BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_G23
(814 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045639-3|AAL11098.1| 383|Caenorhabditis elegans Hypothetical ... 69 4e-12
AF045639-2|AAC02568.2| 382|Caenorhabditis elegans Hypothetical ... 69 4e-12
AF324489-1|AAK49910.1| 351|Caenorhabditis elegans F44C8.7-like ... 68 9e-12
AF016438-4|AAB65894.2| 351|Caenorhabditis elegans Hypothetical ... 68 9e-12
AF324488-1|AAK49909.1| 314|Caenorhabditis elegans B0212.4-like ... 66 4e-11
AF045639-4|AAV58895.1| 313|Caenorhabditis elegans Hypothetical ... 66 4e-11
AF003383-2|AAB54235.2| 344|Caenorhabditis elegans Hypothetical ... 60 2e-09
AF024500-3|AAB70363.1| 314|Caenorhabditis elegans Hypothetical ... 58 6e-09
Z82288-8|CAB05329.3| 328|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z81102-5|CAB03205.3| 328|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z82288-7|CAB05326.1| 390|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z83125-7|CAB05619.1| 407|Caenorhabditis elegans Hypothetical pr... 29 5.2
AC006722-6|AAK68411.2| 488|Caenorhabditis elegans Hypothetical ... 29 5.2
AC006645-11|AAF39850.1| 472|Caenorhabditis elegans Hypothetical... 29 5.2
Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p... 28 6.9
Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p... 28 6.9
>AF045639-3|AAL11098.1| 383|Caenorhabditis elegans Hypothetical
protein B0212.4b protein.
Length = 383
Score = 68.9 bits (161), Expect = 4e-12
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 8/228 (3%)
Frame = +1
Query: 154 TLVVFLSELLKLIVSAI--LYTLGRENKP--HIFKAIAINXXXXXXXXXXXXXXCFYNNL 321
T VF+ E+LKL I L+ G K + K I N NNL
Sbjct: 65 TTSVFMMEVLKLGFCLIITLFKSGSIKKTCHELHKTIWQNRLETMKVAVPAVVYAIQNNL 124
Query: 322 AFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDAST 501
+I L++ DPT+Y + LQ R++ TA L L K L++ QW + + +G +I D +
Sbjct: 125 YYIALANVDPTTYSVTLQIRILTTAALSVCLLNKKLSWYQWGAQVMALLGVVIVQLDKTN 184
Query: 502 VNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYLDSV 681
+ + GN W V + + + S AG + E +LK S ++++QN+ + + ++
Sbjct: 185 SHKEAVGNFWIGVSAVVGMC-----WTSAFAGVYFEKMLK--NSSADVWIQNIRLSILTL 237
Query: 682 LCNXIVLL-LKGEL---GAIFEDFNSLYDIFVILIIVNSAIXGIVTSF 813
I ++ GE G +FE ++++ + IL V +V +
Sbjct: 238 FFAGITMITTDGEAVFGGRMFEGWSNMVWLVTILNSVGGLCISLVMKY 285
>AF045639-2|AAC02568.2| 382|Caenorhabditis elegans Hypothetical
protein B0212.4a protein.
