Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_G19
(466 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22) 33 0.15
SB_6711| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06) 29 1.4
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033) 29 1.9
SB_50455| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_31773| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_40768| Best HMM Match : TM_helix (HMM E-Value=7.7) 28 3.3
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 3.3
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 28 3.3
SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011) 28 4.4
SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024) 28 4.4
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_8116| Best HMM Match : FIVAR (HMM E-Value=8.6) 27 5.8
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 27 5.8
SB_56515| Best HMM Match : Ribosomal_L30 (HMM E-Value=5.6) 27 7.7
SB_23233| Best HMM Match : Mucin (HMM E-Value=2.1) 27 7.7
SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_57605| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_33645| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37) 27 7.7
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 27 7.7
>SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22)
Length = 266
Score = 32.7 bits (71), Expect = 0.15
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +1
Query: 124 TNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLAV 255
TN++TT+ T++I T T+ T T ++ T+ IT T+ +++ + +
Sbjct: 168 TNIITTSNTNIITTTTITITITIT-ITITITITITITITITITI 210
>SB_6711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 123 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPPF 239
YEP+D+ + P D + N YEP+D Y+ PP+
Sbjct: 59 YEPLDDDNLSIYGPLD-DDNLYIYEPLDEDNLYIYEPPY 96
>SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06)
Length = 587
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 118 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 228
T T TT T+ I TTT T TN +TTV+ T T
Sbjct: 545 TITTNYTTTVTTTITNYTTTFTITITNYTTTVNTTIT 581
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 103 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHI 219
PT T T + T+ I TTT+ T TN +TT+ I
Sbjct: 379 PTDFTTITTITNYTTTTTITNYTTTVSTTITNYTTTITI 417
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 103 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 234
PT ++T TNL +T R +TTT + + +TT T T+P
Sbjct: 188 PTTQQTTTNLPST-RQPTTNQQTTTTLPSTKQPTTTQQTTTTIP 230
>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +1
Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLA 252
T T T TT T+ TTT TAT + T+ IT TV ++ +A
Sbjct: 44 TTTTTTTTTTTTTTTTTTTTTTTTTTTTATATTKTITIT-TVTITTAVA 91
>SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033)
Length = 382
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +1
Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLA 252
T T T TT T+ TTT TAT + T+ IT TV ++ +A
Sbjct: 166 TTTTTTTTTTTTTTTTTTTTTTTTTTTTATATTKTITIT-TVTITTAVA 213
>SB_50455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLV 246
T+ AT + T T++I TTT+ T T ++TT+ T T +++
Sbjct: 12 TIITNATTTIITLSTTIITT-TTTITTTTTTITTTITPTITTTTTII 57
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 118 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLA 252
T T +TT T++ T T+ T T ++TT+ T + ++A
Sbjct: 30 TTTTTITTTTTTITTTITPTITTTTTIITTTITTTIITTTTAIIA 74
>SB_31773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 874
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -3
Query: 272 RYSLLPTASTRERGTVHVICTVVDRFVAVSIRVVVFGRINDVRAVVNRFVA 120
RY + + R V + V+ R+VA S+RVV+ + VR V+ R+VA
Sbjct: 811 RYVAIASVRVVMRRYVASVRVVMRRYVA-SVRVVMRRYVTSVRVVMRRYVA 860
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = -3
Query: 236 RGTVHVICTVVDRFVAVSIRVVVFGRINDVRAVVNRFVAVS 114
R V + V+ R+VA S+RVV+ + VR V+ R+VA++
Sbjct: 777 RRYVTSVRVVMRRYVA-SVRVVMPRYVASVRVVMRRYVAIA 816
>SB_40768| Best HMM Match : TM_helix (HMM E-Value=7.7)
Length = 122
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVL 249
T+ T T ++TT T++ + TT + T + TTV I T+ + ++
Sbjct: 21 TMITTITVIITTMITTITITTTTIITTMITTIITTVIIIITITIITII 68
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +1
Query: 124 TNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLAV 255
T ++TT T++I+ T T++ T + TT+ T T+ +++ +
Sbjct: 46 TTMITTIITTVIIIITITIITIITTIITTIITTITIITTIITTI 89
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 103 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTV 231
P L+ T+ T A S + P+TT ET TTV TV
Sbjct: 326 PALETTSAPESTAATESTVAPETTVSQETTVAPETTVPTETTV 368
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 136 TTARTSLILPKTTTLMETATNLSTTV 213
T A + + PKTTT +ET TTV
Sbjct: 229 TDAPATTLAPKTTTALETTVEAKTTV 254
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 103 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTV 213
P L+ T+ T A S + P+TT ET TTV
Sbjct: 260 PALETTSAPESTAATESTVAPETTVSQETTVAPETTV 296
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 103 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTV 231
P L+ T+ T A S + P+TT ET TTV TV
Sbjct: 2022 PALETTSAPESTAATESTVAPETTVSQETTVAPETTVPTETTV 2064
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 103 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTV 213
P L+ T+ T A S + P+TT ETA TTV
Sbjct: 807 PALETTSAPESTAATESTVAPETTVPTETAAAPDTTV 843
