Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_G19
(466 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q54ZP7 Cluster: Putative uncharacterized protein; n=1; ... 37 0.19
UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 36 0.33
UniRef50_Q612I1 Cluster: Putative uncharacterized protein CBG167... 35 1.0
UniRef50_O44626 Cluster: Coexpressed with polycystins protein 4;... 34 1.3
UniRef50_Q9VJD7 Cluster: CG6639-PA; n=1; Drosophila melanogaster... 33 2.3
UniRef50_Q54BX1 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_Q7UHX1 Cluster: Serine/threonine-protein kinase; n=1; P... 33 4.1
UniRef50_A7EUK1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.1
UniRef50_P16795 Cluster: Structural glycoprotein UL73; n=89; Cyt... 33 4.1
UniRef50_UPI0000DD7BE7 Cluster: PREDICTED: hypothetical protein;... 32 5.4
UniRef50_Q6TXG0 Cluster: LRRGT00039; n=1; Rattus norvegicus|Rep:... 32 5.4
UniRef50_Q9VT17 Cluster: CG3280-PA; n=1; Drosophila melanogaster... 32 5.4
UniRef50_Q7YTR7 Cluster: Putative uncharacterized protein; n=1; ... 32 5.4
UniRef50_Q1VNF7 Cluster: Putative uncharacterized protein; n=1; ... 32 7.1
UniRef50_Q179U3 Cluster: ATP-binding cassette transporter; n=2; ... 32 7.1
UniRef50_A2QIX8 Cluster: Contig An04c0170, complete genome; n=1;... 32 7.1
UniRef50_UPI00015B42B0 Cluster: PREDICTED: similar to ENSANGP000... 31 9.4
UniRef50_UPI0000F2B42A Cluster: PREDICTED: similar to T-cell imm... 31 9.4
UniRef50_UPI0000DA3216 Cluster: PREDICTED: hypothetical protein;... 31 9.4
UniRef50_UPI0000DA2CBF Cluster: PREDICTED: similar to Small ubiq... 31 9.4
UniRef50_UPI000069F784 Cluster: Mucin; n=4; Xenopus tropicalis|R... 31 9.4
UniRef50_Q2JGP1 Cluster: Putative uncharacterized protein; n=3; ... 31 9.4
UniRef50_Q5CW96 Cluster: Signal peptide plus His and thr repeats... 31 9.4
UniRef50_A2DJF3 Cluster: 3'5'-cyclic nucleotide phosphodiesteras... 31 9.4
UniRef50_Q96YH6 Cluster: Putative uncharacterized protein ST2194... 31 9.4
UniRef50_A3DKV3 Cluster: Metallophosphoesterase precursor; n=1; ... 31 9.4
>UniRef50_Q54ZP7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 374
Score = 37.1 bits (82), Expect = 0.19
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 228
T T T TT T++I+ TTT T TN +TT H T T
Sbjct: 237 TTTTTTTTTTTTTTTTIIITHTTTTTTTTTNTTTTPHTTTT 277
>UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 911
Score = 36.3 bits (80), Expect = 0.33
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +1
Query: 109 LKETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT 222
L ETAT L+ T+L++P T L TAT+L+TT T
Sbjct: 545 LMETATALMVPTATALMVPTATDLTTTATDLTTTATAT 582
Score = 35.5 bits (78), Expect = 0.57
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 109 LKETATNLLTTARTSLILPKTTTLM-ETATNLSTTVHITWTVPLSLV 246
L ETAT L+ T+L++P T LM TAT+L+TTV T +L+
Sbjct: 676 LMETATALMVPTATALMVPTATDLMVPTATDLTTTVTDLTTTATALM 722
Score = 35.1 bits (77), Expect = 0.76
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +1
Query: 109 LKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLAV 255
L TAT L+ TA T+L +P T LMETAT L+ VP + L V
Sbjct: 714 LTTTATALMETA-TALTVPTATALMETATALTVPTATALMVPTATDLTV 761
Score = 34.7 bits (76), Expect = 1.0
Identities = 21/42 (50%), Positives = 23/42 (54%)
Frame = +1
Query: 109 LKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 234
L TAT+L TTA T L +P T LMETAT L VP
Sbjct: 523 LTTTATDLTTTA-TDLTVPTVTALMETATALMVPTATALMVP 563
Score = 34.7 bits (76), Expect = 1.0
Identities = 23/57 (40%), Positives = 28/57 (49%)
Frame = +1
