Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_G20
(851 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10010| Best HMM Match : HLH (HMM E-Value=8.5e-09) 54 2e-07
SB_30776| Best HMM Match : HLH (HMM E-Value=1.7e-13) 42 6e-04
SB_56922| Best HMM Match : HLH (HMM E-Value=1.9e-21) 42 8e-04
SB_40771| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006
SB_20446| Best HMM Match : HLH (HMM E-Value=1.26117e-44) 39 0.006
SB_40437| Best HMM Match : VapD_N (HMM E-Value=2.4) 37 0.018
SB_9980| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.055
SB_59476| Best HMM Match : HLH (HMM E-Value=1.2e-15) 35 0.096
SB_25662| Best HMM Match : HLH (HMM E-Value=2.3e-14) 34 0.13
SB_15721| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_7690| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0) 31 0.90
SB_38739| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_27282| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14) 31 0.90
SB_5702| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_48325| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_43750| Best HMM Match : NAP (HMM E-Value=3.3) 30 2.1
SB_23535| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_11304| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_44231| Best HMM Match : Ion_trans_2 (HMM E-Value=6.5e-09) 30 2.7
SB_3318| Best HMM Match : Xan_ur_permease (HMM E-Value=7.20267e-43) 30 2.7
SB_49930| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_38740| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0) 29 4.8
SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 29 6.3
SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5) 29 6.3
SB_39750| Best HMM Match : Borrelia_orfA (HMM E-Value=1.1) 29 6.3
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_1992| Best HMM Match : Geminin (HMM E-Value=0.0018) 29 6.3
SB_41073| Best HMM Match : GRP (HMM E-Value=2.8) 28 8.4
SB_49776| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_23116| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_10010| Best HMM Match : HLH (HMM E-Value=8.5e-09)
Length = 227
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = +1
Query: 430 FKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQQSDASGYKPSKAAVLQKSIDYIQYL 609
+KE RR +H AEQKRR IK G+D L +VPT +S K SKA VLQK+ + +
Sbjct: 16 YKEHRRMSHISAEQKRRCNIKMGFDQLASMVPTLASQKSS--KVSKATVLQKNDNMVHLC 73
Query: 610 L 612
L
Sbjct: 74 L 74
>SB_30776| Best HMM Match : HLH (HMM E-Value=1.7e-13)
Length = 1217
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +1
Query: 364 SSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQQSD 543
S +N T S + ++ + RRR H + E++R+D I L ++VP C +
Sbjct: 112 SPTNNKTPYYISSDIVLSGGIAQQTRRRIVHNEVERRRKDKINNWITKLAEVVPDCARG- 170
Query: 544 ASGYKPSKAAVLQKSIDYIQ 603
K SK VL+KS++Y++
Sbjct: 171 ----KQSKNIVLEKSVEYLK 186
>SB_56922| Best HMM Match : HLH (HMM E-Value=1.9e-21)
Length = 157
Score = 41.5 bits (93), Expect = 8e-04
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Frame = +1
Query: 367 SSNQNTEDEDDSGDNK---ASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQQ 537
S +Q+T+D +D G + L+ ++R + E+KR + ++ L++ +P
Sbjct: 4 SESQSTDDIEDQGATSELDSPELADTPKKRYTANRKERKRTQTMNTAFEDLRNHIPNVPP 63
Query: 538 SDASGYKPSKAAVLQKSIDYIQYLLXXXXXXXXXXNALRKDVVALRIMQANYEQIVKAQH 717
K SK L+ +I YI+YL+ +R++ V +Q++ ++ K +
Sbjct: 64 DT----KLSKIKTLRLAISYIRYLMDILEESKDGKPRVRRNFVVEMALQSDMKEKRKREQ 119
Query: 718 SVPGLN 735
SV +N
Sbjct: 120 SVHYIN 125
>SB_40771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 358 TPSSSNQNTEDEDDSGDNKASAL-SFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQ 534
TP S+ + + + + ++ S S R+EAH + E+KRR+ I + + L+ ++P+C
Sbjct: 452 TPRSTKRKRDSINSAVNHSTSKTPSTPAERKEAHLEKERKRRERIARSWFLLRSMIPSC- 510
Query: 535 QSDASGYKPSKAAVLQKSIDYIQY 606
SD + KA V + ++ YI +
