Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_G14
(470 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 159 4e-38
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 133 2e-30
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 127 1e-28
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 105 5e-22
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 101 1e-20
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 97 1e-19
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 90 3e-17
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 89 6e-17
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 82 5e-15
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 80 2e-14
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 79 6e-14
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 76 5e-13
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 71 1e-11
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 71 1e-11
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 71 2e-11
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 69 7e-11
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 66 5e-10
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 66 5e-10
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 65 6e-10
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 62 8e-09
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 61 1e-08
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 60 2e-08
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 60 2e-08
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 58 7e-08
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 56 5e-07
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 51 1e-05
UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1; Encepha... 47 2e-04
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 46 3e-04
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 44 0.001
UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoe... 40 0.028
UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillar... 38 0.11
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 36 0.59
UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma brucei... 35 1.0
UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.0
UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus buty... 34 1.8
UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;... 33 3.2
UniRef50_UPI000038D597 Cluster: COG2319: FOG: WD40 repeat; n=2; ... 32 5.5
UniRef50_Q0UBN7 Cluster: Putative uncharacterized protein; n=1; ... 32 5.5
UniRef50_Q2FTZ5 Cluster: Putative uncharacterized protein; n=1; ... 32 5.5
UniRef50_A1ZKV6 Cluster: Putative uncharacterized protein; n=1; ... 31 9.7
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 159 bits (385), Expect = 4e-38
Identities = 79/110 (71%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
Frame = +1
Query: 55 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 231
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 232 HAQYEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 381
HA YEKR MELLKVSKD RALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 60 HAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 133 bits (321), Expect = 2e-30
Identities = 70/109 (64%), Positives = 82/109 (75%)
Frame = +1
Query: 55 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 234
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 235 AQYEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 381
A YE+RAMELLKVSKD RALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 51 APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 127 bits (307), Expect = 1e-28
Identities = 60/77 (77%), Positives = 65/77 (84%)
Frame = +1
Query: 151 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDXRALKFLKRRLGTHIR 330
R P RLKG+QTKH+KFVRD++REVVGH EKR ELLKV KD RALKFLKRRLGTHIR
Sbjct: 3 RFEPERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXKDKRALKFLKRRLGTHIR 62
Query: 331 AKRKREELSNVLAQMRK 381
AKRKREELSN+L QM K
Sbjct: 63 AKRKREELSNILTQMGK 79
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 105 bits (252), Expect = 5e-22
Identities = 54/103 (52%), Positives = 71/103 (68%)
Frame = +1
Query: 73 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 252