Length = 382
Score = 68.9 bits (161), Expect = 4e-12
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 8/228 (3%)
Frame = +1
Query: 154 TLVVFLSELLKLIVSAI--LYTLGRENKP--HIFKAIAINXXXXXXXXXXXXXXCFYNNL 321
T VF+ E+LKL I L+ G K + K I N NNL
Sbjct: 64 TTSVFMMEVLKLGFCLIITLFKSGSIKKTCHELHKTIWQNRLETMKVAVPAVVYAIQNNL 123
Query: 322 AFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDAST 501
+I L++ DPT+Y + LQ R++ TA L L K L++ QW + + +G +I D +
Sbjct: 124 YYIALANVDPTTYSVTLQIRILTTAALSVCLLNKKLSWYQWGAQVMALLGVVIVQLDKTN 183
Query: 502 VNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYLDSV 681
+ + GN W V + + + S AG + E +LK S ++++QN+ + + ++
Sbjct: 184 SHKEAVGNFWIGVSAVVGMC-----WTSAFAGVYFEKMLK--NSSADVWIQNIRLSILTL 236
Query: 682 LCNXIVLL-LKGEL---GAIFEDFNSLYDIFVILIIVNSAIXGIVTSF 813
I ++ GE G +FE ++++ + IL V +V +
Sbjct: 237 FFAGITMITTDGEAVFGGRMFEGWSNMVWLVTILNSVGGLCISLVMKY 284
>AF324489-1|AAK49910.1| 351|Caenorhabditis elegans F44C8.7-like
protein protein.
Length = 351
Score = 67.7 bits (158), Expect = 9e-12
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 4/188 (2%)
Frame = +1
Query: 154 TLVVFLSELLKLIVSAILYTLGREN----KPHIFKAIAINXXXXXXXXXXXXXXCFYNNL 321
T VF+ E+LKL+ I+ ++ +++ I N NNL
Sbjct: 61 TTSVFMMEVLKLLFCLIIVLFKTKSFEKTGKKLYEHIWKNRVETLKVSVPAVVYAIQNNL 120
Query: 322 AFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDAST 501
+I L++ D T+Y + +Q R++ TALL + + L+ QW++ G+ IG ++ D S
Sbjct: 121 YYIALANIDATTYSVTVQLRILTTALLSVIILNQKLSNYQWLAQGMALIGVVLVQIDNSN 180
Query: 502 VNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYLDSV 681
+ K GN W + ++ + + S AG + E +LK+ S ++++QN+ + ++
Sbjct: 181 PHGKVFGNFWLGITAVFGMC-----WTSGFAGVYFEKMLKE--SSADVWVQNIRLSTLTL 233
Query: 682 LCNXIVLL 705
L I +L
Sbjct: 234 LFAGITML 241
>AF016438-4|AAB65894.2| 351|Caenorhabditis elegans Hypothetical
protein F44C8.7 protein.
Length = 351
Score = 67.7 bits (158), Expect = 9e-12
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 4/188 (2%)
Frame = +1
Query: 154 TLVVFLSELLKLIVSAILYTLGREN----KPHIFKAIAINXXXXXXXXXXXXXXCFYNNL 321
T VF+ E+LKL+ I+ ++ +++ I N NNL
Sbjct: 61 TTSVFMMEVLKLLFCLIIVLFKTKSFEKTGKKLYEHIWKNRVETLKVSVPAVVYAIQNNL 120
Query: 322 AFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDAST 501
+I L++ D T+Y + +Q R++ TALL + + L+ QW++ G+ IG ++ D S
Sbjct: 121 YYIALANIDATTYSVTVQLRILTTALLSVIILNQKLSNYQWLAQGMALIGVVLVQIDNSN 180
Query: 502 VNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYLDSV 681
+ K GN W + ++ + + S AG + E +LK+ S ++++QN+ + ++
Sbjct: 181 PHGKVFGNFWLGITAVFGMC-----WTSGFAGVYFEKMLKE--SSADVWVQNIRLSTLTL 233
Query: 682 LCNXIVLL 705
L I +L
Sbjct: 234 LFAGITML 241
>AF324488-1|AAK49909.1| 314|Caenorhabditis elegans B0212.4-like
protein protein.