Sbjct: 511 -SDTA----DKATVFEMTVAYIHH 529
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +1
Query: 445 REAHTQAEQKRRDAIKKGYDSLQDLVPTCQQSDASGYKPSKAAVLQKSIDYIQYL 609
RE H++ E++RR+ + + L D+VP+C KP K VL+ +++Y++ L
Sbjct: 14 RENHSEIERRRRNKMNAYINELSDMVPSC---TGLARKPDKLTVLRMAVNYMKTL 65
>SB_20446| Best HMM Match : HLH (HMM E-Value=1.26117e-44)
Length = 424
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 433 KERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQQSDASGYKPSKAAVLQKSIDYI 600
K RRE E++R +I G+ +L+ L+P + G K SKAA+LQ++ +YI
Sbjct: 41 KRLRREIANSNERRRMQSINSGFQALRMLIP-----NTEGEKLSKAAILQQTSEYI 91
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 433 KERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQQSDASGYKPSKAAVLQKSIDYI 600
K RRE E++R +I G+ +L+ L+P + G K SKAA+LQ++ +YI
Sbjct: 208 KRLRREIANSNERRRMQSINSGFQALRMLIP-----NTEGEKLSKAAILQQTSEYI 258
>SB_40437| Best HMM Match : VapD_N (HMM E-Value=2.4)
Length = 89
Score = 37.1 bits (82), Expect = 0.018
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 586 SIDYIQYLLXXXXXXXXXXNALRKDVVALRIMQANYEQIVKAQHSVPGLNEQRLTDQDKF 765
+I+Y+ ++ LRK+V+AL+IM+ NYEQI +A H+ D+F
Sbjct: 5 AIEYVSFMHHQRKKHEEELEKLRKEVLALKIMKQNYEQIARA-HA------------DQF 51
Query: 766 QVGIMDKLFESFE-SVPTNDF 825
+ I+D F +F+ +V NDF
Sbjct: 52 K-AILDNQFVTFDGTVVVNDF 71
>SB_9980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 35.5 bits (78), Expect = 0.055
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1
Query: 418 SALSFKERRREAHTQAEQKRRDAIK 492
S+ S K+ RR AH+ AEQKRRDAIK
Sbjct: 34 SSSSSKQNRRFAHSVAEQKRRDAIK 58
>SB_59476| Best HMM Match : HLH (HMM E-Value=1.2e-15)
Length = 272
Score = 34.7 bits (76), Expect = 0.096
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +1
Query: 442 RREAHTQAEQKRRDAIKKGYDSLQDLVPTCQQSDASGYKPSKAAVLQKSIDYIQYL 609
R+ E+KRRD I + L+ LVPT + + S K KA +L +++++++L
Sbjct: 12 RKRRRGLIEKKRRDRINRCLVELRRLVPTALEKEGSS-KLEKAEILHLTVEHLKWL 66
>SB_25662| Best HMM Match : HLH (HMM E-Value=2.3e-14)
Length = 468
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 439 RRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQQSDASGYKPSKAAVLQKSIDYIQ 603
RRR ++E++RRD + L +VP C +S K K VLQ +++Y++
Sbjct: 137 RRRTTRNESEKRRRDKLNVYITELAAMVPMCA---SSRKKLDKTTVLQMAVNYMK 188
>SB_15721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = +1
Query: 397 DSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQQSDASGYKPSKAAV 576
DSGD+K K ++ H++ E++RRD + + L ++P C +A K K V
Sbjct: 172 DSGDSKGFQ---KGAIKQNHSEIEKRRRDKMNTYINELSTMIPMC---NAMSRKLDKLTV 225
Query: 577 LQKSIDYIQYL 609
L+ ++ +++ L
Sbjct: 226 LRMAVQHMRAL 236
>SB_7690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 430
Score = 32.3 bits (70), Expect = 0.51
Identities = 24/82 (29%), Positives = 40/82 (48%)
Frame = +1
Query: 364 SSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQQSD 543
S S + E E+DS E R H E+KRR+ +K + L+D VP + ++
Sbjct: 332 SGSGDSDESENDS-----------EYTRATHNVLERKRRNDLKLKFQKLRDAVPELKDNE 380
Query: 544 ASGYKPSKAAVLQKSIDYIQYL 609
+ K ++L+KS ++I L
Sbjct: 381 ----RAPKVSILRKSWEHIVQL 398
>SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 709
Score = 31.5 bits (68), Expect = 0.90
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 356 KRRPPQIKTQRMKMTVVTTRHLHSVSKREEGKLTHRQSRKEEMQLRKAMIHSKTLCLLVS 535
+ R P+ T + M + TRH H+V + L+ R + E + KT CL
Sbjct: 150 RNRKPEQGTGKRNMMLAETRHTHAVPSSQAPALSSRHRKPEIKKSHSPNKRLKTRCLHAC 209
Query: 536 RVMRLATN-QAKLQSFRNQ 589
R +N +AK + + +
Sbjct: 210 RGSYSGSNPEAKTEKKKRE 228
>SB_38739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 31.5 bits (68), Expect = 0.90
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 397 DSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQQSDASGYKP-SKAA 573
DS D + LS +RR+ E+ RR I + L+ LV DAS Y KA