+AVGL KGH T++ ++ R R KG+ +K +K VR+LVRE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 253 AMELLKVSKDXRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 381
+E+L++SKD RALKFLKRR+GTH RAK KREEL NV+ RK
Sbjct: 59 VLEMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRK 101
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 101 bits (241), Expect = 1e-20
Identities = 55/106 (51%), Positives = 68/106 (64%)
Frame = +1
Query: 61 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 240
P+ + VG+ KGH TK + + RP+ KG TK FVR L+REVVG A
Sbjct: 6 PKSGLFVGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAP 55
Query: 241 YEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREELSNVLAQMR 378
YEKR ELLKV KD RALK KR+LGTH RAK+KREE++ V+ +MR
Sbjct: 56 YEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVIRKMR 101
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 97.5 bits (232), Expect = 1e-19
Identities = 54/100 (54%), Positives = 65/100 (65%)
Frame = +1
Query: 79 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 258
VGL KGH T+ + + RP KG +K + F+R L+REV G A YEKR
Sbjct: 12 VGLNKGHVVTR----------RELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRIT 61
Query: 259 ELLKVSKDXRALKFLKRRLGTHIRAKRKREELSNVLAQMR 378
ELLKV KD RALK KR+LGTH RAKRKREE+S+VL +MR
Sbjct: 62 ELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 89.8 bits (213), Expect = 3e-17
Identities = 53/116 (45%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
Frame = +1
Query: 43 QSEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVRE 222
+ +I APR IAVGL KGH TT I + +RP+R KGL+TK + V +++RE
Sbjct: 6 EMKIEAPRSGIAVGLNKGHITTPIPLVKS--------VRPSRKKGLKTKRNALVSEVIRE 57
Query: 223 VVGHAQYEKRAMELLK---VSKDXRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 381
V G A YE+ +EL+K S RALKF K+RLGT RAK K +E+ V+ RK
Sbjct: 58 VCGFAPYERHMIELIKTGSASAQKRALKFAKKRLGTLRRAKTKNDEMMRVVELQRK 113
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 88.6 bits (210), Expect = 6e-17
Identities = 51/124 (41%), Positives = 70/124 (56%)
Frame = +1
Query: 10 DETSVLFLRICQSEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTK 189
++ S + S A R + G+ KG TT I RP+ KGL+T+
Sbjct: 81 EKNSSTMADVDMSSAPAQRSNLRYGMNKGRPTTVIPK----------TARPSNKKGLKTE 130
Query: 190 HSKFVRDLVREVVGHAQYEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREELSNVLA 369
FVR ++REV G + YEKR MELL+ SKD +A K K+RLGT +R+KRK EELS V+
Sbjct: 131 KKTFVRSVIREVAGFSPYEKRVMELLRNSKDKKAKKLTKKRLGTLLRSKRKIEELSAVIV 190
Query: 370 QMRK 381
+ R+
Sbjct: 191 EQRR 194
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 82.2 bits (194), Expect = 5e-15
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = +1
Query: 127 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDXRALKFLK 306
K +T + + RP+R KG +K + FVR +VREV G A YE+R MEL++ S+D RA K K
Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAK 72
Query: 307 RRLGTHIRAKRKREELSNVLAQMR 378
+RLGT RAK K EEL++V+ R
Sbjct: 73 KRLGTLKRAKGKIEELTSVIQSSR 96
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 80.2 bits (189), Expect = 2e-14
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = +1
Query: 181 QTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREELSN 360
Q+ + VR ++ EV G A YEKR +ELL++ KD RALKF K+RLGTH+RAKRKRE+++
Sbjct: 28 QSPRLQVVRSVINEVCGFAPYEKRVIELLRIGKDKRALKFAKKRLGTHLRAKRKREQMAE 87
Query: 361 VLAQMR 378
L R
Sbjct: 88 ALRSKR 93
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 78.6 bits (185), Expect = 6e-14
Identities = 50/109 (45%), Positives = 64/109 (58%)
Frame = +1
Query: 55 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 234
MA +A+GL KGHK K + K + P RL TKH+KFV+D++REV
Sbjct: 1 MALHCPMAMGLDKGHKVMKNISKPKHSS-------PHRLL---TKHTKFVQDMIREVCDF 50
Query: 235 AQYEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 381
Y+ + L KVS D A KF+K+R+G HI KRK EELS V+A MRK
Sbjct: 51 MSYDWCTVVLPKVSNDKCAFKFIKKRVGMHIHTKRKWEELSIVIAAMRK 99
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 75.8 bits (178), Expect = 5e-13
Identities = 44/109 (40%), Positives = 66/109 (60%)
Frame = +1
Query: 55 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 234
M + IA+GL KG K T ++ K I+ K KG + +KFVR LVRE+ G
Sbjct: 1 MTVKTGIAIGLNKGKKVTSMTPAPK-ISYK---------KGAASNRTKFVRSLVREIAGL 50