Length = 314
Score = 65.7 bits (153), Expect = 4e-11
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
Frame = +1
Query: 313 NNLAFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFD 492
NNL +I L++ DPT+Y + LQ R++ TA L L K L++ QW + + +G +I D
Sbjct: 53 NNLYYIALANVDPTTYSVTLQIRILTTAALSVCLLNKKLSWYQWGAQVMALLGVVIVQLD 112
Query: 493 ASTVNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYL 672
+ + + GN W V + + + S AG + E +LK S ++++QN+ + +
Sbjct: 113 KTNSHKEAVGNFWIGVSAVVGMC-----WTSAFAGVYFEKMLK--NSSADVWIQNIRLSI 165
Query: 673 DSVLCNXIVLL-LKGEL---GAIFEDFNSLYDIFVILIIVNSAIXGIVTSF 813
++ I ++ GE G +FE ++++ + IL V +V +
Sbjct: 166 LTLFFAGITMITTDGEAVFGGRMFEGWSNMVWLVTILNSVGGLCISLVMKY 216
>AF045639-4|AAV58895.1| 313|Caenorhabditis elegans Hypothetical
protein B0212.4c protein.
Length = 313
Score = 65.7 bits (153), Expect = 4e-11
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
Frame = +1
Query: 313 NNLAFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFD 492
NNL +I L++ DPT+Y + LQ R++ TA L L K L++ QW + + +G +I D
Sbjct: 52 NNLYYIALANVDPTTYSVTLQIRILTTAALSVCLLNKKLSWYQWGAQVMALLGVVIVQLD 111
Query: 493 ASTVNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYL 672
+ + + GN W V + + + S AG + E +LK S ++++QN+ + +
Sbjct: 112 KTNSHKEAVGNFWIGVSAVVGMC-----WTSAFAGVYFEKMLK--NSSADVWIQNIRLSI 164
Query: 673 DSVLCNXIVLL-LKGEL---GAIFEDFNSLYDIFVILIIVNSAIXGIVTSF 813
++ I ++ GE G +FE ++++ + IL V +V +
Sbjct: 165 LTLFFAGITMITTDGEAVFGGRMFEGWSNMVWLVTILNSVGGLCISLVMKY 215
>AF003383-2|AAB54235.2| 344|Caenorhabditis elegans Hypothetical
protein ZC250.3 protein.
Length = 344
Score = 59.7 bits (138), Expect = 2e-09
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 4/224 (1%)
Frame = +1
Query: 151 TTLVVFLSELLKLIV-SAILYTLGRENKPHIFK---AIAINXXXXXXXXXXXXXXCFYNN 318
TT+ VF+ E++K++V SAI+ + +I + AI + NN
Sbjct: 43 TTVNVFMMEIIKVVVCSAIMIYTTKSVMKYINELKLAIFEHRSETLKVCIPALIYTLQNN 102
Query: 319 LAFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDAS 498
L +I LSH + T++ I Q ++ TA+ F K L+ QW +L +L +G + S
Sbjct: 103 LYYIALSHLEATTFCISYQMKIFTTAIFMYFFLGKKLSTKQWWALVLLVLGVADIQYVYS 162
Query: 499 TVNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYLDS 678
+ ED Q F+++ F S AG + E +LK S+ +I++QN+ + L
Sbjct: 163 PPPASED---VEQNPMYGFMAVLTMCFTSAFAGVYLEKVLK--SSNASIWVQNIRLALIG 217
Query: 679 VLCNXIVLLLKGELGAIFEDFNSLYDIFVILIIVNSAIXGIVTS 810
+ + + + + +D V+ + V +++ GI+ S
Sbjct: 218 LPISFLSMWYYDWEKINEQGAFRGWDFVVVCLTVTNSVGGILIS 261
>AF024500-3|AAB70363.1| 314|Caenorhabditis elegans Hypothetical
protein K06H6.3 protein.