Sbjct: 7 DSSDYVSKILS--DRRKAKKPMMEKLRRARINDSLNELKVLVLELLNKDASRYSKMEKAD 64
Query: 574 VLQKSIDYIQ 603
+L+ ++ Y++
Sbjct: 65 ILEMTVGYLR 74
>SB_27282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 644
Score = 31.5 bits (68), Expect = 0.90
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +1
Query: 358 TPSSS-NQNTEDEDDSGDNKASA 423
TPSSS N +T+D+DD DNK +A
Sbjct: 494 TPSSSDNDDTQDDDDKSDNKPNA 516
>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
Length = 856
Score = 31.5 bits (68), Expect = 0.90
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = -3
Query: 567 FAWFVARRITLLTSRH--KVLE*IIAFLNCISSFLLCLCVSFPSSLFETECRCL 412
F F+++ + L+ H ++ LNC +++ +C+C + S+++E+ RCL
Sbjct: 610 FQEFISKTVVLIPRIHYLSLVTYTKLSLNCQTNYFVCICDARESTIYESLSRCL 663
>SB_5702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 325 GSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQ 471
G S SI +Q P Q+ +D +D D+ A+ SF+ +AH A Q
Sbjct: 2 GHSASIAKKYQAPK---QHVDDTNDEVDSLATVSSFRPTSPDAHNDARQ 47
>SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 331 SGSIQNIHQTPSSSNQNTEDEDDSGDNKA 417
SG+++ QTPS +N NT DSG A
Sbjct: 4 SGALKEEQQTPSDTNNNTNGSSDSGGGGA 32
>SB_48325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 872
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 454 HTQAEQKRRDAIKKGYDSLQDLVPTCQQSDASGYKPSKAAVLQKSIDYIQ 603
H Q + + + + D +++ P Q+S + KPS A + +K+IDY Q
Sbjct: 78 HNQDRRDKSNNDRTKKDKVEERPPNLQKSFSDFSKPSVAVLKRKAIDYAQ 127
>SB_43750| Best HMM Match : NAP (HMM E-Value=3.3)
Length = 514
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 322 CGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKK 495
CGSSG + + P+ + E+ + S + + +R+RE Q EQ+R+ A++K
Sbjct: 437 CGSSGRKKRQAEMPAPVSTVQEETERSINMCPPGIWVCDRKRELKRQREQRRQAAMEK 494
>SB_23535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 355 QTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQ 534
Q + + TE E+D D K S ++RRRE I + + L+ LV Q
Sbjct: 3 QDSAKDEKMTEAENDIDDRKWSKPVMEKRRRE-----------RINRSLEELKRLVLEAQ 51
Query: 535 QSDASGY-KPSKAAVLQKSIDYIQYL 609
D S Y K KA +L+ ++ +++ L
Sbjct: 52 HRDCSRYTKLEKADILEMTVKHLRTL 77
>SB_11304| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 420
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 364 SSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQQSD 543
+ S T++++++ + SA R A+++RR+ I+ D Q V + D
Sbjct: 245 TKSRDETDNKNETKADTESATGSAPRTTRKEPDAKEERREVIRDRGDGRQSRVRNKDRPD 304
Query: 544 ASGYKPSKA 570
Y+P +A
Sbjct: 305 REIYQPGRA 313
>SB_44231| Best HMM Match : Ion_trans_2 (HMM E-Value=6.5e-09)
Length = 441
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 331 SGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDA 486
S +++ HQ +S+ + + D A+ K+RR E QA +KR +A
Sbjct: 357 SSVVEDFHQNLTSTIERLRERHDQDMRNYIAILKKQRRNENKYQAYEKREEA 408
>SB_3318| Best HMM Match : Xan_ur_permease (HMM E-Value=7.20267e-43)
Length = 774
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +1
Query: 247 KIALM*CFILLKFHYNN*YPNMYPRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDN 411
K+ L+ +LL ++ NN N ++ + N + +++N N +D+DD+ D+
Sbjct: 570 KLNLLLLLLLLLYNNNNDNNNNNNNNNNNNNNNNNNNNNNNNNNNADDDDDAADD 624
>SB_49930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 307 NMYPRCGSSGSIQNIHQTPSSSNQNTEDED 396
N +P G +GS+QNI QT SS +D
Sbjct: 187 NTHPLSGQTGSLQNIIQTKKSSTDYASRDD 216
>SB_38740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 436 ERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQQSDASGY-KPSKAAVLQKSIDYIQ 603
+RRR E+ RR+ I L+ LV + D S Y + KA +L+ ++ YI+
Sbjct: 21 KRRRIMKPITERLRRERINSSLKELKFLVLSALGQDVSRYSRMEKADILEMTVSYIR 77
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +1
Query: 352 HQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTC 531
++ P + ED+DD + S K R+ + E K+ KK + ++
Sbjct: 723 NKVPKVDKDDEEDDDDEEEESEEDESNKPSSRQVTAKKEDKKGKKKKKEEEEEEEEDQEE 782