Query: 235 AQYEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 381
+ YE+R ++L++ S + RA K K+RLG+ RAK K EE++N++A R+
Sbjct: 51 SPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASRR 99
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 71.3 bits (167), Expect = 1e-11
Identities = 32/46 (69%), Positives = 41/46 (89%)
Frame = +1
Query: 244 EKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 381
++RAMELLKVSKD R L+ +K+R+GTH+RAKR+ EELSNVLA +RK
Sbjct: 56 QRRAMELLKVSKDKRTLRLIKKRVGTHVRAKRETEELSNVLAAIRK 101
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 71.3 bits (167), Expect = 1e-11
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Frame = +1
Query: 61 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 240
P IAVG GH TK S +K I K++ K+ + D+VRE+ G +
Sbjct: 9 PSTGIAVGFNSGHIVTKRSV-KKSIKKKSV-----------PKNKDLINDVVREIAGFSP 56
Query: 241 YEKRAMELLKVSKDX---RALKFLKRRLGTHIRAKRKREELSNVLAQMRK 381
YEKR +EL+KV R+LK+ K++LGTH R K KREE+ ++ R+
Sbjct: 57 YEKRLIELIKVGTSAATKRSLKYAKKKLGTHKRGKAKREEIQKIVMMQRR 106
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 70.5 bits (165), Expect = 2e-11
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +1
Query: 112 ISAGRKGITDKAIRIRPARLKGLQTKHS-KFVRDLVREVVGHAQYEKRAMELLKVSKDXR 288
++ G+KG T + R + G KH+ +F +D+++EV A E+ A E KVSKD +
Sbjct: 16 LNKGQKG-TKVMTQPRHSCGLGHLIKHTTEFSQDVIQEVFSFALNEQHATEQFKVSKDKQ 74
Query: 289 ALKFLKRRLGTHIRAKRKREELSNVLAQMRK 381
ALKF+++ LGTHI AKRK ELSNVLA R+
Sbjct: 75 ALKFIQKMLGTHICAKRKARELSNVLATTRE 105
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 68.5 bits (160), Expect = 7e-11
Identities = 41/96 (42%), Positives = 54/96 (56%)
Frame = +1
Query: 61 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 240
P + VGL KGH TK K + RP+ KG +K + FVR+L+REV G
Sbjct: 6 PNTGLFVGLNKGHIVTK----------KELAPRPSDRKGKTSKRTHFVRNLIREVAGFXP 55
Query: 241 YEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKRE 348
YEKR ELLKV KD RALK + ++G H + ++ E
Sbjct: 56 YEKRITELLKVGKDKRALKVRQEKVG-HSQESKEEE 90
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 65.7 bits (153), Expect = 5e-10
Identities = 41/111 (36%), Positives = 59/111 (53%)
Frame = +1
Query: 49 EIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVV 228
E PR I G KG+KTT+ A R D+ L K + V+ ++ ++V
Sbjct: 7 EAPVPRTGIIAGFNKGYKTTR-RARRPSSNDRY---------ALPHKKLRAVKAIISDLV 56
Query: 229 GHAQYEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 381
G + E+R ELL+V KD RALKF K+RLG+ AK++R ++ L Q K
Sbjct: 57 GFSPMERRVQELLRVGKDKRALKFCKKRLGSIKAAKKRRAKVEEALRQQTK 107
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 65.7 bits (153), Expect = 5e-10
Identities = 45/109 (41%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Frame = +1
Query: 64 RFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQY 243
R IAVGL +G T+ + T K +R RP++ KG K VR +++EV G + Y
Sbjct: 3 RTGIAVGLNRGFITSSL-------TKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPY 55
Query: 244 EKRAMELLKVS--KD-XRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 381
EKR +EL K + KD +A K +RLGT+ R KRK E + N+ MRK
Sbjct: 56 EKRIIELFKTNQPKDLKKAGKLAAKRLGTNRRGKRKIELVQNLYRAMRK 104
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 65.3 bits (152), Expect = 6e-10
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Frame = +1
Query: 184 TKHSKFVRDLVREVVGHAQYEKRAMELLKV---SKDXRALKFLKRRLGTHIRAKRKREEL 354
+K + ++D+VRE+ G + YEKR +EL+K+ + R+LK+ K++LGTH R K KREE+
Sbjct: 56 SKRKELIKDVVREITGFSPYEKRIIELIKIGTSASTKRSLKYAKKKLGTHKRGKAKREEI 115
Query: 355 SNVLAQMRK 381
V+ R+
Sbjct: 116 QKVVILQRR 124
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 61.7 bits (143), Expect = 8e-09
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = +1
Query: 172 KGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREE 351
K + TK +RD++RE+ G + YE+R ELLK D RALK K+RLG+ K+KR++
Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLGSIQAGKKKRDD 94
Query: 352 LSNV 363
++N+
Sbjct: 95 IANI 98
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 61.3 bits (142), Expect = 1e-08
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = +1
Query: 265 LKVSKDXRALKFLKRRLGTHIRAKRKREELSN 360
LKVSKD RALKF+K+R+GTHIRAKRKREELSN
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 60.5 bits (140), Expect = 2e-08
