Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_G18
(611 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 179 2e-45
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 177 6e-45
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 176 8e-45
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 107 4e-24
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 107 4e-24
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 107 4e-24
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 107 4e-24
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 107 4e-24
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 107 4e-24
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 107 4e-24
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 107 4e-24
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 107 4e-24
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 107 4e-24
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 107 4e-24
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 107 4e-24
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 107 4e-24
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 107 4e-24
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 107 4e-24
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 107 4e-24
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 107 4e-24
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 106 1e-23
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 106 1e-23
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 101 3e-22
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 91 7e-19
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 68 4e-12
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 52 3e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 50 1e-06
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 50 1e-06
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 48 5e-06
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 46 1e-05
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 40 0.002
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 39 0.002
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 39 0.002
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 39 0.003
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 38 0.005
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 38 0.007
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 38 0.007
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 38 0.007
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 38 0.007
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 37 0.009
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 37 0.012
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 37 0.012
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 34 0.065
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 33 0.11
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 33 0.11
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 33 0.20
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 31 0.46
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 31 0.46
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 31 0.60
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 30 1.1
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 30 1.4
At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal... 30 1.4
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 1.4
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 30 1.4
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 29 1.8
At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal... 29 2.4
At1g47680.1 68414.m05297 hypothetical protein 29 2.4
At5g12280.1 68418.m01444 hypothetical protein 29 3.2
At2g25840.2 68415.m03101 tRNA synthetase class I (W and Y) famil... 28 4.2
At2g25840.1 68415.m03100 tRNA synthetase class I (W and Y) famil... 28 4.2
At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal... 28 5.6
At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-... 27 7.4
At1g78020.1 68414.m09092 senescence-associated protein-related s... 27 9.8
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 179 bits (435), Expect = 2e-45
Identities = 87/141 (61%), Positives = 98/141 (69%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXX 278
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74
Query: 279 XXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAV 458
Y+ P LAVL+FYKVD +GK+ RL++EC CG G FMA
Sbjct: 75 GGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKECPSVSCGPGTFMAS 134
Query: 459 MEDRHYCGKCHSTMVFKDDDK 521
DRHYCGKC +T VFK D+
Sbjct: 135 HFDRHYCGKCGTTYVFKKADE 155
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 177 bits (430), Expect = 6e-45
Identities = 86/139 (61%), Positives = 97/139 (69%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXX 278
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74
Query: 279 XXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAV 458
Y+ P LAVL+FYKVD +GK+ RLR+EC CGAG FMA
Sbjct: 75 GGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKECPNATCGAGTFMAS 134
Query: 459 MEDRHYCGKCHSTMVFKDD 515
DRHYCGKC T V++ +
Sbjct: 135 HFDRHYCGKCGLTYVYQKE 153
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 176 bits (429), Expect = 8e-45
Identities = 85/139 (61%), Positives = 97/139 (69%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXX 278
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74
Query: 279 XXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAV 458
Y+ P LAVL+FYK+D +GK+ RLR+EC CGAG FMA
Sbjct: 75 GGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKECPNATCGAGTFMAS 134
Query: 459 MEDRHYCGKCHSTMVFKDD 515
DRHYCGKC T V++ +
Sbjct: 135 HFDRHYCGKCGLTYVYQKE 153
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 91 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 243 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 319 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 374
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 229 MQIFVKTLTGKTITL 243
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 305 MQIFVKTLTGKTITL 319
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 91 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 243 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 229 MQIFVKTLTGKTITL 243
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 91 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 243 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 229 MQIFVKTLTGKTITL 243
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 91 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Score = 36.7 bits (81), Expect = 0.012
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKE 158
L VE SDTI+NVKAKIQDKE
Sbjct: 243 LEVESSDTIDNVKAKIQDKE 262
Score = 31.5 bits (68), Expect = 0.46
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 136 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 282