Query: 118 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLAVGSKEYLRKLIT 288
T T+L TTA T L +P T LMETAT L VP + L V + L +T
Sbjct: 657 TVTDLTTTA-TDLTVPTVTALMETATALMVPTATALMVPTATDLMVPTATDLTTTVT 712
Score = 32.3 bits (70), Expect = 5.4
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 118 TATNLLTTARTSLILPKTTTLM-ETATNLSTTVHITWTVPLSLVLAV 255
TAT L+ TA T+L +P T LM TAT+L+ TVP + L V
Sbjct: 732 TATALMETA-TALTVPTATALMVPTATDLTVPTATALTVPTATALTV 777
>UniRef50_Q612I1 Cluster: Putative uncharacterized protein CBG16715;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG16715 - Caenorhabditis
briggsae
Length = 2523
Score = 34.7 bits (76), Expect = 1.0
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +1
Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLAVGS 261
T K T++ TT + + P TT L++T T +TT H T P+ + + +GS
Sbjct: 1232 TTKTATTSMATTVAPTTVTPTTTPLLQTTTT-TTTTHAPLT-PIRISMKLGS 1281
>UniRef50_O44626 Cluster: Coexpressed with polycystins protein 4;
n=2; Caenorhabditis|Rep: Coexpressed with polycystins
protein 4 - Caenorhabditis elegans
Length = 402
Score = 34.3 bits (75), Expect = 1.3
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 88 LCWLWPTLKETATNLLTTARTSLILPKTTT---LMETATNLSTTVHITWTVPLS 240
LC+LW L T T TT T+ + TTT + T T T T TVPL+
Sbjct: 179 LCYLWVPLTTTTTTTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLN 232
>UniRef50_Q9VJD7 Cluster: CG6639-PA; n=1; Drosophila
melanogaster|Rep: CG6639-PA - Drosophila melanogaster
(Fruit fly)
Length = 494
Score = 33.5 bits (73), Expect = 2.3
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +3
Query: 117 NGYEPIDNRPYIVNP---PKDYN--PNGNGYEPIDNGAYYVDRPPFPGARGG 257
NG P++N Y VN P + P+ NG P++NG Y V+ +P GG
Sbjct: 131 NGGYPVNNGGYPVNNGGYPSNNGGYPSNNGGYPVNNGGYPVNNGGYPANNGG 182
>UniRef50_Q54BX1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 690
Score = 33.1 bits (72), Expect = 3.1
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +1
Query: 127 NLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 234
NLLT+ + SL P TTT T T +TT + T T P
Sbjct: 253 NLLTSLKNSLNSPITTTTTTTTTTTTTTTNSTTTSP 288
>UniRef50_Q7UHX1 Cluster: Serine/threonine-protein kinase; n=1;
Pirellula sp.|Rep: Serine/threonine-protein kinase -
Rhodopirellula baltica
Length = 305
Score = 32.7 bits (71), Expect = 4.1
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 93 LAMANAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPPF--PGARGG 257
LA + QG + + R +I PPKD +G ID G PPF PG R G
Sbjct: 144 LAYVHEQGFIHRDVCPRNFICTPPKDGEETVSGVRLIDFGLTVPATPPFMAPGNRTG 200
>UniRef50_A7EUK1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 2000
Score = 32.7 bits (71), Expect = 4.1
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +3
Query: 99 MAN--AQGNGYEPIDNRPYIVNPPKDYN-PNGNGYEPIDNGAY 218
MAN + G+GYEP + Y P YN P GN YEP + Y
Sbjct: 1676 MANHESSGSGYEPPSSTGY--ETPTGYNTPTGNSYEPPSSTGY 1716
>UniRef50_P16795 Cluster: Structural glycoprotein UL73; n=89;
Cytomegalovirus|Rep: Structural glycoprotein UL73 -
Human cytomegalovirus (strain AD169) (HHV-5) (Human
herpesvirus 5)
Length = 138
Score = 32.7 bits (71), Expect = 4.1
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 118 TATNLLTTARTSLILPKTTTLMETATNLSTTVH 216
+ T L T A TS TTTL T+T LS+T H
Sbjct: 40 STTKLTTVATTSATTTTTTTLSTTSTKLSSTTH 72
>UniRef50_UPI0000DD7BE7 Cluster: PREDICTED: hypothetical protein;
n=2; Deuterostomia|Rep: PREDICTED: hypothetical protein
- Homo sapiens
Length = 280
Score = 32.3 bits (70), Expect = 5.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 234
T T T TTA T++ +TT + T T STT+ T+P
Sbjct: 195 TTTTTITTTATTASTTITTTTSTTTITTNTTASTTITTNTTIP 237