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 136 TTARTSLILPKTTTLMETATNLSTTV 213
T A + + PKTTT +ET TTV
Sbjct: 2291 TDAPATTLAPKTTTALETTVEAKTTV 2316
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 103 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTV 213
P L+ T+ T A S + P+TT ET TTV
Sbjct: 359 PALETTSAPESTAATESTVAPETTVSQETTVAPETTV 395
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 103 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTV 213
P L+ T+ T A S + P+TT ET TTV
Sbjct: 1428 PALETTSAPESTAATESTVAPETTVSQETTVAPETTV 1464
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 103 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTV 213
P L+ T+ T A S + P+TT ET TTV
Sbjct: 2322 PALETTSAPESTAATESTVAPETTVSQETTVAPETTV 2358
>SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011)
Length = 972
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +1
Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLAV--GSKEYL 273
T T T TT T+ TTT T + T I W ++ V A+ G ++YL
Sbjct: 526 TATATTTATATTTATTAATATTTTTTTTTNTTTNTTIIIWIAAVTDVKALSHGIEDYL 583
>SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024)
Length = 249
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 130 LLTTARTSLILPKTTTLMETATNLSTTVHITWTV 231
+++T T+ TTT+ T T +TT+ IT T+
Sbjct: 133 IISTTTTTTSTANTTTITATITTTTTTITITATI 166
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSL 243
T T + TT T+ I TTT+ TAT + T IT T+ ++
Sbjct: 136 TTTTTTSTANTTTITATITTTTTTITITATITTITTTITATITTTI 181
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 27.9 bits (59), Expect = 4.4
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Frame = +3
Query: 114 GNGYEPIDNRP----YIVNPPKDYNPNGNGYEPID-NGAYYVDRPP 236
G +E + RP Y PP DY N N Y P NG Y RPP
Sbjct: 245 GRDHEMYNGRPGPGGYYRRPPHDYQFNRN-YPPNQYNGNYQGGRPP 289
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 103 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLA 252
P L+ TA + + S + P+TT + ET TTV TV +A
Sbjct: 1233 PALETTAPESTSASTESTVAPETTAVPETTAAHETTVAPETTVAPETTIA 1282
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 112 KETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLA 252
K T T AR ++ +P+TT ET TTV TV + +A
Sbjct: 3778 KTTTQPETTAARETIAVPETTVASETTAASDTTVAPETTVVPEITVA 3824
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 121 ATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 228
AT +TT ++ P TT TAT +TT T T
Sbjct: 96 ATATITTYTATVTAPNATTTTPTATTTTTTTTTTTT 131
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +1
Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 234
T TA N TT T+ TTT T +TT + T T P
Sbjct: 104 TATVTAPNATTTTPTATTTTTTTTTTTTPYATTTTPNTTTTTP 146
>SB_8116| Best HMM Match : FIVAR (HMM E-Value=8.6)
Length = 127
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 118 TATNLLTTARTSLILPK--TTTLMETATNLSTTVHIT 222
T T+ +TT T+ K TTT +T T +TT IT
Sbjct: 56 TTTSTITTTTTTTTTTKTTTTTTTKTTTTTATTTEIT 92
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Frame = +3
Query: 111 QGNGYEPIDNRP---YIVNPPKDYNPNGNGYEPIDNGAYYVDRPPFPGARGG 257
+G G P N P Y PP+ Y P GY Y PP G GG
Sbjct: 213 EGGGIPP-QNHPLTNYPAPPPQGYAPPPGGYPGAPPAGGYPGAPPPGGYPGG 263
>SB_56515| Best HMM Match : Ribosomal_L30 (HMM E-Value=5.6)
Length = 183
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 85 RLCWLWPTLKETATNLLTTARTSLILPKTTTLMETAT 195
+ CW++PT+ ++A + + RT L L + L AT
Sbjct: 127 KFCWIFPTVGKSAEEITSILRT-LFLRRIPLLFSKAT 162
>SB_23233| Best HMM Match : Mucin (HMM E-Value=2.1)
Length = 350
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +1
Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLAVGSKEYLRKLI 285
TL T TT +S+ P T+ TAT +TTV + P + ++ S + I
Sbjct: 154 TLSTLTTTTTTTTSSSIATPSTSGTYTTATT-TTTVSSSIATPSTTIVTSPSPSFDELFI 212
Query: 286 TK 291
++
Sbjct: 213 SR 214
>SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +1
Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 228
T TAT TA T+ TTT T T +TT T T
Sbjct: 22 TAATTATITTATATTTTTTTTTTTTTTTTTTTTTTTTTTTT 62
>SB_57605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 154 LILPKTTTLMETATNLSTTVHITWTVPLSLV 246
+I+ TTT TAT TT H T+PLSLV
Sbjct: 295 IIIIVTTTTASTATT-DTTQHSPNTLPLSLV 324
>SB_33645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 154 LILPKTTTLMETATNLSTTVHITWTVPLSLVLAV 255
+I+ TTT T T +TT+ T T +++++ +
Sbjct: 19 IIITTTTTTTTTTTTTTTTITTTTTTTINIIIII 52
>SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37)
Length = 352
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 118 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTV 231
T TN++TTA T+ +T+ T T +T + I T+
Sbjct: 297 TNTNIITTATTTTTSTTISTITVTITTTTTIIIIVITI 334
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 103 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTV 213
P L+ T+ T A S + P+TT ET TTV
Sbjct: 1720 PALETTSAPESTAATESTVAPETTVSQETTVAPETTV 1756
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 103 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTV 213
P L+ T+ T A S + P+TT ET TTV
Sbjct: 2680 PALETTSAPESTAATESTVAPETTVSQETTVAPETTV 2716
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,433,137
Number of Sequences: 59808
Number of extensions: 234319
Number of successful extensions: 1025
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 957531822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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