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 303
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 229 MQIFVKTLTGKTITL 243
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 91 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 243 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 319 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 374
Score = 36.7 bits (81), Expect = 0.012
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKE 158
L VE SDTI+NVKAKIQDKE
Sbjct: 395 LEVESSDTIDNVKAKIQDKE 414
Score = 31.5 bits (68), Expect = 0.46
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 136 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 282
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 229 MQIFVKTLTGKTITL 243
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 305 MQIFVKTLTGKTITL 319
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 381 MQIFVKTLTGKTITL 395
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 91 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 243 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Score = 36.7 bits (81), Expect = 0.012
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKE 158
L VE SDTI+NVKAKIQDKE
Sbjct: 319 LEVESSDTIDNVKAKIQDKE 338
Score = 31.5 bits (68), Expect = 0.46
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 136 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 282
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 229 MQIFVKTLTGKTITL 243
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 305 MQIFVKTLTGKTITL 319
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 91 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 243 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 319 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 374
Score = 36.7 bits (81), Expect = 0.012
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKE 158
L VE SDTI+NVKAKIQDKE
Sbjct: 395 LEVESSDTIDNVKAKIQDKE 414
Score = 31.5 bits (68), Expect = 0.46
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 136 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 282
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 229 MQIFVKTLTGKTITL 243
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 305 MQIFVKTLTGKTITL 319
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 381 MQIFVKTLTGKTITL 395
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 91 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 243 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Score = 36.7 bits (81), Expect = 0.012
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKE 158
L VE SDTI+NVKAKIQDKE
Sbjct: 319 LEVESSDTIDNVKAKIQDKE 338
Score = 31.5 bits (68), Expect = 0.46
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 136 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 282
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 229 MQIFVKTLTGKTITL 243
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 305 MQIFVKTLTGKTITL 319
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 91 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 91 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 243 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 229 MQIFVKTLTGKTITL 243
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 91 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 91 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 243 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 229 MQIFVKTLTGKTITL 243
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 75.8 bits (178), Expect = 2e-14
Identities = 32/56 (57%), Positives = 44/56 (78%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
+ +EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLV
Sbjct: 91 IDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLV 146
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 104 bits (250), Expect = 4e-23
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKE IPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 166 LEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 221
Score = 100 bits (240), Expect = 7e-22
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+D NIQKESTLHLV
Sbjct: 91 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLV 145
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 215
L VE S TI+NVKAKIQDKEGIPP+QQRLIFAGKQLE G
Sbjct: 242 LEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 152 MQIFVKTLTGKTITL 166
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 228 MQIFVKTLTGKTITL 242
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 107 bits (258), Expect = 4e-24
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 15 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 79.0 bits (186), Expect = 2e-15
Identities = 33/56 (58%), Positives = 45/56 (80%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
+ +EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLV
Sbjct: 91 IDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLV 146
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 106 bits (255), Expect = 1e-23
Identities = 50/56 (89%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+N+KAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 91 LEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 101 bits (243), Expect = 3e-22
Identities = 49/56 (87%), Positives = 52/56 (92%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEGI P+QQRLIFAGKQ EDGRTL+DYNIQKESTLHLV
Sbjct: 167 LEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLV 222
Score = 98.3 bits (234), Expect = 4e-21
Identities = 45/56 (80%), Positives = 52/56 (92%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQD EGIPP+Q RLIFAGKQLEDGRTL+DYN+Q++STLHL+
Sbjct: 15 LEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLL 70
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 106 bits (254), Expect = 1e-23
Identities = 49/56 (87%), Positives = 54/56 (96%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKEG+PP+QQRLIFAGKQL+DGRTL+DYNIQKESTLHLV
Sbjct: 93 LEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLV 148
Score = 105 bits (253), Expect = 2e-23
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDT +NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 169 LEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 224
Score = 92.7 bits (220), Expect = 2e-19
Identities = 47/57 (82%), Positives = 51/57 (89%), Gaps = 1/57 (1%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAKIQDKE I P+QQRLIFAG+QLEDG TL+DYNIQKESTLHLV
Sbjct: 245 LEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTLHLV 301
Score = 83.8 bits (198), Expect = 8e-17
Identities = 40/55 (72%), Positives = 47/55 (85%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 263
+ V SDTI NVKAKIQD EGIP +QQRLIF+GK L+DGRTL+DY+IQK+S LHL
Sbjct: 17 IDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDSILHL 71