Identities = 36/107 (33%), Positives = 54/107 (50%)
Frame = +1
Query: 61 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 240
PR I G KGH TT+ + + P + KH + V+ ++ ++VG +
Sbjct: 6 PRTGIIAGFNKGHVTTR----------RPRQPSPNDRFAVPHKHLRAVKAIIADLVGLSP 55
Query: 241 YEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 381
EKR E L+V K+ RALK+ K+RLG AK+KR ++ L K
Sbjct: 56 LEKRVQEFLRVGKEKRALKYCKKRLGDFTAAKKKRSKMEEALRHATK 102
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 60.1 bits (139), Expect = 2e-08
Identities = 26/56 (46%), Positives = 40/56 (71%)
Frame = +1
Query: 190 HSKFVRDLVREVVGHAQYEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREELS 357
H +FV+ +++E G A YE +ELL+++KD AL++ K+RLG RAK KR++LS
Sbjct: 29 HQEFVKSIIQECTGMAPYEMHIIELLRMNKDRHALRYAKKRLGNIKRAKAKRDQLS 84
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 58.4 bits (135), Expect = 7e-08
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +1
Query: 154 IRPARLKGLQT--KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDXRALKFLKRRLGTHI 327
+ P R GL + K F R +V E+VG YE+ M+L+K+ + A +FLK+RLGTH
Sbjct: 11 LAPKRECGLHSSGKRVNFARKIVHELVGWQPYERHTMDLIKIERRRAARQFLKKRLGTHR 70
Query: 328 RAKRKREELSNVLAQ 372
RA +K L V+ +
Sbjct: 71 RAMKKLNTLEEVVQE 85
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 55.6 bits (128), Expect = 5e-07
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Frame = +1
Query: 103 TTKISAGRKGITDKAIRIRPARLKG---LQTKHSKFVRDLVREVVGHAQYEKRAMELLKV 273
T + G K + I+ R RL +QTK +K VRDL+ EVV HA ++K+ M+LLKV
Sbjct: 9 TNRHKLGNKSYKLRQIQYREDRLSRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQLLKV 68
Query: 274 SKDXRALKFLKRRLGTHIRA 333
+D AL+F+ +HIRA
Sbjct: 69 FQDKLALRFMSG--PSHIRA 86
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 51.2 bits (117), Expect = 1e-05
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = +1
Query: 73 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 252
+A+GL KG + TK A ++R R +G TK +K VR+LVRE+ G A YE+R
Sbjct: 10 LAIGLEKGVRVTK----------NARKMRQNRKRGAATKKTKVVRELVREITGFAPYERR 59
Query: 253 AMELLKV 273
MELL V
Sbjct: 60 MMELLLV 66
>UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L36
- Encephalitozoon cuniculi
Length = 107
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +1
Query: 181 QTKHSKFVRDLVR-EVVGHAQYEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREELS 357
+T+ S+F+ V E+ G + EK+A+ LL+ + +A K L++RLG+H RA K E+L+
Sbjct: 42 ETQESRFLAAAVADEISGLSPLEKKAISLLEAKNNNKAQKLLRKRLGSHKRAVAKVEKLA 101
Query: 358 NVLAQ 372
+L +
Sbjct: 102 RMLLE 106
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 46.4 bits (105), Expect = 3e-04
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +1
Query: 139 DKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSK 279
+K ++R ++ G TKH+KF+ + RE+ G A YE RA ELLKVSK
Sbjct: 70 NKGHKVRHSQCHGSLTKHTKFMWGVNREMCGFASYEWRATELLKVSK 116
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 44.4 bits (100), Expect = 0.001
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 271 VSKDXRALKFLKRRLGTHIRAKRKREELSNVLAQMR 378
V+K L+ R+LGTH RAKRKREE+SNVL +MR
Sbjct: 20 VTKRELPLRPSSRKLGTHKRAKRKREEMSNVLRKMR 55
>UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L36 - Entamoeba
histolytica
Length = 103
Score = 39.9 bits (89), Expect = 0.028
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +1
Query: 184 TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREELSNV 363
TK V D++RE G YE+ M+LL+ D +AL + K+ + + E SNV
Sbjct: 25 TKRKHVVNDVIREACGFPAYERHMMDLLRRGLDKKALNYAKKTSWYTQKRTCQAEMKSNV 84
Query: 364 LAQMRK 381
L + K
Sbjct: 85 LLEAIK 90
>UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillardia
theta|Rep: 60S ribosomal protein L36 - Guillardia theta
(Cryptomonas phi)
Length = 75
Score = 37.9 bits (84), Expect = 0.11
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 181 QTKHSKF-VRDLVREVVGHAQYEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREELS 357
+T KF + ++ G ++EK+ +K+ + +ALK K++LG RAK+K + ++
Sbjct: 9 KTNFKKFNINVVLTSTFGLNEFEKKITNYIKLGYEQKALKMSKKKLGNLQRAKKKIDSIN 68
Query: 358 NVL 366
++L
Sbjct: 69 HIL 71
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 35.5 bits (78), Expect = 0.59
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = +1