Length = 314
Score = 58.4 bits (135), Expect = 6e-09
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Frame = +1
Query: 154 TLVVFLSELLKLIVSAILYTLG----RENKPHIFKAIAINXXXXXXXXXXXXXXCFYNNL 321
T VF+ E+LKL I+ + R+ + K I N NNL
Sbjct: 63 TTSVFMMEILKLSFCLIIVLIETRSIRKTAKKLHKNIWQNWWETMKVSVPALVYAVQNNL 122
Query: 322 AFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDAST 501
++ L++ D T+Y + LQ R++ TA+L L K L+ QW++ G+ IG + +
Sbjct: 123 YYVALANIDATTYSVTLQLRILTTAILSVVLLSKKLSGYQWMAQGMALIGELFLKYKLDN 182
Query: 502 VNSKED--GNAW 531
NS+ + GN W
Sbjct: 183 SNSRREIAGNFW 194
>Z82288-8|CAB05329.3| 328|Caenorhabditis elegans Hypothetical
protein M02B1.1 protein.
Length = 328
Score = 45.6 bits (103), Expect = 4e-05
Identities = 37/182 (20%), Positives = 78/182 (42%), Gaps = 5/182 (2%)
Frame = +1
Query: 151 TTLVVFLSELLKLIVSAILYTLGRENKPHIF-----KAIAINXXXXXXXXXXXXXXCFYN 315
+T+ V+L+E++K + L+ + +E P F I N
Sbjct: 34 STVAVWLTEVIKCFIC--LFLVAQEETPRRFIHALRTQILEQPYDTLKVCIPAMIYIVQN 91
Query: 316 NLAFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDA 495
NL ++ SH D ++ I Q ++ A+ + ++ L QW +L +L +G +
Sbjct: 92 NLFYVAASHLDAATFMITSQLKIFTAAIFTVIILRRSLNRTQWFALAVLFVGVSLVQLQG 151
Query: 496 STVNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYLD 675
+ + + + F+++ S AG + E +L K + V+++++NV M +
Sbjct: 152 TKAKESSGESPF-----VGFVAVVVACCLSGFAGIYFEKIL-KGSAPVSLWMRNVQMAVF 205
Query: 676 SV 681
S+
Sbjct: 206 SI 207
>Z81102-5|CAB03205.3| 328|Caenorhabditis elegans Hypothetical
protein M02B1.1 protein.
Length = 328
Score = 45.6 bits (103), Expect = 4e-05
Identities = 37/182 (20%), Positives = 78/182 (42%), Gaps = 5/182 (2%)
Frame = +1
Query: 151 TTLVVFLSELLKLIVSAILYTLGRENKPHIF-----KAIAINXXXXXXXXXXXXXXCFYN 315
+T+ V+L+E++K + L+ + +E P F I N
Sbjct: 34 STVAVWLTEVIKCFIC--LFLVAQEETPRRFIHALRTQILEQPYDTLKVCIPAMIYIVQN 91
Query: 316 NLAFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDA 495
NL ++ SH D ++ I Q ++ A+ + ++ L QW +L +L +G +
Sbjct: 92 NLFYVAASHLDAATFMITSQLKIFTAAIFTVIILRRSLNRTQWFALAVLFVGVSLVQLQG 151
Query: 496 STVNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNVFMYLD 675
+ + + + F+++ S AG + E +L K + V+++++NV M +
Sbjct: 152 TKAKESSGESPF-----VGFVAVVVACCLSGFAGIYFEKIL-KGSAPVSLWMRNVQMAVF 205
Query: 676 SV 681
S+
Sbjct: 206 SI 207
>Z82288-7|CAB05326.1| 390|Caenorhabditis elegans Hypothetical
protein ZK896.9 protein.
