADVWVQNIRLSTLTL 233

Query: 682 LCNXIVLL 705
           L   I +L
Sbjct: 234 LFAGITML 241


>AF324488-1|AAK49909.1|  314|Caenorhabditis elegans B0212.4-like
           protein protein.
          Length = 314

 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
 Frame = +1

Query: 313 NNLAFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFD 492
           NNL +I L++ DPT+Y + LQ R++ TA L   L  K L++ QW +  +  +G +I   D
Sbjct: 53  NNLYYIALANVDPTTYSVTLQIRILTTAALSVCLLNKKLSWYQWGAQVMALLGVVIVQLD 112

Query: 493 ASTVNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYL 672
            +  + +  GN W  V  +  +      + S  AG + E +LK   S  ++++QN+ + +
Sbjct: 113 KTNSHKEAVGNFWIGVSAVVGMC-----WTSAFAGVYFEKMLK--NSSADVWIQNIRLSI 165

Query: 673 DSVLCNXIVLL-LKGEL---GAIFEDFNSLYDIFVILIIVNSAIXGIVTSF 813
            ++    I ++   GE    G +FE ++++  +  IL  V      +V  +
Sbjct: 166 LTLFFAGITMITTDGEAVFGGRMFEGWSNMVWLVTILNSVGGLCISLVMKY 216


>AF045639-4|AAV58895.1|  313|Caenorhabditis elegans Hypothetical
           protein B0212.4c protein.
          Length = 313

 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
 Frame = +1

Query: 313 NNLAFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFD 492
           NNL +I L++ DPT+Y + LQ R++ TA L   L  K L++ QW +  +  +G +I   D
Sbjct: 52  NNLYYIALANVDPTTYSVTLQIRILTTAALSVCLLNKKLSWYQWGAQVMALLGVVIVQLD 111

Query: 493 ASTVNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYL 672
            +  + +  GN W  V  +  +      + S  AG + E +LK   S  ++++QN+ + +
Sbjct: 112 KTNSHKEAVGNFWIGVSAVVGMC-----WTSAFAGVYFEKMLK--NSSADVWIQNIRLSI 164

Query: 673 DSVLCNXIVLL-LKGEL---GAIFEDFNSLYDIFVILIIVNSAIXGIVTSF 813
            ++    I ++   GE    G +FE ++++  +  IL  V      +V  +
Sbjct: 165 LTLFFAGITMITTDGEAVFGGRMFEGWSNMVWLVTILNSVGGLCISLVMKY 215


>AF003383-2|AAB54235.2|  344|Caenorhabditis elegans Hypothetical
           protein ZC250.3 protein.
          Length = 344

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 4/224 (1%)
 Frame = +1

Query: 151 TTLVVFLSELLKLIV-SAILYTLGRENKPHIFK---AIAINXXXXXXXXXXXXXXCFYNN 318
           TT+ VF+ E++K++V SAI+    +    +I +   AI  +                 NN
Sbjct: 43  TTVNVFMMEIIKVVVCSAIMIYTTKSVMKYINELKLAIFEHRSETLKVCIPALIYTLQNN 102

Query: 319 LAFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDAS 498
           L +I LSH + T++ I  Q ++  TA+   F   K L+  QW +L +L +G     +  S
Sbjct: 103 LYYIALSHLEATTFCISYQMKIFTTAIFMYFFLGKKLSTKQWWALVLLVLGVADIQYVYS 162

Query: 499 TVNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYLDS 678
              + ED     Q     F+++    F S  AG + E +LK   S+ +I++QN+ + L  
Sbjct: 163 PPPASED---VEQNPMYGFMAVLTMCFTSAFAGVYLEKVLK--SSNASIWVQNIRLALIG 217

Query: 679 VLCNXIVLLLKGELGAIFEDFNSLYDIFVILIIVNSAIXGIVTS 810
           +  + + +          +     +D  V+ + V +++ GI+ S
Sbjct: 218 LPISFLSMWYYDWEKINEQGAFRGWDFVVVCLTVTNSVGGILIS 261


