Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_G19
         (466 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellu...    33   0.64 
AF007192-1|AAC02270.1|  338|Homo sapiens intestinal mucin protein.     31   2.0  
CR457114-1|CAG33395.1|  364|Homo sapiens HAVCR1 protein.               30   4.5  
BC013325-1|AAH13325.1|  364|Homo sapiens HAVCR1 protein protein.       30   4.5  
AF007191-1|AAC02269.1|  589|Homo sapiens intestinal mucin protein.     29   6.0  

>AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellular
           receptor 1 protein.
          Length = 359

 Score = 32.7 bits (71), Expect = 0.64
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 118 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLA 252
           T    +TT RTS  +P TTT+  T    + ++  T TVP ++ ++
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVS 180



 Score = 29.1 bits (62), Expect = 7.9
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +1

Query: 106 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLAV 255
           T+  T T   TT  T++ +P TTT+  T T +STT  +  T  +    +V
Sbjct: 149 TVPTTTTVPTTTVPTTMSIPTTTTVPTTMT-VSTTTSVPTTTSIPTTTSV 197


>AF007192-1|AAC02270.1|  338|Homo sapiens intestinal mucin protein.
          Length = 338

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 14/56 (25%), Positives = 26/56 (46%)
 Frame = +1

Query: 100 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLAVGSKE 267
           WPT   T ++L T   +S  +P T       TN++    +  T+P ++  +  + E
Sbjct: 179 WPTATNTLSSLTTNILSSTPVPSTERTTSHTTNINPVSTLVTTLPTTITRSTPTSE 234


>CR457114-1|CAG33395.1|  364|Homo sapiens HAVCR1 protein.
          Length = 364

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +1

Query: 118 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 234
           T    +TT RTS  +P TTT+  T T  +TTV  T ++P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPMT-TVPTTTVPTTMSIP 173


>BC013325-1|AAH13325.1|  364|Homo sapiens HAVCR1 protein protein.
          Length = 364

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +1

Query: 118 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 234
           T    +TT RTS  +P TTT+  T T  +TTV  T ++P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPMT-TVPTTTVPTTMSIP 173


>AF007191-1|AAC02269.1|  589|Homo sapiens intestinal mucin protein.
          Length = 589

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 13/55 (23%), Positives = 29/55 (52%)
 Frame = +1

Query: 103 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPLSLVLAVGSKE 267
           PT   T ++L ++  +S ++P T  +    TNL+ +  +  T+P ++  +  + E
Sbjct: 400 PTANSTLSSLTSSILSSTLVPSTDMITSHTTNLTRSSPLLATLPTTITRSTPTSE 454


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,030,890
Number of Sequences: 237096
Number of extensions: 1176322
Number of successful extensions: 9331
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9329
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)