Length = 390
Score = 41.9 bits (94), Expect = 5e-04
Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 4/129 (3%)
Frame = +1
Query: 154 TLVVFLSELLKLIVSAILYTLGRENKPHIFKAIA----INXXXXXXXXXXXXXXCFYNNL 321
T+ V E+ K VS +L + ++ + I +N N L
Sbjct: 42 TITVLFGEIFKCTVSLLLACIEEKSIAKGLRKIHHEFFVNWRDTLKVLVPSAIYTVQNFL 101
Query: 322 AFINLSHYDPTSYYILLQFRVVLTALLFQFLFKKDLTFIQWISLGILTIGCMIKNFDAST 501
++ + + +Y + Q +++ TA + + LT QWISL +L G ++ +D
Sbjct: 102 LYVAVDNLPAATYMVTYQLKILTTAAFTVLVLHRRLTIQQWISLFVLFAGVVVVQYDQKM 161
Query: 502 VNSKEDGNA 528
N +E A
Sbjct: 162 SNEREKAAA 170
>Z83125-7|CAB05619.1| 407|Caenorhabditis elegans Hypothetical
protein T15D6.9 protein.
Length = 407
Score = 28.7 bits (61), Expect = 5.2
Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 3/122 (2%)
Frame = +1
Query: 310 YNNLAFIN--LSHYDPTSYYILLQFRVVLTA-LLFQFLFKKDLTFIQWISLGILTIGCMI 480
++N A +N L + PTS LL+ R + A L+F + + +W+ L LT CM
Sbjct: 225 HSNFAVLNPKLLKFFPTSSLELLKQRTQVQAGLIFLARTRYTMKLFKWMVLCALTEDCMN 284
Query: 481 KNFDASTVNSKEDGNAWSQVLNIYFLSINFQNFCSCLAGTFNEYLLKKQGSHVNIFLQNV 660
S D N + Y SI + G Y K S V + + N+
Sbjct: 285 PPGSQSICIFLHDWNKYYADCFRYDQSIINLLLVNDFTGIHKYYSEKLSSSFVKVIILNI 344
Query: 661 FM 666
+
Sbjct: 345 IL 346
>AC006722-6|AAK68411.2| 488|Caenorhabditis elegans Hypothetical
protein Y19D10A.11 protein.
Length = 488
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 304 CFYNNLAFINLSHYDPTSYYILLQFRVVLTALL 402
CF N+AF LS Y PT +L+F V T L
Sbjct: 294 CFGGNMAFFALSLYGPTYLREILKFDVRETGFL 326
>AC006645-11|AAF39850.1| 472|Caenorhabditis elegans Hypothetical
protein F56A4.12 protein.
Length = 472
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 304 CFYNNLAFINLSHYDPTSYYILLQFRVVLTALL 402
CF N+AF LS Y PT +L+F V T L
Sbjct: 278 CFGGNMAFFALSLYGPTYLREILKFDVRETGFL 310
>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6a protein.
Length = 1067
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
Frame = -3
Query: 524 LPSSLE----FTVDASKFLIMHPIVKIPK-DIHCM 435
LP+S E + VD + LI HP ++IPK ++HC+
Sbjct: 494 LPTSSEQMYGYIVDNNGMLIYHPQLQIPKTEVHCV 528
>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6b protein.
Length = 1067
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
Frame = -3
Query: 524 LPSSLE----FTVDASKFLIMHPIVKIPK-DIHCM 435
LP+S E + VD + LI HP ++IPK ++HC+
Sbjct: 494 LPTSSEQMYGYIVDNNGMLIYHPQLQIPKTEVHCV 528
>Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6a protein.
Length = 1067
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
Frame = -3
Query: 524 LPSSLE----FTVDASKFLIMHPIVKIPK-DIHCM 435
LP+S E + VD + LI HP ++IPK ++HC+
Sbjct: 494 LPTSSEQMYGYIVDNNGMLIYHPQLQIPKTEVHCV 528
>Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6b protein.
Length = 1067
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
Frame = -3
Query: 524 LPSSLE----FTVDASKFLIMHPIVKIPK-DIHCM 435
LP+S E + VD + LI HP ++IPK ++HC+
Sbjct: 494 LPTSSEQMYGYIVDNNGMLIYHPQLQIPKTEVHCV 528
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,095,975
Number of Sequences: 27780
Number of extensions: 346489
Number of successful extensions: 880
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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