>AF024500-3|AAB70363.1|  314|Caenorhabditis elegans Hypothetical
           protein K06H6.3 protein.
          Length = 314

 Score = 58.4 bits (135), Expect = 6e-09
 Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
 Frame = +1

Query: 154 TLVVFLSELLKLIVSAILYTLG----RENKPHIFKAIAINXXXXXXXXXXXXXXCFYNNL 321
           T  VF+ E+LKL    I+  +     R+    + K I  N                 NNL
Sbjct: 63  TTSVFMMEILKLSFCLIIVLIETRSIRKTAKKLHKNIWQNWWETMKVSVPALVYAVQNNL 122

Query: 322 AFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDAST 501
            ++ L++ D T+Y + LQ R++ TA+L   L  K L+  QW++ G+  IG +   +    
Sbjct: 123 YYVALANIDATTYSVTLQLRILTTAILSVVLLSKKLSGYQWMAQGMALIGELFLKYKLDN 182

Query: 502 VNSKED--GNAW 531
            NS+ +  GN W
Sbjct: 183 SNSRREIAGNFW 194


>Z82288-8|CAB05329.3|  328|Caenorhabditis elegans Hypothetical
           protein M02B1.1 protein.
          Length = 328

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 37/182 (20%), Positives = 78/182 (42%), Gaps = 5/182 (2%)
 Frame = +1

Query: 151 TTLVVFLSELLKLIVSAILYTLGRENKPHIF-----KAIAINXXXXXXXXXXXXXXCFYN 315
           +T+ V+L+E++K  +   L+ + +E  P  F       I                    N
Sbjct: 34  STVAVWLTEVIKCFIC--LFLVAQEETPRRFIHALRTQILEQPYDTLKVCIPAMIYIVQN 91

Query: 316 NLAFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDA 495
           NL ++  SH D  ++ I  Q ++   A+    + ++ L   QW +L +L +G  +     
Sbjct: 92  NLFYVAASHLDAATFMITSQLKIFTAAIFTVIILRRSLNRTQWFALAVLFVGVSLVQLQG 151

Query: 496 STVNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYLD 675
           +        + +     + F+++      S  AG + E +L K  + V+++++NV M + 
Sbjct: 152 TKAKESSGESPF-----VGFVAVVVACCLSGFAGIYFEKIL-KGSAPVSLWMRNVQMAVF 205

Query: 676 SV 681
           S+
Sbjct: 206 SI 207


>Z81102-5|CAB03205.3|  328|Caenorhabditis elegans Hypothetical
           protein M02B1.1 protein.
          Length = 328

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 37/182 (20%), Positives = 78/182 (42%), Gaps = 5/182 (2%)
 Frame = +1

Query: 151 TTLVVFLSELLKLIVSAILYTLGRENKPHIF-----KAIAINXXXXXXXXXXXXXXCFYN 315
           +T+ V+L+E++K  +   L+ + +E  P  F       I                    N
Sbjct: 34  STVAVWLTEVIKCFIC--LFLVAQEETPRRFIHALRTQILEQPYDTLKVCIPAMIYIVQN 91

Query: 316 NLAFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDA 495
           NL ++  SH D  ++ I  Q ++   A+    + ++ L   QW +L +L +G  +     
Sbjct: 92  NLFYVAASHLDAATFMITSQLKIFTAAIFTVIILRRSLNRTQWFALAVLFVGVSLVQLQG 151

Query: 496 STVNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYLD 675
           +        + +     + F+++      S  AG + E +L K  + V+++++NV M + 
Sbjct: 152 TKAKESSGESPF-----VGFVAVVVACCLSGFAGIYFEKIL-KGSAPVSLWMRNVQMAVF 205

Query: 676 SV 681
           S+
Sbjct: 206 SI 207


>Z82288-7|CAB05326.1|  390|Caenorhabditis elegans Hypothetical
           protein ZK896.9 protein.
          Length = 390