>UniRef50_Q6TXG0 Cluster: LRRGT00039; n=1; Rattus norvegicus|Rep:
LRRGT00039 - Rattus norvegicus (Rat)
Length = 322
Score = 32.3 bits (70), Expect = 5.4
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLAVGSKE 267
T T T +TTA ++ TT++ TAT ++TT T + A+ +K+
Sbjct: 268 TTTVTVTTAITTATSTTATTTTTSITTTATAITTTATTATTTTATATTAIATKQ 321
>UniRef50_Q9VT17 Cluster: CG3280-PA; n=1; Drosophila
melanogaster|Rep: CG3280-PA - Drosophila melanogaster
(Fruit fly)
Length = 1937
Score = 32.3 bits (70), Expect = 5.4
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 97 LWPTLKETATNLLTTARTSLILPKTTTLMETAT--NLSTTVHITWTVPLSLVLA 252
+W T +ET+ TT+ + + P TTT T T +TT T T L + A
Sbjct: 697 IWSTTEETSPTTTTTSPWTTLPPSTTTTEATTTTERATTTTEATSTTTLKITTA 750
>UniRef50_Q7YTR7 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 460
Score = 32.3 bits (70), Expect = 5.4
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = +1
Query: 103 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 234
PT + T T TT T+ P TTT ET T +TT T T P
Sbjct: 112 PTTETTTTPTTTTPTTTTTTPTTTTT-ETTTTPTTTTTETTTTP 154
>UniRef50_Q1VNF7 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 477
Score = 31.9 bits (69), Expect = 7.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 183 GNGYEPIDNGAYYVDRPPFPG 245
GN Y P+DNG + RPP PG
Sbjct: 29 GNSYIPLDNGTIWKVRPPTPG 49
>UniRef50_Q179U3 Cluster: ATP-binding cassette transporter; n=2; Aedes
aegypti|Rep: ATP-binding cassette transporter - Aedes
aegypti (Yellowfever mosquito)
Length = 1382
Score = 31.9 bits (69), Expect = 7.1
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +1
Query: 109 LKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLAV 255
+K + T LL+T+ + ++ T T+ + ++ +H TW++ LS L V
Sbjct: 951 MKSSLTQLLSTSISDMVNLFTDTISTRFSLINNCIHYTWSIVLSTTLLV 999
>UniRef50_A2QIX8 Cluster: Contig An04c0170, complete genome; n=1;
Aspergillus niger|Rep: Contig An04c0170, complete genome
- Aspergillus niger
Length = 912
Score = 31.9 bits (69), Expect = 7.1
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 91 CWLWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT 222
CW PT + L+ R +P TT+ ET N T +H T
Sbjct: 52 CWTTPTFTKAIILLIDALRYDFTIPITTSSNETYHNALTILHTT 95
>UniRef50_UPI00015B42B0 Cluster: PREDICTED: similar to
ENSANGP00000019995; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000019995 - Nasonia
vitripennis
Length = 664
Score = 31.5 bits (68), Expect = 9.4
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLAVGSK 264
++ NLLTTA TSL ++T + T T +TT T +++++ K
Sbjct: 543 SISNVTMNLLTTAATSLTATTSSTPIPTTTPTTTTTTTTLASTIAMIVKATKK 595
>UniRef50_UPI0000F2B42A Cluster: PREDICTED: similar to T-cell
immunoglobulin and mucin domain containing 4; n=1;
Monodelphis domestica|Rep: PREDICTED: similar to T-cell
immunoglobulin and mucin domain containing 4 -
Monodelphis domestica
Length = 373
Score = 31.5 bits (68), Expect = 9.4
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 106 TLKETATNLLTTAR--TSLILPKTTTLMETATNLSTTVHITWT 228
T + T T L TT T+ L TTTL T T +TT+H+T T
Sbjct: 145 TTRPTTTTLPTTTTLPTTTTLLTTTTLPTTTTLPTTTIHLTTT 187
>UniRef50_UPI0000DA3216 Cluster: PREDICTED: hypothetical protein;
n=2; Coelomata|Rep: PREDICTED: hypothetical protein -
Rattus norvegicus
Length = 418
Score = 31.5 bits (68), Expect = 9.4
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +1
Query: 118 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLAVGSKEYLRKLIT 288
T T TT S + TTT T T +TT+ IT T S ++ + +IT
Sbjct: 287 TTTTTTTTITNSSTITTTTTSSSTTTTTTTTIIITTTTTTSTIIITTTSTTTTIIIT 343
>UniRef50_UPI0000DA2CBF Cluster: PREDICTED: similar to Small