Query: 532 QQSDASGYKPSK 567
+ D+SG K K
Sbjct: 783 EDEDSSGKKKGK 794
>SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0)
Length = 1127
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 361 PSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQ 513
P + N+ D+DD D F+ + ++ ++ K+R + KKG++ Q
Sbjct: 1038 PGAKNKKKHDDDDDDDEGGGDDKFEPKHKKKG-RSSSKKRHSRKKGHEEQQ 1087
>SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1143
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 355 QTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKK 495
+T S +T D D S D+ ++ S +ER + H + ++KR+ IKK
Sbjct: 745 ETKKSRKYSTTDSDCSSDDGENSDSSRERSIKKH-KKKKKRKKKIKK 790
>SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +3
Query: 69 KFXFSXTLRXCYVTTWFKSXLIRVMXYLSKPXLYL*CYQCILHTLHRNNGTRHHELRKVK 248
K F+ L + T + V+ Y+S + YQ I H N TR+H++ K
Sbjct: 253 KMEFTARLTLNWKFTHLDQRGLSVIGYMSNELVGSSLYQNI-HPNDLENITRYHKILVYK 311
Query: 249 DRINVMFY 272
R+N +Y
Sbjct: 312 GRVNTCYY 319
>SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5)
Length = 215
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 382 TEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDS 507
+ D DD K S+ S K+R R + +++ ++RR + + DS
Sbjct: 5 SSDSDDDRRRKRSSKSSKKRDRRSRSRSRERRRRSKSRDRDS 46
>SB_39750| Best HMM Match : Borrelia_orfA (HMM E-Value=1.1)
Length = 810
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1
Query: 361 PSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSL 510
PSS + S NK S +SF + + E+++++ + K Y ++
Sbjct: 371 PSSKSHKKSSSKSSSSNKLSKISFLRKLMDGKILTEEQKKEELAKLYAAI 420
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 28.7 bits (61), Expect = 6.3
Identities = 25/113 (22%), Positives = 49/113 (43%)
Frame = +1
Query: 403 GDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQQSDASGYKPSKAAVLQ 582
GD + S + + +T Q+ DA+++ YD+L+ + SD G + A L+
Sbjct: 3903 GDTSQAGHSIVDGNPDVNTAPVQREADALQERYDALKARI-----SDKRGKAAALVAGLE 3957
Query: 583 KSIDYIQYLLXXXXXXXXXXNALRKDVVALRIMQANYEQIVKAQHSVPGLNEQ 741
+ D + L + R V+ L ++A E+ K + ++ GL +
Sbjct: 3958 QYWDKEKELGQGMQGVREGLDENRPSVMDLDTLKAQLEKTKKLKGNLEGLTPE 4010
>SB_1992| Best HMM Match : Geminin (HMM E-Value=0.0018)
Length = 155
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 328 SSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQ-AEQKRRDAIKKGYD 504
SS S SSS Q T+D+ S ++A AL +E E++ Q ++RR A+++ +
Sbjct: 67 SSDSSDTESTKRSSSEQVTDDDKKSVSDEAFALMIQEPAPESYWQLLAEERRLALQETLE 126
Query: 505 SLQDLV 522
Q +V
Sbjct: 127 ENQRMV 132
>SB_41073| Best HMM Match : GRP (HMM E-Value=2.8)
Length = 305
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 319 RCGSSGSIQNIHQTPSSSNQNTEDEDDSGDN 411
R G +G Q H+ ++N N D D+ DN
Sbjct: 22 RKGGNGYFQTTHRELDNNNDNDNDNDNDNDN 52
>SB_49776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -3
Query: 474 FLLCLCVSFPSSLFE-TECRC 415
FLL +C SF SSLF T C+C
Sbjct: 17 FLLRICTSFGSSLFPGTSCQC 37
>SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +1
Query: 319 RCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRR 480
R G SG + ++ +SN T+ +DDS D K ++R+++ ++ E+KR+
Sbjct: 89 RWGHSG-YKELYPEEFASNF-TDSDDDSEDEKKKKKKTSKKRKKSSSKDERKRK 140
>SB_23116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +1
Query: 364 SSSNQNTEDE-DDSGDNKASALSFKERRREAHTQAEQKRRDAI----KKGYDSLQDLVPT 528
+++N + +DE DDS +N K R E + + E+ RR + ++ +DLV T
Sbjct: 160 NNNNNDDDDEDDDSNNNNNDYDDNKCNREERNNEEERSRRPRVLTEEQRARKRARDLVLT 219
Query: 529 CQQSDASGYKPSK 567
+Q G K S+
Sbjct: 220 EEQRVWKGQKDSE 232
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,939,363
Number of Sequences: 59808
Number of extensions: 466043
Number of successful extensions: 2007
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1968
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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