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 4/129 (3%)
 Frame = +1

Query: 154 TLVVFLSELLKLIVSAILYTLGRENKPHIFKAIA----INXXXXXXXXXXXXXXCFYNNL 321
           T+ V   E+ K  VS +L  +  ++     + I     +N                 N L
Sbjct: 42  TITVLFGEIFKCTVSLLLACIEEKSIAKGLRKIHHEFFVNWRDTLKVLVPSAIYTVQNFL 101

Query: 322 AFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDAST 501
            ++ + +    +Y +  Q +++ TA     +  + LT  QWISL +L  G ++  +D   
Sbjct: 102 LYVAVDNLPAATYMVTYQLKILTTAAFTVLVLHRRLTIQQWISLFVLFAGVVVVQYDQKM 161

Query: 502 VNSKEDGNA 528
            N +E   A
Sbjct: 162 SNEREKAAA 170


>Z83125-7|CAB05619.1|  407|Caenorhabditis elegans Hypothetical
           protein T15D6.9 protein.
          Length = 407

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 3/122 (2%)
 Frame = +1

Query: 310 YNNLAFIN--LSHYDPTSYYILLQFRVVLTA-LLFQFLFKKDLTFIQWISLGILTIGCMI 480
           ++N A +N  L  + PTS   LL+ R  + A L+F    +  +   +W+ L  LT  CM 
Sbjct: 225 HSNFAVLNPKLLKFFPTSSLELLKQRTQVQAGLIFLARTRYTMKLFKWMVLCALTEDCMN 284

Query: 481 KNFDASTVNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNV 660
                S      D N +      Y  SI      +   G    Y  K   S V + + N+
Sbjct: 285 PPGSQSICIFLHDWNKYYADCFRYDQSIINLLLVNDFTGIHKYYSEKLSSSFVKVIILNI 344

Query: 661 FM 666
            +
Sbjct: 345 IL 346


>AC006722-6|AAK68411.2|  488|Caenorhabditis elegans Hypothetical
           protein Y19D10A.11 protein.
          Length = 488

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 304 CFYNNLAFINLSHYDPTSYYILLQFRVVLTALL 402
           CF  N+AF  LS Y PT    +L+F V  T  L
Sbjct: 294 CFGGNMAFFALSLYGPTYLREILKFDVRETGFL 326


>AC006645-11|AAF39850.1|  472|Caenorhabditis elegans Hypothetical
           protein F56A4.12 protein.
          Length = 472

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 304 CFYNNLAFINLSHYDPTSYYILLQFRVVLTALL 402
           CF  N+AF  LS Y PT    +L+F V  T  L
Sbjct: 278 CFGGNMAFFALSLYGPTYLREILKFDVRETGFL 310


>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
 Frame = -3

Query: 524 LPSSLE----FTVDASKFLIMHPIVKIPK-DIHCM 435
           LP+S E    + VD +  LI HP ++IPK ++HC+
Sbjct: 494 LPTSSEQMYGYIVDNNGMLIYHPQLQIPKTEVHCV 528


>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
 Frame = -3

Query: 524 LPSSLE----FTVDASKFLIMHPIVKIPK-DIHCM 435
           LP+S E    + VD +  LI HP ++IPK ++HC+
Sbjct: 494 LPTSSEQMYGYIVDNNGMLIYHPQLQIPKTEVHCV 528


>Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
 Frame = -3

Query: 524 LPSSLE----FTVDASKFLIMHPIVKIPK-DIHCM 435
           LP+S E    + VD +  LI HP ++IPK ++HC+
Sbjct: 494 LPTSSEQMYGYIVDNNGMLIYHPQLQIPKTEVHCV 528


>Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
 Frame = -3

Query: 524 LPSSLE----FTVDASKFLIMHPIVKIPK-DIHCM 435
           LP+S E    + VD +  LI HP ++IPK ++HC+
Sbjct: 494 LPTSSEQMYGYIVDNNGMLIYHPQLQIPKTEVHCV 528


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,095,975
Number of Sequences: 27780
Number of extensions: 346489
Number of successful extensions: 880
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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