ubiquitin-related modifier 3 precursor (SUMO-3)
(Ubiquitin-like protein SMT3A) (SMT3 homolog 1); n=1;
Rattus norvegicus|Rep: PREDICTED: similar to Small
ubiquitin-related modifier 3 precursor (SUMO-3)
(Ubiquitin-like protein SMT3A) (SMT3 homolog 1) - Rattus
norvegicus
Length = 257
Score = 31.5 bits (68), Expect = 9.4
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLV 246
T+ T T +TT T++ + TTT + T T ++TT+ T T + +
Sbjct: 151 TITSTTTTTITT--TTITITTTTTTITTTTTITTTITFTTTTSTTTI 195
>UniRef50_UPI000069F784 Cluster: Mucin; n=4; Xenopus tropicalis|Rep:
Mucin - Xenopus tropicalis
Length = 1173
Score = 31.5 bits (68), Expect = 9.4
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 103 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTV-HITWTVP 234
PT T T + TT T+ P TTT ET T+ +TT T T+P
Sbjct: 164 PTPTTTETTIPTTTETTT--PTTTTTTETTTSTTTTTTETTTTIP 206
>UniRef50_Q2JGP1 Cluster: Putative uncharacterized protein; n=3;
Frankia|Rep: Putative uncharacterized protein - Frankia
sp. (strain CcI3)
Length = 313
Score = 31.5 bits (68), Expect = 9.4
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 88 LCW--LWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLA 252
+CW LWP L +T L ART+L T TL + ++ +P L +A
Sbjct: 185 ICWPRLWPLLPDTHRTDLAAARTALDTAATITLWALLFAATGGLYTLLAIPAGLAVA 241
>UniRef50_Q5CW96 Cluster: Signal peptide plus His and thr repeats,
signal peptide plus transmembrane domain or GPI anchor,
predicted mucin; n=2; Cryptosporidium|Rep: Signal
peptide plus His and thr repeats, signal peptide plus
transmembrane domain or GPI anchor, predicted mucin -
Cryptosporidium parvum Iowa II
Length = 520
Score = 31.5 bits (68), Expect = 9.4
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLAVGSK-EYLRKL 282
T T T TT T+ TTT T T +TT T T + A GS+ LR+L
Sbjct: 188 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTEAPGSRINSLRRL 247
>UniRef50_A2DJF3 Cluster: 3'5'-cyclic nucleotide phosphodiesterase
family protein; n=1; Trichomonas vaginalis G3|Rep:
3'5'-cyclic nucleotide phosphodiesterase family protein
- Trichomonas vaginalis G3
Length = 1006
Score = 31.5 bits (68), Expect = 9.4
Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 97 LWPTLKETATNLLTTARTSL-ILPKTTTLMET 189
L PT+ +TA NLL T R SL IL KTT + T
Sbjct: 340 LLPTIMDTACNLLNTERCSLFILDKTTNELVT 371
>UniRef50_Q96YH6 Cluster: Putative uncharacterized protein ST2194;
n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
protein ST2194 - Sulfolobus tokodaii
Length = 630
Score = 31.5 bits (68), Expect = 9.4
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 103 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 234
P++ T + TT+ TS+ T T + + T+ STT T TVP
Sbjct: 549 PSIVITTSTTSTTSTTSITTSTTQTTITSTTSTSTTSSTTTTVP 592
>UniRef50_A3DKV3 Cluster: Metallophosphoesterase precursor; n=1;
Staphylothermus marinus F1|Rep: Metallophosphoesterase
precursor - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 723
Score = 31.5 bits (68), Expect = 9.4
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 103 PTLKETATNLLTTARTSLIL--PKTTTLMETATNLSTTVHITWTVP 234
PT+ T T TT + I P TTT T T TT T T P
Sbjct: 631 PTITTTTTTTTTTTTSPTITTPPSTTTTTTTTTTFPTTTTTTTTTP 676
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,582,501
Number of Sequences: 1657284
Number of extensions: 7629286
Number of successful extensions: 21765
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 19921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21615
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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