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFVK LTGKTITL
Sbjct: 79 MQIFVKTLTGKTITL 93
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFV LTGKTITL
Sbjct: 231 MQIFVNTLTGKTITL 245
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 101 bits (243), Expect = 3e-22
Identities = 49/56 (87%), Positives = 52/56 (92%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L V+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 93 LEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 148
Score = 96.7 bits (230), Expect = 1e-20
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SD+I NVKAKIQ+KEGIP +QQRLIFAGKQLEDG TL+DYNIQKESTLHLV
Sbjct: 17 LDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLHLV 72
Score = 84.2 bits (199), Expect = 6e-17
Identities = 43/58 (74%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPP--NQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE DTIENVKA +QDKEGI P N QRLIF GK+L+DG TL+DY+IQKESTLHLV
Sbjct: 333 LEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQKESTLHLV 390
Score = 82.2 bits (194), Expect = 2e-16
Identities = 41/56 (73%), Positives = 46/56 (82%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI+NVKAK+QDKE IP + RLIFAGK LE GRTL+ YNIQK STL+LV
Sbjct: 257 LEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLV 312
Score = 81.4 bits (192), Expect = 4e-16
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 263
L V SDTI++VKAKIQDK G PP+QQ L+F G QL+DGRTL DYNI+ ESTLHL
Sbjct: 407 LEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHL 461
Score = 79.8 bits (188), Expect = 1e-15
Identities = 40/56 (71%), Positives = 45/56 (80%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE SDTI NVK KIQ KEGI P+QQ LIF G+QLEDG TL DY+I K+STL+LV
Sbjct: 566 LEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYLV 621
Score = 74.5 bits (175), Expect = 5e-14
Identities = 38/57 (66%), Positives = 45/57 (78%), Gaps = 2/57 (3%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL--EDGRTLSDYNIQKESTLHL 263
L VE SDTIENVKAKIQD+EG+ P+ QRLIF G++L ED RTL+DY I+ STL L
Sbjct: 174 LKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCL 230
Score = 73.3 bits (172), Expect = 1e-13
Identities = 36/54 (66%), Positives = 41/54 (75%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLH 260
L VE SDTI+NVK KIQ K GIP ++QRLIF G+ L RTL DYNIQK ST+H
Sbjct: 490 LEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIH 543
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 56 MQIFVKXLTGKTITL 100
MQIFV+ LTGKTITL
Sbjct: 79 MQIFVQTLTGKTITL 93
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 41 VRRVKMQIFVKXLTGKTITL 100
++R MQIF+K LTGKTI L
Sbjct: 547 LQRGGMQIFIKTLTGKTIIL 566
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 90.6 bits (215), Expect = 7e-19
Identities = 42/56 (75%), Positives = 48/56 (85%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE DTIEN+KAKIQDK+GIP +QQRLIF GKQLEDG TL+DYNIQ +S LHL+
Sbjct: 100 LEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQNDSILHLI 155
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 68.1 bits (159), Expect = 4e-12
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
+ +E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN+++ S LHLV
Sbjct: 15 IEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLV 70
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +3
Query: 105 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+++ TLHL+
Sbjct: 40 VNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLENGHTLHLI 93
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +3
Query: 120 TIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
T+E+ K + +P NQQRLI+ G+ L+D +TL Y +Q + T+H+V
Sbjct: 39 TVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTIHMV 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 120 TIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
T+E+ K I +P NQQRLI+ G+ L+D +TL Y +Q + T+H+V
Sbjct: 39 TVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTVHMV 87
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 48.0 bits (109), Expect = 5e-06
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 257
L V+ SDTI+ +K+ I D+ G P +QQ L G +L++ T+SDYNI+ ++ L
Sbjct: 155 LEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYNIKPDANL 207
Score = 44.0 bits (99), Expect = 8e-05
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +3
Query: 105 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 200
V+ SDTI +KAK ++KEGIP QQRLIF G+
Sbjct: 66 VKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/56 (37%), Positives = 38/56 (67%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
+ E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y+I+++++L LV
Sbjct: 110 IHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIEQDASLQLV 165
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE + + ++K I G+ P +Q RL+F G+ L++ + LSDY++++ TL+LV
Sbjct: 25 LSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYHVEEGHTLYLV 81
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 263
+ ++ +T+ +K KI+ +GIP ++Q L GK LED DY I ES L L
Sbjct: 15 ITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESRLLL 69
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/56 (28%), Positives = 34/56 (60%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS ++ + L ++
Sbjct: 15 LDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALGVKDDDLLMMM 70
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 257
+ ++ +T+ +K KI+ +GIP ++Q L GK LED DY I ES L
Sbjct: 15 ITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESLL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3
Query: 117 DTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 263
DT+ K KI+ + IP ++Q + F GK LED + +++I + LHL
Sbjct: 21 DTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQNPLLHL 69
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 37.5 bits (83), Expect = 0.007
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 257
+ V PSDTI VK I+D +G P QQ LI GK L+D +L + + +E L
Sbjct: 15 IRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 37.5 bits (83), Expect = 0.007
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 257
+ V PSDTI VK I+D +G P QQ LI GK L+D +L + + +E L
Sbjct: 15 IRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 37.5 bits (83), Expect = 0.007
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 257
+ V PSDTI VK I+D +G P QQ LI GK L+D +L + + +E L
Sbjct: 15 IRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFL 70
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 37.5 bits (83), Expect = 0.007
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQD---KEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 257
+ V P+DTI VK I+D K+ P QQ LI GK L+D TL + + +E L
Sbjct: 15 IRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLVENKVTEEGFL 70
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L V +++ ++KAK K + ++ + GK+LED ++L++ N+Q S +HL+
