Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_G13
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   6.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   6.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   6.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   6.5  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 347 IYINFRELK*DIFLIFINCK*IFC*KIYLLSTMYYL 454
           I  NF+E + + ++  +    +FC  IYL  T+YY+
Sbjct: 125 INYNFKESERNDYVSLLQLVFVFCYFIYLF-TVYYI 159


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 95  NEDSRHGSPKVRTLGEHIAPSVRXRHTISA 6
           N D R    +V  LGE++      RH IS+
Sbjct: 329 NNDKRKSRGEVDGLGENMMDMSLTRHQISS 358


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 488 SLFSWLNIILYCNFXLVNY 544
           S+F+++ +ILYC +    Y
Sbjct: 325 SIFTYVPMILYCVYTTATY 343


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 488 SLFSWLNIILYCNFXLVNY 544
           S+F+++ +ILYC +    Y
Sbjct: 50  SIFTYVPMILYCVYTTATY 68


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 95  NEDSRHGSPKVRTLGEHIAPSVRXRHTISA 6
           N D R    +V  LGE++      RH IS+
Sbjct: 329 NNDKRKSRGEVDGLGENMMDMSLTRHQISS 358


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,209
Number of Sequences: 336
Number of extensions: 2878
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)