BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_G20
(851 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 29 0.14
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 25 2.2
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 25 2.2
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 25 2.2
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 25 3.9
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 24 5.1
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 24 5.1
AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein. 24 5.1
AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein. 24 5.1
AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein. 24 5.1
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 23 8.9
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s... 23 8.9
AJ420785-1|CAD12781.1| 379|Anopheles gambiae serpin protein. 23 8.9
AJ271352-1|CAB69784.1| 379|Anopheles gambiae putative serine pr... 23 8.9
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 8.9
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 29.5 bits (63), Expect = 0.14
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 427 SFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQQSDASGYKPSKAAVLQKS 588
+F REA +AE+ RRD + L +VP +S + K AVL+ S
Sbjct: 218 NFNRNGREARNRAEKNRRDKLNGSIQELSAMVPHVAESPR---RVDKTAVLRFS 268
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 25.4 bits (53), Expect = 2.2
Identities = 14/70 (20%), Positives = 33/70 (47%)
Frame = +1
Query: 328 SSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDS 507
SS + N + + S++N NT +++ +N +++ H Q E+ ++ ++ +
Sbjct: 196 SSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLERLQQQQQQQTHHQ 255
Query: 508 LQDLVPTCQQ 537
Q + QQ
Sbjct: 256 QQQHPSSHQQ 265
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 25.4 bits (53), Expect = 2.2
Identities = 14/70 (20%), Positives = 33/70 (47%)
Frame = +1
Query: 328 SSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDS 507
SS + N + + S++N NT +++ +N +++ H Q E+ ++ ++ +
Sbjct: 196 SSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLERLQQQQQQQTHHQ 255
Query: 508 LQDLVPTCQQ 537
Q + QQ
Sbjct: 256 QQQHPSSHQQ 265
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 25.4 bits (53), Expect = 2.2
Identities = 14/70 (20%), Positives = 33/70 (47%)
Frame = +1
Query: 328 SSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDS 507
SS + N + + S++N NT +++ +N +++ H Q E+ ++ ++ +
Sbjct: 148 SSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLERLQQQQQQQTHHQ 207
Query: 508 LQDLVPTCQQ 537
Q + QQ
Sbjct: 208 QQQHPSSHQQ 217
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 24.6 bits (51), Expect = 3.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 750 RQPLLIQTRYGMLSFNNLFIIC 685
R PL I+TR+ + +FN+ + C
Sbjct: 924 RDPLSIETRHTLYTFNDPILSC 945
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 24.2 bits (50), Expect = 5.1
Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Frame = +1
Query: 328 SSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDS 507
SS + N + + ++N NT +++ +N +++ H Q E+ ++ ++ +
Sbjct: 196 SSNNSNNNNNSSGNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLERLQQQQQQQTHHQ 255
Query: 508 LQDLVPTCQQS-----DASGYKPSKAAVLQKSIDYIQYLL 612
Q + QQ + +PS++A SID +Q L
Sbjct: 256 QQQHPSSHQQQSQQHPSSQHQQPSRSA----SIDLMQSAL 291
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 24.2 bits (50), Expect = 5.1
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +1
Query: 364 SSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQ 471
SSS++++ D+S D+ +S+ ++ RE + +Q
Sbjct: 1923 SSSSESSSSSDESDDSNSSSSEERKPNREHFFEKQQ 1958
>AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 24.2 bits (50), Expect = 5.1
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 153 SKPXLYL*CYQCILHTLHRNNGTRHHELRKVKDRINVMFYFIK 281
S+P LY + T HR++ HH R+ + R Y I+
Sbjct: 10 SEPSLYTTVSEPSASTKHRHHSRHHHRRRRERYRSQRFGYEIQ 52
>AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 24.2 bits (50), Expect = 5.1
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 153 SKPXLYL*CYQCILHTLHRNNGTRHHELRKVKDRINVMFYFIK 281
S+P LY + T HR++ HH R+ + R Y I+
Sbjct: 10 SEPSLYTTVSEPSASTKHRHHSRHHHRRRRERYRSQRFGYEIQ 52
>AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 24.2 bits (50), Expect = 5.1
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 153 SKPXLYL*CYQCILHTLHRNNGTRHHELRKVKDRINVMFYFIK 281
S+P LY + T HR++ HH R+ + R Y I+
Sbjct: 10 SEPSLYTTVSEPSASTKHRHHSRHHHRRRRERYRSQRFGYEIQ 52
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 23.4 bits (48), Expect = 8.9
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 434 KREEGKLTHRQSRKEEMQLRKAMIH-SKTLCLLVSRVMRLATNQAKL 571
K+E GK+T ++KE+ ++R+ SK + + ++A Q KL
Sbjct: 277 KKEVGKMTREMAKKEQ-EIREVEAEMSKRHPMFIKAKEKVAHTQKKL 322
>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
symporter protein.
Length = 1127
Score = 23.4 bits (48), Expect = 8.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 370 SNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKR 477
S+ N ++ED+ D A SF+ REA + + R
Sbjct: 109 SDSNDDEEDNLIDENRYARSFRHFTREALPRMDNYR 144
>AJ420785-1|CAD12781.1| 379|Anopheles gambiae serpin protein.
Length = 379
Score = 23.4 bits (48), Expect = 8.9
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +1
Query: 202 YIEIMEQGTMNSEK*KIALM*CFILLKFHYNN*YPNMYPRCGSSGSI 342
+IE+ E+GT + + +M C +++ + +P +Y S G+I
Sbjct: 324 FIEVNEEGTEAAAATGMVMMTCAMIMYPMFTADHPFLYALKDSQGNI 370
>AJ271352-1|CAB69784.1| 379|Anopheles gambiae putative serine
protease inhibitor protein.
Length = 379
Score = 23.4 bits (48), Expect = 8.9
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +1
Query: 202 YIEIMEQGTMNSEK*KIALM*CFILLKFHYNN*YPNMYPRCGSSGSI 342
+IE+ E+GT + + +M C +++ + +P +Y S G+I
Sbjct: 324 FIEVNEEGTEAAAATGMVMMTCAMIMYPMFTADHPFLYALKDSQGNI 370
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.4 bits (48), Expect = 8.9
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 409 NKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQDLVPTCQQSDASGYKPS 564
N+A +E RR+ + A + AIK D + +P +Q + G+ P+
Sbjct: 309 NRARTEEQREERRQIKSDARAALQQAIKLSKDQHKQDLP--EQLEPHGFGPA 358
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 811,660
Number of Sequences: 2352
Number of extensions: 16511
Number of successful extensions: 32
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -