Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_G13
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74043-5|CAA98544.1|  588|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AF039050-11|AAC47941.1|  333|Caenorhabditis elegans Seven tm rec...    28   8.9  

>Z74043-5|CAA98544.1|  588|Caenorhabditis elegans Hypothetical
           protein T19B10.9 protein.
          Length = 588

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 619 FHLRMLSYKSTNSITIFFCLMTSSYIVY 536
           FHL M  Y+ +N IT+  CL T  Y  Y
Sbjct: 510 FHLTMDIYRRSNDITLQICLDTPFYCPY 537


>AF039050-11|AAC47941.1|  333|Caenorhabditis elegans Seven tm
           receptor protein 83 protein.
          Length = 333

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +3

Query: 393 LLIVNEYFVRRYTYYLLCTIYAHSK*RNILILVCF 497
           +L++  YF+  YTY+L  T +   +  + +++V F
Sbjct: 60  ILVLPSYFIYEYTYFLFTTQFTQYQNMSQILIVTF 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,358,394
Number of Sequences: 27780
Number of extensions: 219181
Number of successful extensions: 386
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)