Query: 34 RICQSEIMAPRFEIAVGLRK--GHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVR 207
R C+S+ A F++ RK KT + + G++ I D ++ + K + K+ R
Sbjct: 30 RFCRSKCHA-NFKMKRQPRKLKWTKTHRAARGKEMIVDSSLVLSQFAKK--RNTPVKYDR 86
Query: 208 DLVREVVGHAQYEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREELSNVLAQ 372
+LV + +AME ++ + R F KRRLG + +RKREE V+A+
Sbjct: 87 NLVAATI-------KAMERVEEIRARRERAFTKRRLGGKLARERKREEDRRVVAE 134
>UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma
brucei|Rep: PTGT-4 protein - Trypanosoma brucei
Length = 508
Score = 34.7 bits (76), Expect = 1.0
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2
Query: 412 NGDGDEPGRLPSSSERARC*VLHASSWRGCVCPIVASRTS 293
+G GD P + P SS + RC L SSWR I +RT+
Sbjct: 99 HGKGDRPSQKPKSSSQKRCRHLSGSSWREPRRTIAPARTA 138
>UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 208
Score = 34.7 bits (76), Expect = 1.0
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 55 MAPRFEIAVGLRKGHKTTK 111
MAP+ E+AVGL+KGHK TK
Sbjct: 155 MAPKVEMAVGLQKGHKVTK 173
>UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus
butylicus DSM 5456|Rep: Predicted Rad50 - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 887
Score = 33.9 bits (74), Expect = 1.8
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 163 ARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDXRALKFLKRRL----GTHIR 330
ARL+ L+T+ +K + H +YE+ EL K+ + + LKRRL +
Sbjct: 532 ARLEELRTEQAKLSERRLELFEKHKEYEEARKELEKLGQAVVEYRVLKRRLEELEKRRVE 591
Query: 331 AKRKREEL 354
A+R REEL
Sbjct: 592 AERLREEL 599
>UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8461-PA - Tribolium castaneum
Length = 235
Score = 33.1 bits (72), Expect = 3.2
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +1
Query: 187 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREEL 354
K KFV DL + Q + + ++ LK ++D + +KF+ RRL IR + K+E L
Sbjct: 112 KDYKFVNDLRK------QEKTQLLKQLKETEDKKKIKFVIRRLENQIREEEKKERL 161
>UniRef50_UPI000038D597 Cluster: COG2319: FOG: WD40 repeat; n=2;
Nostoc punctiforme PCC 73102|Rep: COG2319: FOG: WD40
repeat - Nostoc punctiforme PCC 73102
Length = 1174
Score = 32.3 bits (70), Expect = 5.5
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Frame = +1
Query: 43 QSEIM--APRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLV 216
Q+EI+ P E+ L + + G+T + + + + +QT + +R +
Sbjct: 368 QTEILPQVPWRELLEALESLKGRSLVETAATGLTQQPVIMEYVTEQFIQTIEREMIRGEL 427
Query: 217 REVVGHAQYEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREE-LSNVLAQMR 378
HA E + + ++ ++ L L RL TH + + EE L +LAQ+R
Sbjct: 428 NLFKNHALIEAQTQDYVREAQIQFILHPLVERLFTHFDTQAQLEEQLCKILAQLR 482
>UniRef50_Q0UBN7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 723
Score = 32.3 bits (70), Expect = 5.5
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = -1
Query: 353 SSSRFLLARMCVPNRRFKNFR--ARXSFDTLSNSIALFSY 240
++S L+ R CV RF+ FR +R +FDTLS L SY
Sbjct: 489 TNSHDLIMRTCVTYLRFRPFRIDSRNTFDTLSARYPLLSY 528
>UniRef50_Q2FTZ5 Cluster: Putative uncharacterized protein; n=1;
Methanospirillum hungatei JF-1|Rep: Putative
uncharacterized protein - Methanospirillum hungatei
(strain JF-1 / DSM 864)
Length = 540
Score = 32.3 bits (70), Expect = 5.5
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 205 RDLVREVVGHAQYEKRAMELLKVSKDXRALKFLKRRLGTHIRAKRKREELSNVLAQM 375
R+L+ ++G + A+ LLK D + F + R+ H+ A K EE++N+LA++
Sbjct: 62 RELLLTLLGD---HEEAIHLLKEIDDLKKSPFSQFRIARHLGALGKHEEMNNLLARL 115
>UniRef50_A1ZKV6 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 292
Score = 31.5 bits (68), Expect = 9.7
Identities = 25/84 (29%), Positives = 45/84 (53%)
Frame = +1
Query: 130 GITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDXRALKFLKR 309
G D+ I+ R ++KGL TK+SK ++LV + A++ LKV K + LK ++
Sbjct: 55 GQLDRVIQERETQVKGLTTKNSKRKQELVEAI--------NALKGLKVEKQ-KLLKNVQT 105
Query: 310 RLGTHIRAKRKREELSNVLAQMRK 381
H R+ +L++ + ++RK
Sbjct: 106 LKREHNINLRRITDLNSKIVKLRK 129
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,218,669
Number of Sequences: 1657284
Number of extensions: 6748791
Number of successful extensions: 16375
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 16147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16360
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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