Sbjct: 514 LTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQNVQPNSLVHLL 570
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 36.7 bits (81), Expect = 0.012
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 105 VEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
VE I VK +I K G + P++Q +++ G++LED ++D +S LHL+
Sbjct: 127 VERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLL 182
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 36.7 bits (81), Expect = 0.012
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 105 VEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
VE I VK +I K G + P++Q +++ G++LED ++D +S LHL+
Sbjct: 127 VERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLL 182
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 34.3 bits (75), Expect = 0.065
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 212
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 126 ENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
E +K +I ++ IP + QRLI G Q+ DG +S Q ++T++LV
Sbjct: 33 EQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS----QPDATVNLV 75
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/57 (26%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L V +++ +++AK K + ++ + GK+L+D ++L+ N+Q S +HL+
Sbjct: 675 LHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQNVQPNSLVHLI 731
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 117 DTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 263
DT+ +K KI+ + IP ++Q L+F G L+D + I S + L
Sbjct: 21 DTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCVILNHSRIQL 69
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 31.5 bits (68), Expect = 0.46
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 117 DTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 263
DT+ +K KI+ +G P ++Q LIF K L+D + I+ S + L
Sbjct: 22 DTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHNSRILL 70
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 31.5 bits (68), Expect = 0.46
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 117 DTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 263
DT+ +K KI+ +G P ++Q LIF K L+D + I+ S + L
Sbjct: 56 DTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHNSRILL 104
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 31.1 bits (67), Expect = 0.60
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKE---GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
L VE S + VK +I KE GIP + + L G++L+D R ++D ++ +HL+
Sbjct: 123 LVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDLCQNGDNVIHLL 180
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 117 DTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 212
DT+ +K KI+ + IP ++Q LIF G L+D
Sbjct: 21 DTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 99 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 212
+ ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 93 ISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to Chain A,
Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24
Replaced By Phe (Y24f) gi|999542
Length = 363
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -1
Query: 266 HQVEGGF--LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 147
H V+G LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 272 HAVKGRIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIVYGL 313
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Frame = +3
Query: 114 SDTIENVKAKI-----QDKEGIPP--NQQRLIFAGKQLEDGRTLSD 230
S T+ ++K K+ +DKE P N +LI AGK LE+ RTL++
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAE 73
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 114 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 239
S+ + ++K KI + IP N+Q+L L+D +L+ YN+
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNV 767
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +3
Query: 120 TIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG----RTLSDYNIQKESTL 257
T+ ++ ++ + G+ P +LIFAGK L+D TLS I++ S +
Sbjct: 22 TLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 363
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -1
Query: 245 LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 147
LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 281 LLDGGVRRGTDVFKALALGAQAVLIGRPIIYGL 313
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 108 EPSDTIENVKAKIQDKEG-IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 263
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 114 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 239
S+ + ++K KI + P N+Q+L L+D +L+ YN+
Sbjct: 367 SENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At2g25840.2 68415.m03101 tRNA synthetase class I (W and Y) family
protein contains Pfam profile: PF00579 tRNA synthetases
class I (W and Y)
Length = 412
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 539 LEGTYLFVVVFEDHRAVTLPAVVTVLHHRHEHSGAALLACAL 414
L+ TY + + DH A+TLP L + A LAC +
Sbjct: 92 LQDTYETLFIIVDHHAITLPYDTRQLGKATTDTAALYLACGI 133
>At2g25840.1 68415.m03100 tRNA synthetase class I (W and Y) family
protein contains Pfam profile: PF00579 tRNA synthetases
class I (W and Y)
Length = 408
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 539 LEGTYLFVVVFEDHRAVTLPAVVTVLHHRHEHSGAALLACAL 414
L+ TY + + DH A+TLP L + A LAC +
Sbjct: 92 LQDTYETLFIIVDHHAITLPYDTRQLGKATTDTAALYLACGI 133
>At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 368
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 242 LDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 147
LD VR GT +F+ L+ + +GR SLF L
Sbjct: 284 LDGGVRRGTDVFKALALGASGVFVGRPSLFSL 315
>At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial, putative / succinyl-CoA
synthetase, beta chain, putative / SCS-beta, putative
identical to SP|O82662 Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, beta chain) (SCS- beta)
{Arabidopsis thaliana}; similar to SP|O97580
Succinyl-CoA ligase [ADP-forming] beta-chain,
mitochondrial precursor (EC 6.2.1.5) {Sus scrofa};
contains Pfam profiles PF00549: CoA-ligase, PF02222:
ATP-grasp domain
Length = 421
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 114 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 266
+ ++E VK IQD + PN+ L+ + L GR L + + +H+V
Sbjct: 51 ASSLEEVKKAIQD---VFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIV 98
>At1g78020.1 68414.m09092 senescence-associated protein-related
similar to senescence-associated protein SAG102
(GI:22331931) [Arabidopsis thaliana]
Length = 162
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 154 KRESLPINRG*SLLESSWKMDVPSRTTISRRNPPS 258
KR+ PINR SL E + +++PS + S + P+
Sbjct: 5 KRQRPPINRTTSLSEIKFDLNLPSESEPSNQQKPT 39
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,492,838
Number of Sequences: 28952
Number of extensions: 237497
Number of successful extensions: 844
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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