Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_G16
         (759 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   4.4  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   5.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.9  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/46 (23%), Positives = 20/46 (43%)
 Frame = +3

Query: 312 KGSIERTKSKLDKLFALRTVLRKFYEFNDIRNEFKNLFSCSYILAM 449
           + S  R  S    L+        + + ND+ + F N F CS  +++
Sbjct: 331 RNSTTRQNSTTTALYRYNFAKADYVKLNDMISMFNNSFHCSNFISL 376


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 375 RKFYEFNDIRNEFKN 419
           R+F + NDIRN FK+
Sbjct: 66  RQFTKVNDIRNRFKD 80


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = -3

Query: 361  RANNLSSFDLVLSIDPLLPIIFVSKY 284
            R+NN+ +FD +L  D  + +I+++ +
Sbjct: 1635 RSNNVQTFDAMLLYDVNMKVIYLTDF 1660


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = -3

Query: 361  RANNLSSFDLVLSIDPLLPIIFVSKY 284
            R+NN+ +FD +L  D  + +I+++ +
Sbjct: 1636 RSNNVQTFDAMLLYDVNMKVIYLTDF 1661


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,283
Number of Sequences: 2352
Number of extensions: 12216
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)